RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 NUPR1O60356 82 aa16.56■□□□□ 0.24
RARA-AS1-201ENST00000581080 LINC00614P0C842 121 aa16.56■□□□□ 0.24
RARA-AS1-201ENST00000581080 HOXA5P20719 270 aa16.56■□□□□ 0.24
RARA-AS1-201ENST00000581080 B9D2Q9BPU9 175 aa16.56■□□□□ 0.24
RARA-AS1-201ENST00000581080 ZMAT4Q9H898 229 aa16.56■□□□□ 0.24
RARA-AS1-201ENST00000581080 TRBV6-5A0A0K0K1A5 114 aa16.55■□□□□ 0.24
RARA-AS1-201ENST00000581080 FHL2Q14192 279 aa16.55■□□□□ 0.24
RARA-AS1-201ENST00000581080 TRGV4A0A0C4DH28 118 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 P0DMU3 169 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 FAM231AP0DMU4 169 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 FAM231CP0DMU5 169 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 ST20Q9HBF5 79 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 A0A0J9YWU9 116 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 ESDP10768 282 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 SLC25A29Q8N8R3 303 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 Q9UF83 564 aa16.54■□□□□ 0.24
RARA-AS1-201ENST00000581080 TENM3Q9P273 2699 aa16.53■□□□□ 0.24
RARA-AS1-201ENST00000581080 RNASEKQ6P5S7 137 aaKnown RBP16.53■□□□□ 0.24
RARA-AS1-201ENST00000581080 CHCHD1Q96BP2 118 aaKnown RBP16.53■□□□□ 0.24
RARA-AS1-201ENST00000581080 NXT2Q9NPJ8 142 aaKnown RBP16.53■□□□□ 0.24
RARA-AS1-201ENST00000581080 IGLV2-18A0A075B6J9 118 aa16.52■□□□□ 0.24
RARA-AS1-201ENST00000581080 TRBV6-4A0A1B0GX49 114 aa16.52■□□□□ 0.24
RARA-AS1-201ENST00000581080 DEFA6Q01524 100 aa16.52■□□□□ 0.24
RARA-AS1-201ENST00000581080 SMIM2Q9BVW6 85 aa16.52■□□□□ 0.24
RARA-AS1-201ENST00000581080 K7EQD1 137 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 PMCHP20382 165 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 POLR2KP53803 58 aaKnown RBP16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 FA2HQ7L5A8 372 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 Q8N8P6 123 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 TMEM70Q9BUB7 260 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 TRBV10-1A0A0K0K1A3 114 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 SDHAF1A6NFY7 115 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 RPL32P62910 135 aaKnown RBP16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 PDZD11Q5EBL8 140 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 HIST3H2BBQ8N257 126 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 NEXN-AS1Q8NBZ9 246 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 AP5S1Q9NUS5 200 aa16.51■□□□□ 0.23
RARA-AS1-201ENST00000581080 ATP5G1P05496 136 aa16.5■□□□□ 0.23
RARA-AS1-201ENST00000581080 C12orf74Q32Q52 190 aa16.5■□□□□ 0.23
RARA-AS1-201ENST00000581080 DNAJC30Q96LL9 226 aa16.5■□□□□ 0.23
RARA-AS1-201ENST00000581080 TNFRSF18Q9Y5U5 241 aa16.5■□□□□ 0.23
RARA-AS1-201ENST00000581080 HHLA3Q9XRX5 114 aa16.49■□□□□ 0.23
RARA-AS1-201ENST00000581080 HSBP1O75506 76 aa16.49■□□□□ 0.23
RARA-AS1-201ENST00000581080 TRBV27A0A0K0K1C4 114 aa16.48■□□□□ 0.23
RARA-AS1-201ENST00000581080 LINC01546A6NGU7 62 aa16.48■□□□□ 0.23
RARA-AS1-201ENST00000581080 VCYO14598 125 aa16.48■□□□□ 0.23
RARA-AS1-201ENST00000581080 RHOHQ15669 191 aa16.47■□□□□ 0.23
RARA-AS1-201ENST00000581080 TRBV7-3A0A075B6L6 115 aa16.46■□□□□ 0.23
RARA-AS1-201ENST00000581080 PRO0255Q9UI72 69 aa16.46■□□□□ 0.23
RARA-AS1-201ENST00000581080 S100A2P29034 98 aa16.46■□□□□ 0.22
RARA-AS1-201ENST00000581080 CRYBA4P53673 196 aa16.46■□□□□ 0.22
RARA-AS1-201ENST00000581080 NEGR1Q7Z3B1 354 aa16.46■□□□□ 0.22
RARA-AS1-201ENST00000581080 PRADC1Q9BSG0 188 aa16.46■□□□□ 0.22
RARA-AS1-201ENST00000581080 IFITM10A6NMD0 228 aa16.45■□□□□ 0.22
RARA-AS1-201ENST00000581080 RPL36AP83881 106 aaKnown RBP16.45■□□□□ 0.22
RARA-AS1-201ENST00000581080 FAM19A2Q8N3H0 131 aa16.45■□□□□ 0.22
RARA-AS1-201ENST00000581080 ZNRF2Q8NHG8 242 aa16.45■□□□□ 0.22
RARA-AS1-201ENST00000581080 C11orf45Q8TAV5 145 aa16.45■□□□□ 0.22
RARA-AS1-201ENST00000581080 RPL36ALQ969Q0 106 aaKnown RBP16.45■□□□□ 0.22
RARA-AS1-201ENST00000581080 K7EMI3 77 aa16.44■□□□□ 0.22
RARA-AS1-201ENST00000581080 TCAPO15273 167 aa16.44■□□□□ 0.22
RARA-AS1-201ENST00000581080 AMTP48728 403 aa16.43■□□□□ 0.22
RARA-AS1-201ENST00000581080 PMCHL1Q16048 86 aa16.43■□□□□ 0.22
RARA-AS1-201ENST00000581080 KIR2DL4Q99706 377 aa16.43■□□□□ 0.22
RARA-AS1-201ENST00000581080 I3L3M4 83 aa16.43■□□□□ 0.22
RARA-AS1-201ENST00000581080 HIST1H2BLQ99880 126 aa16.43■□□□□ 0.22
RARA-AS1-201ENST00000581080 IGHV1-24A0A0C4DH33 117 aa16.42■□□□□ 0.22
RARA-AS1-201ENST00000581080 F5H768 121 aa16.42■□□□□ 0.22
RARA-AS1-201ENST00000581080 NHLRC4P0CG21 123 aaPredicted RBP16.42■□□□□ 0.22
RARA-AS1-201ENST00000581080 LAGE3Q14657 143 aa16.42■□□□□ 0.22
RARA-AS1-201ENST00000581080 TMEM18Q96B42 140 aa16.42■□□□□ 0.22
RARA-AS1-201ENST00000581080 LOC100131303A0A0U1RQF7 123 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 LOC105371267A0A1B0GV96 52 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 GAGE12JA6NER3 117 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 HTN3P15516 51 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 GAGE1Q13065 139 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 GAGE4Q13068 117 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 GAGE5Q13069 117 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 GAGE13Q4V321 117 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 Q6ZTC4 211 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 FABP4P15090 132 aa16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 NANOS2P60321 138 aaKnown RBP16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 PACRGQ96M98 296 aaPredicted RBP16.41■□□□□ 0.22
RARA-AS1-201ENST00000581080 PAX4O43316 350 aa16.4■□□□□ 0.22
RARA-AS1-201ENST00000581080 UBE2D3P61077 147 aa16.4■□□□□ 0.22
RARA-AS1-201ENST00000581080 UBE2D2P62837 147 aa16.4■□□□□ 0.22
RARA-AS1-201ENST00000581080 DEFB104AQ8WTQ1 72 aa16.4■□□□□ 0.22
RARA-AS1-201ENST00000581080 ORMDL2Q53FV1 153 aa16.39■□□□□ 0.21
RARA-AS1-201ENST00000581080 VSIG2Q96IQ7 327 aa16.39■□□□□ 0.21
RARA-AS1-201ENST00000581080 A0A096LNJ9 63 aa16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 DAZ4Q86SG3 579 aaKnown RBP16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 DAZ3Q9NR90 486 aaKnown RBP16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 MEGF8Q7Z7M0 2845 aa16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 HUWE1Q7Z6Z7 4374 aaKnown RBP16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 TRAV26-1A0A087WT03 109 aa16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 TSHBP01222 138 aa16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 GYPEP15421 78 aa16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 PHLDA1Q8WV24 401 aaPredicted RBP16.38■□□□□ 0.21
RARA-AS1-201ENST00000581080 IGHV3-38A0A0C4DH36 116 aa16.37■□□□□ 0.21
RARA-AS1-201ENST00000581080 FCER1GP30273 86 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms