RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 DPH3P1Q9H4G8 78 aa18.29■□□□□ 0.52
SMARCD2-210ENST00000584400 DAZ3Q9NR90 486 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-210ENST00000584400 A8MWL6 223 aa18.28■□□□□ 0.52
SMARCD2-210ENST00000584400 TWIST1Q15672 202 aa18.28■□□□□ 0.52
SMARCD2-210ENST00000584400 DNAJC30Q96LL9 226 aa18.28■□□□□ 0.52
SMARCD2-210ENST00000584400 CHCHD7Q9BUK0 85 aa18.28■□□□□ 0.52
SMARCD2-210ENST00000584400 PKD1P98161 4303 aa18.28■□□□□ 0.52
SMARCD2-210ENST00000584400 TRAV8-3A0A0A6YYJ7 113 aa18.27■□□□□ 0.52
SMARCD2-210ENST00000584400 CT83Q5H943 113 aa18.27■□□□□ 0.52
SMARCD2-210ENST00000584400 TM2D2Q9BX73 214 aa18.27■□□□□ 0.52
SMARCD2-210ENST00000584400 Q9HAA7 133 aa18.27■□□□□ 0.52
SMARCD2-210ENST00000584400 PGPEP1Q9NXJ5 209 aa18.27■□□□□ 0.52
SMARCD2-210ENST00000584400 A0A087WTM6 91 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 A0A087WX48 190 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 TRBV6-8A0A0A6YYG3 113 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 ELOBQ15370 118 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 FAM74A3Q4VXF1 159 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 SMIM15Q7Z3B0 74 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 LINC01551Q86U37 167 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 NIT1Q86X76 327 aa18.26■□□□□ 0.51
SMARCD2-210ENST00000584400 M0QY20 66 aa18.25■□□□□ 0.51
SMARCD2-210ENST00000584400 SMDT1Q9H4I9 107 aa18.25■□□□□ 0.51
SMARCD2-210ENST00000584400 PKIAP61925 76 aa18.24■□□□□ 0.51
SMARCD2-210ENST00000584400 PEA15Q15121 130 aa18.24■□□□□ 0.51
SMARCD2-210ENST00000584400 SUMO4Q6EEV6 95 aa18.23■□□□□ 0.51
SMARCD2-210ENST00000584400 CDPF1Q6NVV7 123 aa18.23■□□□□ 0.51
SMARCD2-210ENST00000584400 GTSF1Q8WW33 167 aa18.23■□□□□ 0.51
SMARCD2-210ENST00000584400 BORCS7Q96B45 105 aa18.23■□□□□ 0.51
SMARCD2-210ENST00000584400 KRTAP10-2P60368 255 aa18.22■□□□□ 0.51
SMARCD2-210ENST00000584400 RASL11AQ6T310 242 aa18.22■□□□□ 0.51
SMARCD2-210ENST00000584400 TMEM262E9PQX1 116 aa18.21■□□□□ 0.51
SMARCD2-210ENST00000584400 Q8N3U1 123 aa18.21■□□□□ 0.51
SMARCD2-210ENST00000584400 C15orf54Q8N8G6 183 aa18.21■□□□□ 0.51
SMARCD2-210ENST00000584400 OSTCQ9NRP0 149 aa18.21■□□□□ 0.51
SMARCD2-210ENST00000584400 COX11Q9Y6N1 276 aa18.21■□□□□ 0.51
SMARCD2-210ENST00000584400 FOXA3P55318 350 aaPredicted RBP18.2■□□□□ 0.5
SMARCD2-210ENST00000584400 TMEM241Q24JQ0 296 aa18.2■□□□□ 0.5
SMARCD2-210ENST00000584400 RMI2Q96E14 147 aa18.2■□□□□ 0.5
SMARCD2-210ENST00000584400 FRZBQ92765 325 aa18.19■□□□□ 0.5
SMARCD2-210ENST00000584400 GFRA4Q9GZZ7 299 aa18.19■□□□□ 0.5
SMARCD2-210ENST00000584400 NIT2Q9NQR4 276 aa18.19■□□□□ 0.5
SMARCD2-210ENST00000584400 DNAH11Q96DT5 4516 aa18.19■□□□□ 0.5
SMARCD2-210ENST00000584400 FAM231BA6NCW3 169 aa18.18■□□□□ 0.5
SMARCD2-210ENST00000584400 TSKUQ8WUA8 353 aa18.18■□□□□ 0.5
SMARCD2-210ENST00000584400 PGLYRP4Q96LB8 373 aa18.18■□□□□ 0.5
SMARCD2-210ENST00000584400 CHCHD5Q9BSY4 110 aa18.18■□□□□ 0.5
SMARCD2-210ENST00000584400 PKHD1P08F94 4074 aa18.18■□□□□ 0.5
SMARCD2-210ENST00000584400 TRBV25-1A0A075B6N4 114 aa18.17■□□□□ 0.5
SMARCD2-210ENST00000584400 KLK12Q9UKR0 248 aa18.17■□□□□ 0.5
SMARCD2-210ENST00000584400 CDK2AP2O75956 126 aa18.16■□□□□ 0.5
SMARCD2-210ENST00000584400 NAT8Q9UHE5 227 aa18.16■□□□□ 0.5
SMARCD2-210ENST00000584400 Q0VG73 95 aa18.15■□□□□ 0.5
SMARCD2-210ENST00000584400 IGHV1-24A0A0C4DH33 117 aa18.13■□□□□ 0.49
SMARCD2-210ENST00000584400 LRCOL1A6NCL2 159 aa18.13■□□□□ 0.49
SMARCD2-210ENST00000584400 HIGD1CA8MV81 97 aa18.13■□□□□ 0.49
SMARCD2-210ENST00000584400 NTM-AS1Q6ZSK4 140 aa18.13■□□□□ 0.49
SMARCD2-210ENST00000584400 ISOC2Q96AB3 205 aa18.13■□□□□ 0.49
SMARCD2-210ENST00000584400 UBE2WQ96B02 151 aa18.13■□□□□ 0.49
SMARCD2-210ENST00000584400 DYNC1H1Q14204 4646 aaKnown RBP18.12■□□□□ 0.49
SMARCD2-210ENST00000584400 A0A1B0GUT8 65 aa18.12■□□□□ 0.49
SMARCD2-210ENST00000584400 RAB14P61106 215 aa18.12■□□□□ 0.49
SMARCD2-210ENST00000584400 RPL23P62829 140 aaKnown RBP18.12■□□□□ 0.49
SMARCD2-210ENST00000584400 IQCJQ1A5X6 159 aa18.12■□□□□ 0.49
SMARCD2-210ENST00000584400 C9JQL5 133 aa18.11■□□□□ 0.49
SMARCD2-210ENST00000584400 CRPP02741 224 aa18.11■□□□□ 0.49
SMARCD2-210ENST00000584400 ADIRFQ15847 76 aa18.11■□□□□ 0.49
SMARCD2-210ENST00000584400 NTN5Q8WTR8 489 aaPredicted RBP18.11■□□□□ 0.49
SMARCD2-210ENST00000584400 SRSF3P84103 164 aaKnown RBP18.1■□□□□ 0.49
SMARCD2-210ENST00000584400 IGKV2D-24A0A075B6R9 120 aa18.09■□□□□ 0.49
SMARCD2-210ENST00000584400 MPV17L2Q567V2 206 aa18.09■□□□□ 0.49
SMARCD2-210ENST00000584400 Q8N814 137 aa18.09■□□□□ 0.49
SMARCD2-210ENST00000584400 GATD1Q8NB37 220 aa18.09■□□□□ 0.49
SMARCD2-210ENST00000584400 V9GYV3 84 aa18.09■□□□□ 0.49
SMARCD2-210ENST00000584400 ANGP03950 147 aaKnown RBP18.08■□□□□ 0.48
SMARCD2-210ENST00000584400 ATRAIDQ6UW56 229 aa18.08■□□□□ 0.48
SMARCD2-210ENST00000584400 COTL1Q14019 142 aa18.07■□□□□ 0.48
SMARCD2-210ENST00000584400 KIAA1109Q2LD37 5005 aa18.06■□□□□ 0.48
SMARCD2-210ENST00000584400 TRAV26-2A0A0B4J265 109 aa18.06■□□□□ 0.48
SMARCD2-210ENST00000584400 GAGE6Q13070 117 aa18.06■□□□□ 0.48
SMARCD2-210ENST00000584400 RIGQ13278 110 aa18.06■□□□□ 0.48
SMARCD2-210ENST00000584400 TMEM243Q9BU79 118 aa18.06■□□□□ 0.48
SMARCD2-210ENST00000584400 TMEM191AQ9H0A3 160 aa18.06■□□□□ 0.48
SMARCD2-210ENST00000584400 NAT8BQ9UHF3 227 aa18.06■□□□□ 0.48
SMARCD2-210ENST00000584400 IGLV5-52A0A0A0MRZ9 124 aa18.05■□□□□ 0.48
SMARCD2-210ENST00000584400 C1orf43Q9BWL3 253 aa18.05■□□□□ 0.48
SMARCD2-210ENST00000584400 RBX1P62877 108 aa18.04■□□□□ 0.48
SMARCD2-210ENST00000584400 Q8N976 141 aa18.04■□□□□ 0.48
SMARCD2-210ENST00000584400 UBE2L6O14933 153 aa18.03■□□□□ 0.48
SMARCD2-210ENST00000584400 GCSHP23434 173 aa18.03■□□□□ 0.48
SMARCD2-210ENST00000584400 FUSP35637 526 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMARCD2-210ENST00000584400 MIAQ16674 131 aa18.03■□□□□ 0.48
SMARCD2-210ENST00000584400 NUP35Q8NFH5 326 aa18.03■□□□□ 0.48
SMARCD2-210ENST00000584400 AMTP48728 403 aa18.02■□□□□ 0.48
SMARCD2-210ENST00000584400 ENHOQ6UWT2 76 aa18.01■□□□□ 0.47
SMARCD2-210ENST00000584400 HERC2O95714 4834 aa18■□□□□ 0.47
SMARCD2-210ENST00000584400 NCR2O95944 276 aa18■□□□□ 0.47
SMARCD2-210ENST00000584400 RPL39LQ96EH5 51 aaKnown RBP18■□□□□ 0.47
SMARCD2-210ENST00000584400 A0A1B0GUV1 79 aa17.99■□□□□ 0.47
SMARCD2-210ENST00000584400 MAPKAPK5-AS1Q8N8E1 139 aa17.99■□□□□ 0.47
SMARCD2-210ENST00000584400 BAALCQ8WXS3 180 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms