RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 MDFICQ9P1T7 246 aa6.99□□□□□ -1.29
GGA3-209ENST00000580646 DEFB131BA0A096LNP1 70 aa6.98□□□□□ -1.29
GGA3-209ENST00000580646 C19orf71A6NCJ1 209 aa6.98□□□□□ -1.29
GGA3-209ENST00000580646 RNASE3P12724 160 aaKnown RBP6.98□□□□□ -1.29
GGA3-209ENST00000580646 ASIPP42127 132 aa6.98□□□□□ -1.29
GGA3-209ENST00000580646 Q6ZTI0 123 aa6.98□□□□□ -1.29
GGA3-209ENST00000580646 SMIM7Q9BQ49 75 aa6.98□□□□□ -1.29
GGA3-209ENST00000580646 IGHV4-4A0A075B6R2 117 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 TRGV1A0A0A0MS02 117 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 GAGE12BA1L429 117 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 J3QR89 54 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 GAGE7O76087 117 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 GAGE12FP0CL80 117 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 GAGE12GP0CL81 117 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 GAGE12IP0CL82 117 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 DEFB130BP0DP73 79 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 DEFB130AP0DP74 79 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 MGST1P10620 155 aaKnown RBP6.97□□□□□ -1.29
GGA3-209ENST00000580646 S100A4P26447 101 aaKnown RBP6.97□□□□□ -1.29
GGA3-209ENST00000580646 MRPL54Q6P161 138 aaKnown RBP6.97□□□□□ -1.29
GGA3-209ENST00000580646 FAM231DQ6ZW35 169 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 OCC1Q8TAD7 63 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 DAZAP1Q96EP5 407 aaKnown RBP6.97□□□□□ -1.29
GGA3-209ENST00000580646 SFRP2Q96HF1 295 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 SAMD10Q9BYL1 202 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 SCRT2Q9NQ03 307 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 TRAPPC1Q9Y5R8 145 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
GGA3-209ENST00000580646 TRGV2A0A075B6R0 118 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 PGPEP1LA6NFU8 196 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 P01737 135 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 SLAQ13239 276 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 ADIRFQ15847 76 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 COX19Q49B96 90 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 DNAH6Q9C0G6 4158 aa6.96□□□□□ -1.3
GGA3-209ENST00000580646 TRAV4A0A0B4J268 109 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 H3BNG1 76 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 K7EN84 100 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 SNAI2O43623 268 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 OR5AL1P0C617 328 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 ARMS2P0C7Q2 107 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 Q0VG73 95 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 FER1L6-AS1Q8NA97 138 aa6.95□□□□□ -1.3
GGA3-209ENST00000580646 MRPL16Q9NX20 251 aaKnown RBP6.95□□□□□ -1.3
GGA3-209ENST00000580646 H3BVH4 76 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 HINT1P49773 126 aaPredicted RBP6.94□□□□□ -1.3
GGA3-209ENST00000580646 CKS1BP61024 79 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 CT83Q5H943 113 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 SYT8Q8NBV8 401 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 OR5A1Q8NGJ0 315 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 MRAP2Q96G30 205 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 SPANXA1Q9NS26 97 aa6.94□□□□□ -1.3
GGA3-209ENST00000580646 TMSB15BA0A087X1C1 80 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 GRIFINA4D1Z8 144 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 A8MWV9 139 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 NXPH4O95158 308 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 IGLC6P0CF74 106 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 ZFP2Q6ZN57 461 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 AP1S3Q96PC3 154 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 RPP21Q9H633 154 aaKnown RBP6.93□□□□□ -1.3
GGA3-209ENST00000580646 OSTCQ9NRP0 149 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 PHLDA3Q9Y5J5 127 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
GGA3-209ENST00000580646 F2Z2F3 143 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 F5H768 121 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 RS1O15537 224 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 MT-ND6P03923 174 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 P0DMU3 169 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 HTN3P15516 51 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 CRYBA4P53673 196 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 RPL23P62829 140 aaKnown RBP6.92□□□□□ -1.3
GGA3-209ENST00000580646 CFAP126Q5VTH2 177 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 POM121L12Q8N7R1 296 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 PMCHL2Q9BQD1 86 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 RNASE7Q9H1E1 156 aaKnown RBP6.92□□□□□ -1.3
GGA3-209ENST00000580646 ST20Q9HBF5 79 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 PRO0255Q9UI72 69 aa6.92□□□□□ -1.3
GGA3-209ENST00000580646 TRAV9-2A0A087WT02 112 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 FAM231BA6NCW3 169 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 A6NDN8 102 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 GAGE10A6NGK3 116 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 A8MWL6 223 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 RHODO00212 210 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 FOXA3P55318 350 aaPredicted RBP6.91□□□□□ -1.3
GGA3-209ENST00000580646 KRTDAPP60985 99 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 CACNG7P62955 275 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 SEC11AP67812 179 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 FHL2Q14192 279 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 OR10J3Q5JRS4 329 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 FA2HQ7L5A8 372 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
GGA3-209ENST00000580646 GFRA4Q9GZZ7 299 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms