RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 DMRTA1Q5VZB9 504 aa9.03□□□□□ -0.96
SS18-222ENST00000582792 ZFP2Q6ZN57 461 aa9.03□□□□□ -0.96
SS18-222ENST00000582792 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
SS18-222ENST00000582792 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
SS18-222ENST00000582792 Q9HAA7 133 aa9.03□□□□□ -0.96
SS18-222ENST00000582792 GATA1P15976 413 aaPredicted RBP9.02□□□□□ -0.97
SS18-222ENST00000582792 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
SS18-222ENST00000582792 CACNG7P62955 275 aa9.02□□□□□ -0.97
SS18-222ENST00000582792 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
SS18-222ENST00000582792 Q6ZSA8 131 aa9.02□□□□□ -0.97
SS18-222ENST00000582792 C15orf54Q8N8G6 183 aa9.02□□□□□ -0.97
SS18-222ENST00000582792 GFRA4Q9GZZ7 299 aa9.02□□□□□ -0.97
SS18-222ENST00000582792 TRAV8-6A0A0B4J262 113 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 TMEM218A2RU14 115 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 RHODO00212 210 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 CTRLP40313 264 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 ADIRFQ15847 76 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 CNFNQ9BYD5 112 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 LRP1Q07954 4544 aaKnown RBP9.01□□□□□ -0.97
SS18-222ENST00000582792 UBR4Q5T4S7 5183 aa9.01□□□□□ -0.97
SS18-222ENST00000582792 GZMBP10144 247 aa9□□□□□ -0.97
SS18-222ENST00000582792 OR10J3Q5JRS4 329 aa9□□□□□ -0.97
SS18-222ENST00000582792 SPANXN1Q5VSR9 72 aa9□□□□□ -0.97
SS18-222ENST00000582792 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
SS18-222ENST00000582792 OR10G8Q8NGN5 311 aa9□□□□□ -0.97
SS18-222ENST00000582792 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
SS18-222ENST00000582792 TSKUQ8WUA8 353 aa9□□□□□ -0.97
SS18-222ENST00000582792 V9GYV3 84 aa9□□□□□ -0.97
SS18-222ENST00000582792 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 M0R381 172 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 IGHV3-30P01768 117 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 IGHV3-30-3P0DP02 117 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 IGHV3-30-5P0DP03 117 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 WFDC2Q14508 124 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 LAGE3Q14657 143 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 LYZL1Q6UWQ5 148 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 SLC25A29Q8N8R3 303 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 TM2D2Q9BX73 214 aa8.99□□□□□ -0.97
SS18-222ENST00000582792 PPP1R2P9O14990 202 aa8.98□□□□□ -0.97
SS18-222ENST00000582792 LELP1Q5T871 98 aa8.98□□□□□ -0.97
SS18-222ENST00000582792 GTSF1Q8WW33 167 aa8.98□□□□□ -0.97
SS18-222ENST00000582792 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
SS18-222ENST00000582792 SEC11CQ9BY50 192 aa8.98□□□□□ -0.97
SS18-222ENST00000582792 RHOHQ15669 191 aa8.97□□□□□ -0.97
SS18-222ENST00000582792 AP1S3Q96PC3 154 aa8.97□□□□□ -0.97
SS18-222ENST00000582792 TPPP3Q9BW30 176 aa8.97□□□□□ -0.97
SS18-222ENST00000582792 JPT2Q9H910 190 aa8.97□□□□□ -0.97
SS18-222ENST00000582792 F8W036 122 aa8.96□□□□□ -0.98
SS18-222ENST00000582792 TRGC1P0CF51 173 aa8.96□□□□□ -0.98
SS18-222ENST00000582792 C10orf91Q5T1B1 145 aa8.96□□□□□ -0.98
SS18-222ENST00000582792 SAMD10Q9BYL1 202 aa8.96□□□□□ -0.98
SS18-222ENST00000582792 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.98
SS18-222ENST00000582792 FAT3Q8TDW7 4589 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 HIGD1CA8MV81 97 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 ADCYAP1P18509 176 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 NTF3P20783 257 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 RAB4BP61018 213 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 ANAPC16Q96DE5 110 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 GTSF1LQ9H1H1 148 aa8.95□□□□□ -0.98
SS18-222ENST00000582792 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.94□□□□□ -0.98
SS18-222ENST00000582792 MUC21A0A0G2JKD1 596 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 MUC21A0A140T8X8 626 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 LECT2O14960 151 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 MT-ND4LP03901 98 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 SMIM17P0DL12 118 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 Q8N3U1 123 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 ATP6V0E2Q8NHE4 81 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 BORCS7Q96B45 105 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 PGLYRP4Q96LB8 373 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 NAT8BQ9UHF3 227 aa8.94□□□□□ -0.98
SS18-222ENST00000582792 CARHSP1Q9Y2V2 147 aaKnown RBP8.94□□□□□ -0.98
SS18-222ENST00000582792 A0A087WWL8 130 aa8.93□□□□□ -0.98
SS18-222ENST00000582792 TRAV8-3A0A0A6YYJ7 113 aa8.93□□□□□ -0.98
SS18-222ENST00000582792 IGHV3-73A0A0B4J1V6 119 aa8.93□□□□□ -0.98
SS18-222ENST00000582792 A0A1B0GUT8 65 aa8.93□□□□□ -0.98
SS18-222ENST00000582792 KRTAP10-4P60372 401 aaPredicted RBP8.93□□□□□ -0.98
SS18-222ENST00000582792 TWIST1Q15672 202 aa8.93□□□□□ -0.98
SS18-222ENST00000582792 FAM74A4Q5TZK3 123 aa8.93□□□□□ -0.98
SS18-222ENST00000582792 DPH3P1Q9H4G8 78 aa8.93□□□□□ -0.98
SS18-222ENST00000582792 OXTP01178 125 aa8.92□□□□□ -0.98
SS18-222ENST00000582792 RIGQ13278 110 aa8.92□□□□□ -0.98
SS18-222ENST00000582792 SMIM15Q7Z3B0 74 aa8.92□□□□□ -0.98
SS18-222ENST00000582792 C14orf178Q8N769 122 aaPredicted RBP8.92□□□□□ -0.98
SS18-222ENST00000582792 NUP35Q8NFH5 326 aa8.92□□□□□ -0.98
SS18-222ENST00000582792 CTDSP1Q9GZU7 261 aa8.92□□□□□ -0.98
SS18-222ENST00000582792 A0A1B0GW15 77 aa8.91□□□□□ -0.98
SS18-222ENST00000582792 LINC00694P0DN24 101 aa8.91□□□□□ -0.98
SS18-222ENST00000582792 LINC01620Q4KN68 170 aa8.91□□□□□ -0.98
SS18-222ENST00000582792 COX11Q9Y6N1 276 aa8.91□□□□□ -0.98
SS18-222ENST00000582792 H7C1H1 209 aa8.9□□□□□ -0.98
SS18-222ENST00000582792 SSTP61278 116 aa8.9□□□□□ -0.98
SS18-222ENST00000582792 ZNF56Q15929 161 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms