RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 RBFOX3A6NFN3 312 aa10.34□□□□□ -0.75
SF3B3-215ENST00000577085 IGLV2-8P01709 118 aa10.34□□□□□ -0.75
SF3B3-215ENST00000577085 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
SF3B3-215ENST00000577085 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 TRBV6-8A0A0A6YYG3 113 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 F2Z2F3 143 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 H7C1H1 209 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 PKIAP61925 76 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 CHCHD5Q9BSY4 110 aa10.33□□□□□ -0.76
SF3B3-215ENST00000577085 DNAH5Q8TE73 4624 aa10.32□□□□□ -0.76
SF3B3-215ENST00000577085 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
SF3B3-215ENST00000577085 EPM2AB3EWF7 344 aa10.32□□□□□ -0.76
SF3B3-215ENST00000577085 LECT2O14960 151 aa10.32□□□□□ -0.76
SF3B3-215ENST00000577085 CRPP02741 224 aa10.32□□□□□ -0.76
SF3B3-215ENST00000577085 BLOC1S1P78537 153 aa10.32□□□□□ -0.76
SF3B3-215ENST00000577085 ALKAL2Q6UX46 152 aa10.32□□□□□ -0.76
SF3B3-215ENST00000577085 APOBP04114 4563 aaKnown RBP10.31□□□□□ -0.76
SF3B3-215ENST00000577085 ABCA13Q86UQ4 5058 aa10.31□□□□□ -0.76
SF3B3-215ENST00000577085 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
SF3B3-215ENST00000577085 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
SF3B3-215ENST00000577085 Q0VG73 95 aa10.31□□□□□ -0.76
SF3B3-215ENST00000577085 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
SF3B3-215ENST00000577085 LYZL1Q6UWQ5 148 aa10.3□□□□□ -0.76
SF3B3-215ENST00000577085 C15orf54Q8N8G6 183 aa10.3□□□□□ -0.76
SF3B3-215ENST00000577085 BAALCQ8WXS3 180 aa10.3□□□□□ -0.76
SF3B3-215ENST00000577085 FRZBQ92765 325 aa10.3□□□□□ -0.76
SF3B3-215ENST00000577085 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
SF3B3-215ENST00000577085 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
SF3B3-215ENST00000577085 XGP55808 180 aa10.29□□□□□ -0.76
SF3B3-215ENST00000577085 NUDT10Q8NFP7 164 aa10.29□□□□□ -0.76
SF3B3-215ENST00000577085 NUDT11Q96G61 164 aa10.29□□□□□ -0.76
SF3B3-215ENST00000577085 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
SF3B3-215ENST00000577085 C1orf43Q9BWL3 253 aa10.29□□□□□ -0.76
SF3B3-215ENST00000577085 RPP21Q9H633 154 aaKnown RBP10.29□□□□□ -0.76
SF3B3-215ENST00000577085 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-215ENST00000577085 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
SF3B3-215ENST00000577085 CEBPGP53567 150 aa10.28□□□□□ -0.76
SF3B3-215ENST00000577085 TWIST1Q15672 202 aa10.28□□□□□ -0.76
SF3B3-215ENST00000577085 Q8N976 141 aa10.28□□□□□ -0.76
SF3B3-215ENST00000577085 TMEM70Q9BUB7 260 aa10.28□□□□□ -0.76
SF3B3-215ENST00000577085 DPH3P1Q9H4G8 78 aa10.28□□□□□ -0.76
SF3B3-215ENST00000577085 M0QY20 66 aa10.27□□□□□ -0.77
SF3B3-215ENST00000577085 NTF3P20783 257 aa10.27□□□□□ -0.77
SF3B3-215ENST00000577085 WFDC2Q14508 124 aa10.27□□□□□ -0.77
SF3B3-215ENST00000577085 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
SF3B3-215ENST00000577085 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
SF3B3-215ENST00000577085 RNASE7Q9H1E1 156 aaKnown RBP10.27□□□□□ -0.77
SF3B3-215ENST00000577085 IGHV1-24A0A0C4DH33 117 aa10.26□□□□□ -0.77
SF3B3-215ENST00000577085 TMEM250H0YL14 139 aa10.26□□□□□ -0.77
SF3B3-215ENST00000577085 NKX2-5P52952 324 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-215ENST00000577085 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
SF3B3-215ENST00000577085 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
SF3B3-215ENST00000577085 OCC1Q8TAD7 63 aa10.26□□□□□ -0.77
SF3B3-215ENST00000577085 EIF5A2Q9GZV4 153 aaKnown RBP10.26□□□□□ -0.77
SF3B3-215ENST00000577085 CTRLP40313 264 aa10.25□□□□□ -0.77
SF3B3-215ENST00000577085 GAGE6Q13070 117 aa10.25□□□□□ -0.77
SF3B3-215ENST00000577085 Q5VSD8 79 aa10.25□□□□□ -0.77
SF3B3-215ENST00000577085 WDR73Q6P4I2 378 aa10.25□□□□□ -0.77
SF3B3-215ENST00000577085 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
SF3B3-215ENST00000577085 K7EN84 100 aa10.24□□□□□ -0.77
SF3B3-215ENST00000577085 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-215ENST00000577085 HAMPP81172 84 aa10.24□□□□□ -0.77
SF3B3-215ENST00000577085 C14orf177Q52M58 125 aa10.24□□□□□ -0.77
SF3B3-215ENST00000577085 ATRAIDQ6UW56 229 aa10.24□□□□□ -0.77
SF3B3-215ENST00000577085 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
SF3B3-215ENST00000577085 GATCO43716 136 aaKnown RBP10.23□□□□□ -0.77
SF3B3-215ENST00000577085 HLA-DQA1P01909 254 aa10.23□□□□□ -0.77
SF3B3-215ENST00000577085 MIAQ16674 131 aa10.23□□□□□ -0.77
SF3B3-215ENST00000577085 ENHOQ6UWT2 76 aa10.23□□□□□ -0.77
SF3B3-215ENST00000577085 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
SF3B3-215ENST00000577085 UBE2L6O14933 153 aa10.22□□□□□ -0.77
SF3B3-215ENST00000577085 RBX1P62877 108 aa10.22□□□□□ -0.77
SF3B3-215ENST00000577085 IQCJQ1A5X6 159 aa10.22□□□□□ -0.77
SF3B3-215ENST00000577085 CLPSL2Q6UWE3 100 aa10.22□□□□□ -0.77
SF3B3-215ENST00000577085 LINC00269Q8N2A0 174 aa10.22□□□□□ -0.77
SF3B3-215ENST00000577085 BORCS7Q96B45 105 aa10.22□□□□□ -0.77
SF3B3-215ENST00000577085 TMEM243Q9BU79 118 aa10.22□□□□□ -0.77
SF3B3-215ENST00000577085 A8MWL6 223 aa10.21□□□□□ -0.77
SF3B3-215ENST00000577085 LYPD6BQ8NI32 183 aa10.21□□□□□ -0.77
SF3B3-215ENST00000577085 SMIM7Q9BQ49 75 aa10.21□□□□□ -0.77
SF3B3-215ENST00000577085 CNFNQ9BYD5 112 aa10.21□□□□□ -0.77
SF3B3-215ENST00000577085 INAFM2P0DMQ5 153 aa10.2□□□□□ -0.78
SF3B3-215ENST00000577085 COTL1Q14019 142 aa10.2□□□□□ -0.78
SF3B3-215ENST00000577085 FAM231DQ6ZW35 169 aa10.19□□□□□ -0.78
SF3B3-215ENST00000577085 GTSF1Q8WW33 167 aa10.19□□□□□ -0.78
SF3B3-215ENST00000577085 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
SF3B3-215ENST00000577085 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
SF3B3-215ENST00000577085 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 ZNF727A8MUV8 499 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 AMTP48728 403 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 REG3AQ06141 175 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 TEX261Q6UWH6 196 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 FAM210AQ96ND0 272 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
SF3B3-215ENST00000577085 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms