RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 HLA-DQA1P01909 254 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 TCTAP57738 103 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 GAGE1Q13065 139 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 GAGE4Q13068 117 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 GAGE5Q13069 117 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 CASC10Q5T4H9 136 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 NEXN-AS1Q8NBZ9 246 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 NIT2Q9NQR4 276 aa11.06□□□□□ -0.64
CSNK1D-212ENST00000580061 SMKR1H3BMG3 65 aa11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 NUDT3O95989 172 aa11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 MT-ND6P03923 174 aa11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 LINC00694P0DN24 101 aa11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 DNAJC30Q96LL9 226 aa11.05□□□□□ -0.64
CSNK1D-212ENST00000580061 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
CSNK1D-212ENST00000580061 NCR2O95944 276 aa11.04□□□□□ -0.64
CSNK1D-212ENST00000580061 SRIP30626 198 aa11.04□□□□□ -0.64
CSNK1D-212ENST00000580061 CKS2P33552 79 aa11.04□□□□□ -0.64
CSNK1D-212ENST00000580061 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
CSNK1D-212ENST00000580061 COLCA2A8K830 154 aa11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 D6R8Y8 96 aa11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 APCSP02743 223 aa11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 PPBPP02775 128 aa11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 RPS10P46783 165 aaKnown RBP11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 NRACQ8N912 160 aa11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 MRPL18Q9H0U6 180 aaKnown RBP11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
CSNK1D-212ENST00000580061 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 UBE2D3P61077 147 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 UBE2D2P62837 147 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 NEGR1Q7Z3B1 354 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 ORMDL3Q8N138 153 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 TENM2Q9NT68 2774 aa11.02□□□□□ -0.65
CSNK1D-212ENST00000580061 PPP1R17O96001 155 aa11.01□□□□□ -0.65
CSNK1D-212ENST00000580061 SH2D6Q7Z4S9 175 aa11.01□□□□□ -0.65
CSNK1D-212ENST00000580061 ATP6V0E2Q8NHE4 81 aa11.01□□□□□ -0.65
CSNK1D-212ENST00000580061 KIAA1644Q3SXP7 199 aa11□□□□□ -0.65
CSNK1D-212ENST00000580061 LYSTQ99698 3801 aa11□□□□□ -0.65
CSNK1D-212ENST00000580061 TNFRSF6BO95407 300 aa10.99□□□□□ -0.65
CSNK1D-212ENST00000580061 NPYP01303 97 aa10.99□□□□□ -0.65
CSNK1D-212ENST00000580061 FABP9Q0Z7S8 132 aa10.99□□□□□ -0.65
CSNK1D-212ENST00000580061 PRELID3AQ96N28 172 aa10.99□□□□□ -0.65
CSNK1D-212ENST00000580061 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
CSNK1D-212ENST00000580061 IGHV3-38A0A0C4DH36 116 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 SDHAF1A6NFY7 115 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 PHOX2AO14813 284 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 RAB5AP20339 215 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 ESRGQ1W209 222 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 LYPD5Q6UWN5 251 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 GTSF1LQ9H1H1 148 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 LAMTOR2Q9Y2Q5 125 aa10.98□□□□□ -0.65
CSNK1D-212ENST00000580061 POLR2KP53803 58 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-212ENST00000580061 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
CSNK1D-212ENST00000580061 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
CSNK1D-212ENST00000580061 TMEM70Q9BUB7 260 aa10.97□□□□□ -0.65
CSNK1D-212ENST00000580061 TIRAPP58753 221 aa10.96□□□□□ -0.65
CSNK1D-212ENST00000580061 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.96□□□□□ -0.65
CSNK1D-212ENST00000580061 ALKBH7Q9BT30 221 aaPredicted RBP10.96□□□□□ -0.65
CSNK1D-212ENST00000580061 VPS13DQ5THJ4 4388 aa10.96□□□□□ -0.66
CSNK1D-212ENST00000580061 PRSS47A8MTI9 375 aa10.95□□□□□ -0.66
CSNK1D-212ENST00000580061 CCL18P55774 89 aa10.95□□□□□ -0.66
CSNK1D-212ENST00000580061 LINC00588Q9Y4M8 146 aa10.95□□□□□ -0.66
CSNK1D-212ENST00000580061 TRBV27A0A0K0K1C4 114 aa10.94□□□□□ -0.66
CSNK1D-212ENST00000580061 I3L3M4 83 aa10.94□□□□□ -0.66
CSNK1D-212ENST00000580061 VCYO14598 125 aa10.94□□□□□ -0.66
CSNK1D-212ENST00000580061 TRGC2P03986 189 aa10.94□□□□□ -0.66
CSNK1D-212ENST00000580061 RPL32P62910 135 aaKnown RBP10.94□□□□□ -0.66
CSNK1D-212ENST00000580061 MAP1LC3AQ9H492 121 aa10.94□□□□□ -0.66
CSNK1D-212ENST00000580061 DNAH1Q9P2D7 4330 aa10.93□□□□□ -0.66
CSNK1D-212ENST00000580061 ALMS1Q8TCU4 4167 aa10.93□□□□□ -0.66
CSNK1D-212ENST00000580061 PMCHP20382 165 aa10.93□□□□□ -0.66
CSNK1D-212ENST00000580061 TMEM97Q5BJF2 176 aa10.93□□□□□ -0.66
CSNK1D-212ENST00000580061 LELP1Q5T871 98 aa10.93□□□□□ -0.66
CSNK1D-212ENST00000580061 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
CSNK1D-212ENST00000580061 SMIM2Q9BVW6 85 aa10.93□□□□□ -0.66
CSNK1D-212ENST00000580061 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
CSNK1D-212ENST00000580061 LOC389332A0A1B0GUA5 103 aa10.92□□□□□ -0.66
CSNK1D-212ENST00000580061 COTL1Q14019 142 aa10.92□□□□□ -0.66
CSNK1D-212ENST00000580061 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
CSNK1D-212ENST00000580061 MRPS16Q9Y3D3 137 aaKnown RBP10.92□□□□□ -0.66
CSNK1D-212ENST00000580061 IGLV2-18A0A075B6J9 118 aa10.91□□□□□ -0.66
CSNK1D-212ENST00000580061 LGALS9CQ6DKI2 356 aa10.91□□□□□ -0.66
CSNK1D-212ENST00000580061 UBE2DNLQ8IWF7 75 aa10.91□□□□□ -0.66
CSNK1D-212ENST00000580061 UPK3BQ9BT76 320 aa10.91□□□□□ -0.66
CSNK1D-212ENST00000580061 TSHBP01222 138 aa10.9□□□□□ -0.66
CSNK1D-212ENST00000580061 IQCJQ1A5X6 159 aa10.9□□□□□ -0.66
CSNK1D-212ENST00000580061 KIR2DL4Q99706 377 aa10.9□□□□□ -0.66
CSNK1D-212ENST00000580061 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
CSNK1D-212ENST00000580061 IGHV1-24A0A0C4DH33 117 aa10.89□□□□□ -0.67
CSNK1D-212ENST00000580061 Q8N8P6 123 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms