RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 RPL36ALQ969Q0 106 aaKnown RBP10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
RPRD1A-208ENST00000589050 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
RPRD1A-208ENST00000589050 LINC00694P0DN24 101 aa10.71□□□□□ -0.69
RPRD1A-208ENST00000589050 CCL18P55774 89 aa10.7□□□□□ -0.7
RPRD1A-208ENST00000589050 ESRGQ1W209 222 aa10.7□□□□□ -0.7
RPRD1A-208ENST00000589050 UBE2DNLQ8IWF7 75 aa10.7□□□□□ -0.7
RPRD1A-208ENST00000589050 ATP6V0E2Q8NHE4 81 aa10.7□□□□□ -0.7
RPRD1A-208ENST00000589050 FRZBQ92765 325 aa10.7□□□□□ -0.7
RPRD1A-208ENST00000589050 MRAP2Q96G30 205 aa10.7□□□□□ -0.7
RPRD1A-208ENST00000589050 TNFRSF18Q9Y5U5 241 aa10.7□□□□□ -0.7
RPRD1A-208ENST00000589050 UBE2D3P61077 147 aa10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 UBE2D2P62837 147 aa10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 MRPL51Q4U2R6 128 aaKnown RBP10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 LGALS9CQ6DKI2 356 aa10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 LINC00476Q8WZB0 136 aa10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 DNAJC30Q96LL9 226 aa10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 NIT2Q9NQR4 276 aa10.69□□□□□ -0.7
RPRD1A-208ENST00000589050 SMKR1H3BMG3 65 aa10.68□□□□□ -0.7
RPRD1A-208ENST00000589050 LY6G6CO95867 125 aa10.68□□□□□ -0.7
RPRD1A-208ENST00000589050 NCR2O95944 276 aa10.68□□□□□ -0.7
RPRD1A-208ENST00000589050 RPL39LQ96EH5 51 aaKnown RBP10.68□□□□□ -0.7
RPRD1A-208ENST00000589050 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
RPRD1A-208ENST00000589050 TGIF2-C20orf24A0A0A6YYL0 155 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 GAS8-AS1O95177 125 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 ELOBQ15370 118 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 OR10J3Q5JRS4 329 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 CBLN2Q8IUK8 224 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 SMCO4Q9NRQ5 59 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 TENM2Q9NT68 2774 aa10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 PLECQ15149 4684 aaKnown RBP10.67□□□□□ -0.7
RPRD1A-208ENST00000589050 IGHV3-38A0A0C4DH36 116 aa10.66□□□□□ -0.7
RPRD1A-208ENST00000589050 CKS2P33552 79 aa10.66□□□□□ -0.7
RPRD1A-208ENST00000589050 RPS10P46783 165 aaKnown RBP10.66□□□□□ -0.7
RPRD1A-208ENST00000589050 TMEM136Q6ZRR5 245 aa10.66□□□□□ -0.7
RPRD1A-208ENST00000589050 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.66□□□□□ -0.7
RPRD1A-208ENST00000589050 TIRAPP58753 221 aa10.65□□□□□ -0.7
RPRD1A-208ENST00000589050 MRPS16Q9Y3D3 137 aaKnown RBP10.65□□□□□ -0.7
RPRD1A-208ENST00000589050 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 LCE6AA0A183 80 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 D6R8Y8 96 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 PPP1R17O96001 155 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 HLA-DQA1P01909 254 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 COX19Q49B96 90 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 DAZ4Q86SG3 579 aaKnown RBP10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 YPEL4Q96NS1 127 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 GNB1LQ9BYB4 327 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 ST20Q9HBF5 79 aa10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 DAZ3Q9NR90 486 aaKnown RBP10.64□□□□□ -0.71
RPRD1A-208ENST00000589050 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
RPRD1A-208ENST00000589050 ATP6V1G1O75348 118 aa10.63□□□□□ -0.71
RPRD1A-208ENST00000589050 PPBPP02775 128 aa10.63□□□□□ -0.71
RPRD1A-208ENST00000589050 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
RPRD1A-208ENST00000589050 NRACQ8N912 160 aa10.63□□□□□ -0.71
RPRD1A-208ENST00000589050 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
RPRD1A-208ENST00000589050 APCSP02743 223 aa10.62□□□□□ -0.71
RPRD1A-208ENST00000589050 LELP1Q5T871 98 aa10.62□□□□□ -0.71
RPRD1A-208ENST00000589050 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
RPRD1A-208ENST00000589050 TRAV8-6A0A0B4J262 113 aa10.61□□□□□ -0.71
RPRD1A-208ENST00000589050 TNFRSF6BO95407 300 aa10.61□□□□□ -0.71
RPRD1A-208ENST00000589050 MT-ND6P03923 174 aa10.61□□□□□ -0.71
RPRD1A-208ENST00000589050 S100A1P23297 94 aa10.61□□□□□ -0.71
RPRD1A-208ENST00000589050 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
RPRD1A-208ENST00000589050 ALMS1Q8TCU4 4167 aa10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 SCO1O75880 301 aa10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 NPYP01303 97 aa10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 SUMO2P61956 95 aaKnown RBP10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 KIAA1644Q3SXP7 199 aa10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 TMEM97Q5BJF2 176 aa10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 TMEM70Q9BUB7 260 aa10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 MRPL18Q9H0U6 180 aaKnown RBP10.6□□□□□ -0.71
RPRD1A-208ENST00000589050 TRBV6-8A0A0A6YYG3 113 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 I3L3M4 83 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 PMCHP20382 165 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 COTL1Q14019 142 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 C20orf78Q9BR46 151 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 Q9H8V8 135 aa10.59□□□□□ -0.71
RPRD1A-208ENST00000589050 PHOX2AO14813 284 aa10.58□□□□□ -0.72
RPRD1A-208ENST00000589050 SIVA1O15304 175 aa10.58□□□□□ -0.72
RPRD1A-208ENST00000589050 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
RPRD1A-208ENST00000589050 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
RPRD1A-208ENST00000589050 LAMTOR2Q9Y2Q5 125 aa10.58□□□□□ -0.72
RPRD1A-208ENST00000589050 TRAPPC1Q9Y5R8 145 aa10.58□□□□□ -0.72
RPRD1A-208ENST00000589050 LYSTQ99698 3801 aa10.57□□□□□ -0.72
RPRD1A-208ENST00000589050 IGLV2-18A0A075B6J9 118 aa10.57□□□□□ -0.72
RPRD1A-208ENST00000589050 IGHV1-24A0A0C4DH33 117 aa10.57□□□□□ -0.72
RPRD1A-208ENST00000589050 TRBV27A0A0K0K1C4 114 aa10.57□□□□□ -0.72
RPRD1A-208ENST00000589050 VCYO14598 125 aa10.57□□□□□ -0.72
RPRD1A-208ENST00000589050 TRBV25-1A0A075B6N4 114 aa10.56□□□□□ -0.72
RPRD1A-208ENST00000589050 IQCJQ1A5X6 159 aa10.56□□□□□ -0.72
RPRD1A-208ENST00000589050 CHCHD5Q9BSY4 110 aa10.56□□□□□ -0.72
RPRD1A-208ENST00000589050 TSHBP01222 138 aa10.55□□□□□ -0.72
RPRD1A-208ENST00000589050 AMTP48728 403 aa10.55□□□□□ -0.72
RPRD1A-208ENST00000589050 RPL32P62910 135 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms