RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 RYR1P21817 5038 aa13.65□□□□□ -0.22
SS18-224ENST00000584083 LRP1BQ9NZR2 4599 aa13.64□□□□□ -0.23
SS18-224ENST00000584083 LRCOL1A6NCL2 159 aa13.64□□□□□ -0.23
SS18-224ENST00000584083 K7EN84 100 aa13.64□□□□□ -0.23
SS18-224ENST00000584083 RNASE7Q9H1E1 156 aaKnown RBP13.64□□□□□ -0.23
SS18-224ENST00000584083 RPP21Q9H633 154 aaKnown RBP13.64□□□□□ -0.23
SS18-224ENST00000584083 TMEM262E9PQX1 116 aa13.63□□□□□ -0.23
SS18-224ENST00000584083 EIF5A2Q9GZV4 153 aaKnown RBP13.63□□□□□ -0.23
SS18-224ENST00000584083 KLK12Q9UKR0 248 aa13.63□□□□□ -0.23
SS18-224ENST00000584083 TRBV6-8A0A0A6YYG3 113 aa13.62□□□□□ -0.23
SS18-224ENST00000584083 TRGC1P0CF51 173 aa13.62□□□□□ -0.23
SS18-224ENST00000584083 MAPKAPK5-AS1Q8N8E1 139 aa13.62□□□□□ -0.23
SS18-224ENST00000584083 H7C1H1 209 aa13.61□□□□□ -0.23
SS18-224ENST00000584083 NTF3P20783 257 aa13.61□□□□□ -0.23
SS18-224ENST00000584083 ELOBQ15370 118 aa13.61□□□□□ -0.23
SS18-224ENST00000584083 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
SS18-224ENST00000584083 KRTAP17-1Q9BYP8 105 aa13.61□□□□□ -0.23
SS18-224ENST00000584083 CTRLP40313 264 aa13.6□□□□□ -0.23
SS18-224ENST00000584083 SUMO4Q6EEV6 95 aa13.6□□□□□ -0.23
SS18-224ENST00000584083 WDR73Q6P4I2 378 aa13.6□□□□□ -0.23
SS18-224ENST00000584083 RMI2Q96E14 147 aa13.6□□□□□ -0.23
SS18-224ENST00000584083 HSPG2P98160 4391 aa13.59□□□□□ -0.23
SS18-224ENST00000584083 M0QY20 66 aa13.59□□□□□ -0.23
SS18-224ENST00000584083 TWIST1Q15672 202 aa13.59□□□□□ -0.23
SS18-224ENST00000584083 TMEM97Q5BJF2 176 aa13.59□□□□□ -0.23
SS18-224ENST00000584083 Q8N814 137 aa13.59□□□□□ -0.23
SS18-224ENST00000584083 CHCHD5Q9BSY4 110 aa13.59□□□□□ -0.23
SS18-224ENST00000584083 DPH3P1Q9H4G8 78 aa13.59□□□□□ -0.23
SS18-224ENST00000584083 IGLV5-52A0A0A0MRZ9 124 aa13.58□□□□□ -0.24
SS18-224ENST00000584083 GATCO43716 136 aaKnown RBP13.58□□□□□ -0.24
SS18-224ENST00000584083 GCSHP23434 173 aa13.58□□□□□ -0.24
SS18-224ENST00000584083 UBE2WQ96B02 151 aa13.58□□□□□ -0.24
SS18-224ENST00000584083 DNAJC30Q96LL9 226 aa13.58□□□□□ -0.24
SS18-224ENST00000584083 COX11Q9Y6N1 276 aa13.58□□□□□ -0.24
SS18-224ENST00000584083 PCLOQ9Y6V0 5065 aa13.58□□□□□ -0.24
SS18-224ENST00000584083 IGKV2D-24A0A075B6R9 120 aa13.57□□□□□ -0.24
SS18-224ENST00000584083 KRTAP10-1P60331 282 aa13.57□□□□□ -0.24
SS18-224ENST00000584083 NTN5Q8WTR8 489 aaPredicted RBP13.57□□□□□ -0.24
SS18-224ENST00000584083 FAM210AQ96ND0 272 aa13.57□□□□□ -0.24
SS18-224ENST00000584083 SMIM7Q9BQ49 75 aa13.57□□□□□ -0.24
SS18-224ENST00000584083 DNAH5Q8TE73 4624 aa13.57□□□□□ -0.24
SS18-224ENST00000584083 LECT2O14960 151 aa13.56□□□□□ -0.24
SS18-224ENST00000584083 PKIAP61925 76 aa13.56□□□□□ -0.24
SS18-224ENST00000584083 RASL11AQ6T310 242 aa13.56□□□□□ -0.24
SS18-224ENST00000584083 NTM-AS1Q6ZSK4 140 aa13.56□□□□□ -0.24
SS18-224ENST00000584083 KRTAP4-5Q9BYR2 181 aa13.56□□□□□ -0.24
SS18-224ENST00000584083 MPV17L2Q567V2 206 aa13.55□□□□□ -0.24
SS18-224ENST00000584083 C15orf54Q8N8G6 183 aa13.55□□□□□ -0.24
SS18-224ENST00000584083 GTSF1Q8WW33 167 aa13.55□□□□□ -0.24
SS18-224ENST00000584083 CNFNQ9BYD5 112 aa13.55□□□□□ -0.24
SS18-224ENST00000584083 TRBV25-1A0A075B6N4 114 aa13.54□□□□□ -0.24
SS18-224ENST00000584083 ZNF727A8MUV8 499 aa13.54□□□□□ -0.24
SS18-224ENST00000584083 A8MWL6 223 aa13.54□□□□□ -0.24
SS18-224ENST00000584083 NDUFS6O75380 124 aaKnown RBP13.54□□□□□ -0.24
SS18-224ENST00000584083 WFDC2Q14508 124 aa13.54□□□□□ -0.24
SS18-224ENST00000584083 FAM231DQ6ZW35 169 aa13.54□□□□□ -0.24
SS18-224ENST00000584083 BAALCQ8WXS3 180 aa13.54□□□□□ -0.24
SS18-224ENST00000584083 APOBP04114 4563 aaKnown RBP13.54□□□□□ -0.24
SS18-224ENST00000584083 ANGP03950 147 aaKnown RBP13.53□□□□□ -0.24
SS18-224ENST00000584083 SRP19P09132 144 aaKnown RBP13.53□□□□□ -0.24
SS18-224ENST00000584083 Q0VG73 95 aa13.53□□□□□ -0.24
SS18-224ENST00000584083 GAGE6Q13070 117 aa13.53□□□□□ -0.24
SS18-224ENST00000584083 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
SS18-224ENST00000584083 Q8N1X5 172 aa13.53□□□□□ -0.24
SS18-224ENST00000584083 NIT2Q9NQR4 276 aa13.53□□□□□ -0.24
SS18-224ENST00000584083 IGHV1-24A0A0C4DH33 117 aa13.52□□□□□ -0.25
SS18-224ENST00000584083 CRPP02741 224 aa13.52□□□□□ -0.25
SS18-224ENST00000584083 ATRAIDQ6UW56 229 aa13.52□□□□□ -0.25
SS18-224ENST00000584083 PGLYRP4Q96LB8 373 aa13.52□□□□□ -0.25
SS18-224ENST00000584083 IQCJQ1A5X6 159 aa13.51□□□□□ -0.25
SS18-224ENST00000584083 LINC01551Q86U37 167 aa13.51□□□□□ -0.25
SS18-224ENST00000584083 Q8N976 141 aa13.51□□□□□ -0.25
SS18-224ENST00000584083 XGP55808 180 aa13.5□□□□□ -0.25
SS18-224ENST00000584083 ENHOQ6UWT2 76 aa13.5□□□□□ -0.25
SS18-224ENST00000584083 BORCS7Q96B45 105 aa13.5□□□□□ -0.25
SS18-224ENST00000584083 C1orf43Q9BWL3 253 aa13.5□□□□□ -0.25
SS18-224ENST00000584083 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.49□□□□□ -0.25
SS18-224ENST00000584083 RBX1P62877 108 aa13.49□□□□□ -0.25
SS18-224ENST00000584083 CT83Q5H943 113 aa13.49□□□□□ -0.25
SS18-224ENST00000584083 TRAV26-2A0A0B4J265 109 aa13.48□□□□□ -0.25
SS18-224ENST00000584083 FOXA3P55318 350 aaPredicted RBP13.48□□□□□ -0.25
SS18-224ENST00000584083 TEX261Q6UWH6 196 aa13.48□□□□□ -0.25
SS18-224ENST00000584083 GATD1Q8NB37 220 aa13.48□□□□□ -0.25
SS18-224ENST00000584083 DEFB104AQ8WTQ1 72 aa13.48□□□□□ -0.25
SS18-224ENST00000584083 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
SS18-224ENST00000584083 FRZBQ92765 325 aa13.47□□□□□ -0.25
SS18-224ENST00000584083 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
SS18-224ENST00000584083 TMEM241Q24JQ0 296 aa13.46□□□□□ -0.25
SS18-224ENST00000584083 CLPSL2Q6UWE3 100 aa13.46□□□□□ -0.25
SS18-224ENST00000584083 TSKUQ8WUA8 353 aa13.46□□□□□ -0.25
SS18-224ENST00000584083 COTL1Q14019 142 aa13.45□□□□□ -0.26
SS18-224ENST00000584083 MIAQ16674 131 aa13.45□□□□□ -0.26
SS18-224ENST00000584083 FAM74A3Q4VXF1 159 aa13.45□□□□□ -0.26
SS18-224ENST00000584083 LINC00269Q8N2A0 174 aa13.45□□□□□ -0.26
SS18-224ENST00000584083 TMEM70Q9BUB7 260 aa13.45□□□□□ -0.26
SS18-224ENST00000584083 HIGD1CA8MV81 97 aa13.44□□□□□ -0.26
SS18-224ENST00000584083 AMTP48728 403 aa13.44□□□□□ -0.26
SS18-224ENST00000584083 PEA15Q15121 130 aa13.44□□□□□ -0.26
SS18-224ENST00000584083 RPL39LQ96EH5 51 aaKnown RBP13.44□□□□□ -0.26
SS18-224ENST00000584083 GFRA4Q9GZZ7 299 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms