RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 IGKCP01834 107 aa16.54■□□□□ 0.24
CCDC47-204ENST00000582252 PF4P02776 101 aa16.54■□□□□ 0.24
CCDC47-204ENST00000582252 C2orf66Q6UXQ4 117 aa16.54■□□□□ 0.24
CCDC47-204ENST00000582252 TMEM208Q9BTX3 173 aa16.54■□□□□ 0.24
CCDC47-204ENST00000582252 EDA2RQ9HAV5 297 aa16.54■□□□□ 0.24
CCDC47-204ENST00000582252 TRAV12-1A0A0B4J245 112 aa16.53■□□□□ 0.24
CCDC47-204ENST00000582252 TRBV27A0A0K0K1C4 114 aa16.53■□□□□ 0.24
CCDC47-204ENST00000582252 BATFQ16520 125 aa16.53■□□□□ 0.24
CCDC47-204ENST00000582252 LURAP1LQ8IV03 231 aa16.53■□□□□ 0.24
CCDC47-204ENST00000582252 CYSLTR1Q9Y271 337 aa16.53■□□□□ 0.24
CCDC47-204ENST00000582252 A0A087WX48 190 aa16.52■□□□□ 0.24
CCDC47-204ENST00000582252 A0A1B0GV90 55 aa16.52■□□□□ 0.24
CCDC47-204ENST00000582252 XCL2Q9UBD3 114 aa16.52■□□□□ 0.24
CCDC47-204ENST00000582252 BEAN1Q3B7T3 259 aa16.51■□□□□ 0.23
CCDC47-204ENST00000582252 ERASQ7Z444 233 aa16.51■□□□□ 0.23
CCDC47-204ENST00000582252 RHODO00212 210 aa16.5■□□□□ 0.23
CCDC47-204ENST00000582252 ANKRD39Q53RE8 183 aa16.5■□□□□ 0.23
CCDC47-204ENST00000582252 COL5A1-AS1Q5SY13 56 aa16.5■□□□□ 0.23
CCDC47-204ENST00000582252 ZFP2Q6ZN57 461 aa16.5■□□□□ 0.23
CCDC47-204ENST00000582252 PLNP26678 52 aa16.5■□□□□ 0.23
CCDC47-204ENST00000582252 C11orf72Q8NBR9 251 aa16.5■□□□□ 0.23
CCDC47-204ENST00000582252 RHOHQ15669 191 aa16.49■□□□□ 0.23
CCDC47-204ENST00000582252 STPG4Q8N801 248 aa16.49■□□□□ 0.23
CCDC47-204ENST00000582252 VWFP04275 2813 aa16.49■□□□□ 0.23
CCDC47-204ENST00000582252 RIPPLY3P57055 190 aa16.48■□□□□ 0.23
CCDC47-204ENST00000582252 NEGR1Q7Z3B1 354 aa16.48■□□□□ 0.23
CCDC47-204ENST00000582252 LINC00482Q8N8I6 264 aa16.48■□□□□ 0.23
CCDC47-204ENST00000582252 MORN3Q6PF18 240 aaPredicted RBP16.48■□□□□ 0.23
CCDC47-204ENST00000582252 C12orf54Q6X4T0 127 aa16.48■□□□□ 0.23
CCDC47-204ENST00000582252 C3orf56Q8N813 242 aa16.48■□□□□ 0.23
CCDC47-204ENST00000582252 NOTCH3Q9UM47 2321 aa16.47■□□□□ 0.23
CCDC47-204ENST00000582252 F8VRH5 84 aa16.47■□□□□ 0.23
CCDC47-204ENST00000582252 MRPL35Q9NZE8 188 aaKnown RBP16.47■□□□□ 0.23
CCDC47-204ENST00000582252 DLEU1O43261 78 aa16.46■□□□□ 0.23
CCDC47-204ENST00000582252 C1orf158Q8N1D5 194 aa16.46■□□□□ 0.23
CCDC47-204ENST00000582252 NEXN-AS1Q8NBZ9 246 aa16.46■□□□□ 0.23
CCDC47-204ENST00000582252 TMEM141Q96I45 108 aa16.46■□□□□ 0.23
CCDC47-204ENST00000582252 C1QTNF4Q9BXJ3 329 aa16.46■□□□□ 0.23
CCDC47-204ENST00000582252 TP53TG1Q9Y2A0 90 aa16.46■□□□□ 0.23
CCDC47-204ENST00000582252 I3L3M4 83 aa16.45■□□□□ 0.22
CCDC47-204ENST00000582252 HINT1P49773 126 aaPredicted RBP16.45■□□□□ 0.22
CCDC47-204ENST00000582252 CHTOPQ9Y3Y2 248 aaKnown RBP16.45■□□□□ 0.22
CCDC47-204ENST00000582252 UFSP1Q6NVU6 142 aa16.45■□□□□ 0.22
CCDC47-204ENST00000582252 SHISA2Q6UWI4 295 aa16.45■□□□□ 0.22
CCDC47-204ENST00000582252 BOD1L2Q8IYS8 172 aa16.45■□□□□ 0.22
CCDC47-204ENST00000582252 BAALCQ8WXS3 180 aa16.45■□□□□ 0.22
CCDC47-204ENST00000582252 HHLA3Q9XRX5 114 aa16.45■□□□□ 0.22
CCDC47-204ENST00000582252 NMUP48645 174 aa16.44■□□□□ 0.22
CCDC47-204ENST00000582252 CFAP126Q5VTH2 177 aa16.44■□□□□ 0.22
CCDC47-204ENST00000582252 TIMM17AQ99595 171 aa16.44■□□□□ 0.22
CCDC47-204ENST00000582252 IGHV3OR16-12A0A075B7B8 117 aa16.43■□□□□ 0.22
CCDC47-204ENST00000582252 SIVA1O15304 175 aa16.43■□□□□ 0.22
CCDC47-204ENST00000582252 PRM2P04554 102 aa16.43■□□□□ 0.22
CCDC47-204ENST00000582252 ZC2HC1BQ5TFG8 222 aa16.43■□□□□ 0.22
CCDC47-204ENST00000582252 TRRAPQ9Y4A5 3859 aa16.43■□□□□ 0.22
CCDC47-204ENST00000582252 RS1O15537 224 aa16.42■□□□□ 0.22
CCDC47-204ENST00000582252 FGF6P10767 208 aa16.42■□□□□ 0.22
CCDC47-204ENST00000582252 TMEM263Q8WUH6 116 aaKnown RBP16.42■□□□□ 0.22
CCDC47-204ENST00000582252 C19orf73Q9NVV2 129 aa16.42■□□□□ 0.22
CCDC47-204ENST00000582252 MRPL16Q9NX20 251 aaKnown RBP16.42■□□□□ 0.22
CCDC47-204ENST00000582252 TNFRSF18Q9Y5U5 241 aa16.42■□□□□ 0.22
CCDC47-204ENST00000582252 INSL3P51460 131 aa16.42■□□□□ 0.22
CCDC47-204ENST00000582252 IGHV3-73A0A0B4J1V6 119 aa16.41■□□□□ 0.22
CCDC47-204ENST00000582252 IL17DQ8TAD2 202 aa16.41■□□□□ 0.22
CCDC47-204ENST00000582252 DNAJC30Q96LL9 226 aa16.41■□□□□ 0.22
CCDC47-204ENST00000582252 TP73-AS1Q9UF72 201 aa16.41■□□□□ 0.22
CCDC47-204ENST00000582252 IGIPA6NJ69 53 aa16.39■□□□□ 0.21
CCDC47-204ENST00000582252 TSHBP01222 138 aa16.39■□□□□ 0.21
CCDC47-204ENST00000582252 AZU1P20160 251 aa16.39■□□□□ 0.21
CCDC47-204ENST00000582252 TMEM97Q5BJF2 176 aa16.39■□□□□ 0.21
CCDC47-204ENST00000582252 PAPPA-AS1Q5QFB9 102 aa16.39■□□□□ 0.21
CCDC47-204ENST00000582252 RNASE8Q8TDE3 154 aaKnown RBP16.39■□□□□ 0.21
CCDC47-204ENST00000582252 C2orf91Q6ZV80 131 aa16.39■□□□□ 0.21
CCDC47-204ENST00000582252 PRSS29PA6NIE9 313 aa16.38■□□□□ 0.21
CCDC47-204ENST00000582252 IGHV3-53P01767 116 aa16.38■□□□□ 0.21
CCDC47-204ENST00000582252 PMVKQ15126 192 aa16.38■□□□□ 0.21
CCDC47-204ENST00000582252 MPV17L2Q567V2 206 aa16.38■□□□□ 0.21
CCDC47-204ENST00000582252 GTSCR1Q86UQ5 136 aa16.38■□□□□ 0.21
CCDC47-204ENST00000582252 RPL35AP18077 110 aaKnown RBP16.37■□□□□ 0.21
CCDC47-204ENST00000582252 TCTAP57738 103 aa16.37■□□□□ 0.21
CCDC47-204ENST00000582252 C9orf66Q5T8R8 295 aa16.37■□□□□ 0.21
CCDC47-204ENST00000582252 C16orf74Q96GX8 76 aa16.37■□□□□ 0.21
CCDC47-204ENST00000582252 RPL39P62891 51 aaKnown RBP16.36■□□□□ 0.21
CCDC47-204ENST00000582252 WFDC10AQ9H1F0 79 aa16.36■□□□□ 0.21
CCDC47-204ENST00000582252 TRGV1A0A0A0MS02 117 aa16.36■□□□□ 0.21
CCDC47-204ENST00000582252 C20orf203Q8NBC4 194 aa16.36■□□□□ 0.21
CCDC47-204ENST00000582252 OR4C5Q8NGB2 326 aa16.36■□□□□ 0.21
CCDC47-204ENST00000582252 NACAE9PAV3 2078 aa16.35■□□□□ 0.21
CCDC47-204ENST00000582252 ANK2Q01484 3957 aa16.35■□□□□ 0.21
CCDC47-204ENST00000582252 BVES-AS1Q5T3Y7 98 aa16.35■□□□□ 0.21
CCDC47-204ENST00000582252 PCP2Q8IVA1 136 aa16.35■□□□□ 0.21
CCDC47-204ENST00000582252 GIG44P09565 113 aaPredicted RBP16.34■□□□□ 0.21
CCDC47-204ENST00000582252 WFDC9Q8NEX5 89 aa16.34■□□□□ 0.21
CCDC47-204ENST00000582252 DAZ2Q13117 558 aaKnown RBP16.33■□□□□ 0.21
CCDC47-204ENST00000582252 IGKV2D-26A0A0A0MRZ7 120 aa16.33■□□□□ 0.2
CCDC47-204ENST00000582252 P0DMU3 169 aa16.33■□□□□ 0.2
CCDC47-204ENST00000582252 FAM231AP0DMU4 169 aa16.33■□□□□ 0.2
CCDC47-204ENST00000582252 FAM231CP0DMU5 169 aa16.33■□□□□ 0.2
CCDC47-204ENST00000582252 HSD52Q0P140 79 aa16.33■□□□□ 0.2
CCDC47-204ENST00000582252 DEFB104AQ8WTQ1 72 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms