RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 PEA15Q15121 130 aa10.28□□□□□ -0.76
SMG6-220ENST00000576218 TMEM97Q5BJF2 176 aa10.28□□□□□ -0.76
SMG6-220ENST00000576218 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
SMG6-220ENST00000576218 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
SMG6-220ENST00000576218 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
SMG6-220ENST00000576218 Q8N3U1 123 aa10.28□□□□□ -0.76
SMG6-220ENST00000576218 CHCHD5Q9BSY4 110 aa10.28□□□□□ -0.76
SMG6-220ENST00000576218 TM2D2Q9BX73 214 aa10.28□□□□□ -0.76
SMG6-220ENST00000576218 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
SMG6-220ENST00000576218 TRAV8-3A0A0A6YYJ7 113 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 ELOBQ15370 118 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 WDR73Q6P4I2 378 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 LINC01551Q86U37 167 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 NIT1Q86X76 327 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 C15orf54Q8N8G6 183 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 PGLYRP4Q96LB8 373 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 FAT2Q9NYQ8 4349 aa10.27□□□□□ -0.77
SMG6-220ENST00000576218 DNAH17Q9UFH2 4485 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 A0A087WTM6 91 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 PKIAP61925 76 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 FAM74A3Q4VXF1 159 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 RMI2Q96E14 147 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 DNAJC30Q96LL9 226 aa10.26□□□□□ -0.77
SMG6-220ENST00000576218 ADIRFQ15847 76 aa10.25□□□□□ -0.77
SMG6-220ENST00000576218 TMEM241Q24JQ0 296 aa10.25□□□□□ -0.77
SMG6-220ENST00000576218 CT83Q5H943 113 aa10.25□□□□□ -0.77
SMG6-220ENST00000576218 GTSF1Q8WW33 167 aa10.25□□□□□ -0.77
SMG6-220ENST00000576218 CHCHD7Q9BUK0 85 aa10.25□□□□□ -0.77
SMG6-220ENST00000576218 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
SMG6-220ENST00000576218 TRBV25-1A0A075B6N4 114 aa10.24□□□□□ -0.77
SMG6-220ENST00000576218 M0QY20 66 aa10.24□□□□□ -0.77
SMG6-220ENST00000576218 CRPP02741 224 aa10.24□□□□□ -0.77
SMG6-220ENST00000576218 RAB14P61106 215 aa10.24□□□□□ -0.77
SMG6-220ENST00000576218 UBE2WQ96B02 151 aa10.24□□□□□ -0.77
SMG6-220ENST00000576218 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
SMG6-220ENST00000576218 PGPEP1Q9NXJ5 209 aa10.24□□□□□ -0.77
SMG6-220ENST00000576218 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
SMG6-220ENST00000576218 TSKUQ8WUA8 353 aa10.23□□□□□ -0.77
SMG6-220ENST00000576218 OSTCQ9NRP0 149 aa10.23□□□□□ -0.77
SMG6-220ENST00000576218 COX11Q9Y6N1 276 aa10.23□□□□□ -0.77
SMG6-220ENST00000576218 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
SMG6-220ENST00000576218 IGHV1-24A0A0C4DH33 117 aa10.22□□□□□ -0.77
SMG6-220ENST00000576218 HIGD1CA8MV81 97 aa10.22□□□□□ -0.77
SMG6-220ENST00000576218 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
SMG6-220ENST00000576218 SMDT1Q9H4I9 107 aa10.22□□□□□ -0.77
SMG6-220ENST00000576218 NIT2Q9NQR4 276 aa10.22□□□□□ -0.77
SMG6-220ENST00000576218 NAT8Q9UHE5 227 aa10.22□□□□□ -0.77
SMG6-220ENST00000576218 PKHD1P08F94 4074 aa10.22□□□□□ -0.77
SMG6-220ENST00000576218 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
SMG6-220ENST00000576218 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
SMG6-220ENST00000576218 FUSP35637 526 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMG6-220ENST00000576218 GFRA4Q9GZZ7 299 aa10.21□□□□□ -0.77
SMG6-220ENST00000576218 UBE2L6O14933 153 aa10.2□□□□□ -0.78
SMG6-220ENST00000576218 RPL23P62829 140 aaKnown RBP10.2□□□□□ -0.78
SMG6-220ENST00000576218 SRSF3P84103 164 aaKnown RBP10.2□□□□□ -0.78
SMG6-220ENST00000576218 Q0VG73 95 aa10.2□□□□□ -0.78
SMG6-220ENST00000576218 GAGE6Q13070 117 aa10.2□□□□□ -0.78
SMG6-220ENST00000576218 MPV17L2Q567V2 206 aa10.2□□□□□ -0.78
SMG6-220ENST00000576218 ISOC2Q96AB3 205 aa10.2□□□□□ -0.78
SMG6-220ENST00000576218 PKD1P98161 4303 aa10.2□□□□□ -0.78
SMG6-220ENST00000576218 IGLV5-52A0A0A0MRZ9 124 aa10.19□□□□□ -0.78
SMG6-220ENST00000576218 COTL1Q14019 142 aa10.19□□□□□ -0.78
SMG6-220ENST00000576218 FAM231BA6NCW3 169 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 C9JQL5 133 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 LECT2O14960 151 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 AMTP48728 403 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 FOXA3P55318 350 aaPredicted RBP10.18□□□□□ -0.78
SMG6-220ENST00000576218 RIGQ13278 110 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 Q8N976 141 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 GATD1Q8NB37 220 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 FRZBQ92765 325 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
SMG6-220ENST00000576218 CDK2AP2O75956 126 aa10.17□□□□□ -0.78
SMG6-220ENST00000576218 IQCJQ1A5X6 159 aa10.17□□□□□ -0.78
SMG6-220ENST00000576218 ATRAIDQ6UW56 229 aa10.17□□□□□ -0.78
SMG6-220ENST00000576218 Q8N814 137 aa10.17□□□□□ -0.78
SMG6-220ENST00000576218 NTN5Q8WTR8 489 aaPredicted RBP10.17□□□□□ -0.78
SMG6-220ENST00000576218 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
SMG6-220ENST00000576218 V9GYV3 84 aa10.17□□□□□ -0.78
SMG6-220ENST00000576218 LRCOL1A6NCL2 159 aa10.16□□□□□ -0.78
SMG6-220ENST00000576218 CLPSL2Q6UWE3 100 aa10.16□□□□□ -0.78
SMG6-220ENST00000576218 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
SMG6-220ENST00000576218 RPL39LQ96EH5 51 aaKnown RBP10.16□□□□□ -0.78
SMG6-220ENST00000576218 GCSHP23434 173 aa10.15□□□□□ -0.78
SMG6-220ENST00000576218 RBX1P62877 108 aa10.15□□□□□ -0.78
SMG6-220ENST00000576218 HLA-DQA1P01909 254 aa10.14□□□□□ -0.79
SMG6-220ENST00000576218 LINC00269Q8N2A0 174 aa10.14□□□□□ -0.79
SMG6-220ENST00000576218 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
SMG6-220ENST00000576218 NUP35Q8NFH5 326 aa10.14□□□□□ -0.79
SMG6-220ENST00000576218 TMEM191AQ9H0A3 160 aa10.14□□□□□ -0.79
SMG6-220ENST00000576218 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.13□□□□□ -0.79
SMG6-220ENST00000576218 SDHAF1A6NFY7 115 aa10.13□□□□□ -0.79
SMG6-220ENST00000576218 APCSP02743 223 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms