RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 HRNRQ86YZ3 2850 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 MEIS3P1A6NDR6 274 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 NCR2O95944 276 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 CD28P10747 220 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 ATP6V0CP27449 155 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 RAB14P61106 215 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 LY6EQ16553 131 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 RPL39P5Q59GN2 51 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM201AQ5SY85 155 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM222AQ5U5X8 452 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 RASL11AQ6T310 242 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 SFTA2Q6UW10 78 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 LINC00322Q6ZN03 302 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 ZFP2Q6ZN57 461 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF767PQ75MW2 155 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TMED4Q7Z7H5 227 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 KCNRGQ8N5I3 272 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 ANKRD29Q8N6D5 301 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 OR8A1Q8NGG7 326 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 MBD3L1Q8WWY6 194 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 WDR61Q9GZS3 305 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 U3KQK5 164 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TACC2O95359 2948 aa1.32□□□□□ -2.2
SMCHD1-211ENST00000584897 TRAV21A0A0B4J279 112 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 C7orf71A4D174 169 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 F2Z2F3 143 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TMEM250H0YL14 139 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 H3BMM0 161 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 BCL2L11O43521 198 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 IFNA7P01567 189 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 SPART-AS1P0CW21 52 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 P0DMU3 169 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM231AP0DMU4 169 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM231CP0DMU5 169 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 DDTP30046 118 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 DSCR10P59022 87 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 NDUFA5Q16718 116 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 LUZP6Q538Z0 58 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TMEM78Q5T7P6 136 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 IL34Q6ZMJ4 242 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 NIT1Q86X76 327 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 FXYD5Q96DB9 178 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 SIGMAR1Q99720 223 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF331Q9NQX6 463 aaPredicted RBP1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 NOTCH3Q9UM47 2321 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 LAMTOR2Q9Y2Q5 125 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 LRP1BQ9NZR2 4599 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 IGHV3-43A0A0B4J1X8 118 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TRBV10-1A0A0K0K1A3 114 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 IGKV1-5P01602 117 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 C1QBP02746 253 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TFF1P04155 84 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 G6PCP35575 357 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 CTRLP40313 264 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 KRTAP10-12P60413 245 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 DAZ2Q13117 558 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 SPRNQ5BIV9 151 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 OR8I2Q8N0Y5 310 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TP53RKQ96S44 253 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 IMMP2LQ96T52 175 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 RHPN1-AS1Q9BWJ2 59 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 C11orf1Q9H5F2 150 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF492Q9P255 531 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 LINC00527Q9UJ94 153 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 PLECQ15149 4684 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 A8MWV9 139 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 C9JCJ5 164 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 MPC2O95563 127 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 CTSGP08311 255 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TRGC1P0CF51 173 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 RPL30P62888 115 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 SP6Q3SY56 376 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 EIF4E3Q8N5X7 224 aaKnown RBP1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 Q8N976 141 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TSKUQ8WUA8 353 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 GSKIPQ9P0R6 139 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 PLXNB1O43157 2135 aa1.31□□□□□ -2.2
SMCHD1-211ENST00000584897 TNXBP22105 4242 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 IGSF23A1L1A6 192 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 LINC00862A6NCI5 91 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 LY6HO94772 140 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 PFN1P07737 140 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 METTL15P1P0C7V9 234 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 GATA2P23769 480 aaPredicted RBP1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 PEA15Q15121 130 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 LTC4SQ16873 150 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 TOMM20LQ6UXN7 152 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 DAZ4Q86SG3 579 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 TMEM263Q8WUH6 116 aaKnown RBP1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 CELA1Q9UNI1 258 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 IGKV2D-24A0A075B6R9 120 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 BPY2O14599 106 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 LINC00869P0C866 280 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 CXCL3P19876 107 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 FGF7P21781 194 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 CRYBA4P53673 196 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 EMP1P54849 157 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 WT1-ASQ06250 92 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 ZFAND6Q6FIF0 208 aa1.3□□□□□ -2.2
SMCHD1-211ENST00000584897 AKAP14Q86UN6 197 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms