RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 ERVFC1-1P60608 527 aa13.51□□□□□ -0.25
SS18-218ENST00000581021 C10orf126Q8N4M7 172 aa13.51□□□□□ -0.25
SS18-218ENST00000581021 WDR73Q6P4I2 378 aa13.5□□□□□ -0.25
SS18-218ENST00000581021 CT83Q5H943 113 aa13.49□□□□□ -0.25
SS18-218ENST00000581021 SPATA12Q7Z6I5 190 aa13.49□□□□□ -0.25
SS18-218ENST00000581021 DAZ4Q86SG3 579 aaKnown RBP13.49□□□□□ -0.25
SS18-218ENST00000581021 NFE4Q86UQ8 179 aa13.49□□□□□ -0.25
SS18-218ENST00000581021 NIT1Q86X76 327 aa13.49□□□□□ -0.25
SS18-218ENST00000581021 DAZ3Q9NR90 486 aaKnown RBP13.49□□□□□ -0.25
SS18-218ENST00000581021 TRGC1P0CF51 173 aa13.48□□□□□ -0.25
SS18-218ENST00000581021 FOXA3P55318 350 aaPredicted RBP13.48□□□□□ -0.25
SS18-218ENST00000581021 TWIST1Q15672 202 aa13.48□□□□□ -0.25
SS18-218ENST00000581021 Q9HAA7 133 aa13.48□□□□□ -0.25
SS18-218ENST00000581021 FUSP35637 526 aaKnown RBP eCLIP13.47□□□□□ -0.25
SS18-218ENST00000581021 RPL23P62829 140 aaKnown RBP13.47□□□□□ -0.25
SS18-218ENST00000581021 NTM-AS1Q6ZSK4 140 aa13.47□□□□□ -0.25
SS18-218ENST00000581021 ISOC2Q96AB3 205 aa13.47□□□□□ -0.25
SS18-218ENST00000581021 PGLYRP4Q96LB8 373 aa13.47□□□□□ -0.25
SS18-218ENST00000581021 DPH3P1Q9H4G8 78 aa13.47□□□□□ -0.25
SS18-218ENST00000581021 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
SS18-218ENST00000581021 RYR1P21817 5038 aa13.46□□□□□ -0.25
SS18-218ENST00000581021 TRBV6-8A0A0A6YYG3 113 aa13.46□□□□□ -0.25
SS18-218ENST00000581021 A8MWL6 223 aa13.46□□□□□ -0.25
SS18-218ENST00000581021 DNAJC30Q96LL9 226 aa13.46□□□□□ -0.25
SS18-218ENST00000581021 V9GYV3 84 aa13.46□□□□□ -0.25
SS18-218ENST00000581021 APOBP04114 4563 aaKnown RBP13.45□□□□□ -0.26
SS18-218ENST00000581021 A0A087WTM6 91 aa13.45□□□□□ -0.26
SS18-218ENST00000581021 C16orf90A8MZG2 172 aa13.45□□□□□ -0.26
SS18-218ENST00000581021 PEA15Q15121 130 aa13.45□□□□□ -0.26
SS18-218ENST00000581021 TMEM241Q24JQ0 296 aa13.45□□□□□ -0.26
SS18-218ENST00000581021 FAM74A3Q4VXF1 159 aa13.45□□□□□ -0.26
SS18-218ENST00000581021 TSKUQ8WUA8 353 aa13.45□□□□□ -0.26
SS18-218ENST00000581021 TRAV26-2A0A0B4J265 109 aa13.44□□□□□ -0.26
SS18-218ENST00000581021 LAGE3Q14657 143 aa13.44□□□□□ -0.26
SS18-218ENST00000581021 HSPG2P98160 4391 aa13.43□□□□□ -0.26
SS18-218ENST00000581021 HIGD1CA8MV81 97 aa13.43□□□□□ -0.26
SS18-218ENST00000581021 RASL11AQ6T310 242 aa13.43□□□□□ -0.26
SS18-218ENST00000581021 SMDT1Q9H4I9 107 aa13.43□□□□□ -0.26
SS18-218ENST00000581021 NAT8Q9UHE5 227 aa13.43□□□□□ -0.26
SS18-218ENST00000581021 H7C1H1 209 aa13.42□□□□□ -0.26
SS18-218ENST00000581021 ADIRFQ15847 76 aa13.42□□□□□ -0.26
SS18-218ENST00000581021 GATD1Q8NB37 220 aa13.42□□□□□ -0.26
SS18-218ENST00000581021 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
SS18-218ENST00000581021 GFRA4Q9GZZ7 299 aa13.41□□□□□ -0.26
SS18-218ENST00000581021 IFITM2Q01629 132 aa13.4□□□□□ -0.26
SS18-218ENST00000581021 MPV17L2Q567V2 206 aa13.4□□□□□ -0.26
SS18-218ENST00000581021 DEFB104AQ8WTQ1 72 aa13.4□□□□□ -0.26
SS18-218ENST00000581021 KLK12Q9UKR0 248 aa13.4□□□□□ -0.26
SS18-218ENST00000581021 WFDC2Q14508 124 aa13.39□□□□□ -0.27
SS18-218ENST00000581021 C15orf54Q8N8G6 183 aa13.39□□□□□ -0.27
SS18-218ENST00000581021 RPL39LQ96EH5 51 aaKnown RBP13.39□□□□□ -0.27
SS18-218ENST00000581021 NIT2Q9NQR4 276 aa13.39□□□□□ -0.27
SS18-218ENST00000581021 A0A1B0GUT8 65 aa13.38□□□□□ -0.27
SS18-218ENST00000581021 FAM231BA6NCW3 169 aa13.38□□□□□ -0.27
SS18-218ENST00000581021 GAS8-AS1O95177 125 aa13.38□□□□□ -0.27
SS18-218ENST00000581021 MAPKAPK5-AS1Q8N8E1 139 aa13.38□□□□□ -0.27
SS18-218ENST00000581021 NUP35Q8NFH5 326 aa13.38□□□□□ -0.27
SS18-218ENST00000581021 CHCHD7Q9BUK0 85 aa13.38□□□□□ -0.27
SS18-218ENST00000581021 URGCP-MRPS24S4R325 110 aa13.38□□□□□ -0.27
SS18-218ENST00000581021 A0A087WX48 190 aa13.37□□□□□ -0.27
SS18-218ENST00000581021 IQCJQ1A5X6 159 aa13.37□□□□□ -0.27
SS18-218ENST00000581021 Q8N976 141 aa13.37□□□□□ -0.27
SS18-218ENST00000581021 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
SS18-218ENST00000581021 TMEM262E9PQX1 116 aa13.36□□□□□ -0.27
SS18-218ENST00000581021 PSCAO43653 123 aa13.36□□□□□ -0.27
SS18-218ENST00000581021 GAGE6Q13070 117 aa13.36□□□□□ -0.27
SS18-218ENST00000581021 RNF185Q96GF1 192 aa13.36□□□□□ -0.27
SS18-218ENST00000581021 KRTAP17-1Q9BYP8 105 aa13.36□□□□□ -0.27
SS18-218ENST00000581021 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
SS18-218ENST00000581021 TMEM97Q5BJF2 176 aa13.35□□□□□ -0.27
SS18-218ENST00000581021 CLLU1Q5K131 121 aa13.35□□□□□ -0.27
SS18-218ENST00000581021 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.35□□□□□ -0.27
SS18-218ENST00000581021 UBE2WQ96B02 151 aa13.35□□□□□ -0.27
SS18-218ENST00000581021 TRBV25-1A0A075B6N4 114 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 SMIM27A0A1W2PRY6 76 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 RAB14P61106 215 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 ATRAIDQ6UW56 229 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 ENHOQ6UWT2 76 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 BORCS7Q96B45 105 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 TMEM191AQ9H0A3 160 aa13.34□□□□□ -0.27
SS18-218ENST00000581021 IGHV1-24A0A0C4DH33 117 aa13.33□□□□□ -0.28
SS18-218ENST00000581021 EREGO14944 169 aa13.33□□□□□ -0.28
SS18-218ENST00000581021 RBX1P62877 108 aa13.33□□□□□ -0.28
SS18-218ENST00000581021 FRZBQ92765 325 aa13.33□□□□□ -0.28
SS18-218ENST00000581021 AMN1Q8IY45 258 aa13.32□□□□□ -0.28
SS18-218ENST00000581021 TM2D2Q9BX73 214 aa13.32□□□□□ -0.28
SS18-218ENST00000581021 PGPEP1Q9NXJ5 209 aa13.32□□□□□ -0.28
SS18-218ENST00000581021 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
SS18-218ENST00000581021 LECT2O14960 151 aa13.31□□□□□ -0.28
SS18-218ENST00000581021 RAB4AP20338 218 aa13.31□□□□□ -0.28
SS18-218ENST00000581021 RPS10P46783 165 aaKnown RBP13.31□□□□□ -0.28
SS18-218ENST00000581021 KCNIP4Q6PIL6 250 aa13.31□□□□□ -0.28
SS18-218ENST00000581021 Q8N814 137 aa13.31□□□□□ -0.28
SS18-218ENST00000581021 IGKV2D-24A0A075B6R9 120 aa13.3□□□□□ -0.28
SS18-218ENST00000581021 ANGP03950 147 aaKnown RBP13.3□□□□□ -0.28
SS18-218ENST00000581021 ELOBQ15370 118 aa13.3□□□□□ -0.28
SS18-218ENST00000581021 CDPF1Q6NVV7 123 aa13.3□□□□□ -0.28
SS18-218ENST00000581021 TMEM243Q9BU79 118 aa13.3□□□□□ -0.28
SS18-218ENST00000581021 CDK2AP2O75956 126 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms