RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.97□□□□□ -0.17
HCFC1R1-208ENST00000575214 H7C1H1 209 aa13.96□□□□□ -0.17
HCFC1R1-208ENST00000575214 TMEM241Q24JQ0 296 aa13.96□□□□□ -0.17
HCFC1R1-208ENST00000575214 SUMO4Q6EEV6 95 aa13.96□□□□□ -0.17
HCFC1R1-208ENST00000575214 Q8N3U1 123 aa13.96□□□□□ -0.17
HCFC1R1-208ENST00000575214 IBA57-AS1B1ANH7 110 aa13.96□□□□□ -0.18
HCFC1R1-208ENST00000575214 PGLYRP4Q96LB8 373 aa13.96□□□□□ -0.18
HCFC1R1-208ENST00000575214 SMDT1Q9H4I9 107 aa13.96□□□□□ -0.18
HCFC1R1-208ENST00000575214 DNAH11Q96DT5 4516 aa13.95□□□□□ -0.18
HCFC1R1-208ENST00000575214 M0QY20 66 aa13.95□□□□□ -0.18
HCFC1R1-208ENST00000575214 C15orf54Q8N8G6 183 aa13.95□□□□□ -0.18
HCFC1R1-208ENST00000575214 Q9HAA7 133 aa13.95□□□□□ -0.18
HCFC1R1-208ENST00000575214 OSTCQ9NRP0 149 aa13.95□□□□□ -0.18
HCFC1R1-208ENST00000575214 URGCP-MRPS24S4R325 110 aa13.95□□□□□ -0.18
HCFC1R1-208ENST00000575214 DYNC1H1Q14204 4646 aaKnown RBP13.94□□□□□ -0.18
HCFC1R1-208ENST00000575214 SMIM15Q7Z3B0 74 aa13.94□□□□□ -0.18
HCFC1R1-208ENST00000575214 SPATA12Q7Z6I5 190 aa13.94□□□□□ -0.18
HCFC1R1-208ENST00000575214 RAB14P61106 215 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 RPL23P62829 140 aaKnown RBP13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 ADIRFQ15847 76 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 NIT1Q86X76 327 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 TSKUQ8WUA8 353 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 ISOC2Q96AB3 205 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 BORCS7Q96B45 105 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 DNAJC30Q96LL9 226 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 NAT8Q9UHE5 227 aa13.93□□□□□ -0.18
HCFC1R1-208ENST00000575214 TRBV6-8A0A0A6YYG3 113 aa13.92□□□□□ -0.18
HCFC1R1-208ENST00000575214 C16orf90A8MZG2 172 aa13.92□□□□□ -0.18
HCFC1R1-208ENST00000575214 KCNIP4Q6PIL6 250 aa13.92□□□□□ -0.18
HCFC1R1-208ENST00000575214 RASL11AQ6T310 242 aa13.92□□□□□ -0.18
HCFC1R1-208ENST00000575214 DAZ4Q86SG3 579 aaKnown RBP13.92□□□□□ -0.18
HCFC1R1-208ENST00000575214 DAZ3Q9NR90 486 aaKnown RBP13.92□□□□□ -0.18
HCFC1R1-208ENST00000575214 A0A087WX48 190 aa13.91□□□□□ -0.18
HCFC1R1-208ENST00000575214 EREGO14944 169 aa13.91□□□□□ -0.18
HCFC1R1-208ENST00000575214 PSCAO43653 123 aa13.91□□□□□ -0.18
HCFC1R1-208ENST00000575214 FOXA3P55318 350 aaPredicted RBP13.91□□□□□ -0.18
HCFC1R1-208ENST00000575214 LAGE3Q14657 143 aa13.91□□□□□ -0.18
HCFC1R1-208ENST00000575214 GFRA4Q9GZZ7 299 aa13.91□□□□□ -0.18
HCFC1R1-208ENST00000575214 HIGD1CA8MV81 97 aa13.9□□□□□ -0.18
HCFC1R1-208ENST00000575214 TMEM97Q5BJF2 176 aa13.9□□□□□ -0.18
HCFC1R1-208ENST00000575214 V9GYV3 84 aa13.9□□□□□ -0.18
HCFC1R1-208ENST00000575214 TMEM262E9PQX1 116 aa13.89□□□□□ -0.19
HCFC1R1-208ENST00000575214 FAM231BA6NCW3 169 aa13.88□□□□□ -0.19
HCFC1R1-208ENST00000575214 KRTAP10-2P60368 255 aa13.88□□□□□ -0.19
HCFC1R1-208ENST00000575214 CHCHD5Q9BSY4 110 aa13.88□□□□□ -0.19
HCFC1R1-208ENST00000575214 CHCHD7Q9BUK0 85 aa13.88□□□□□ -0.19
HCFC1R1-208ENST00000575214 NIT2Q9NQR4 276 aa13.88□□□□□ -0.19
HCFC1R1-208ENST00000575214 A0A087WTM6 91 aa13.87□□□□□ -0.19
HCFC1R1-208ENST00000575214 TRAV8-3A0A0A6YYJ7 113 aa13.87□□□□□ -0.19
HCFC1R1-208ENST00000575214 TRAV26-2A0A0B4J265 109 aa13.87□□□□□ -0.19
HCFC1R1-208ENST00000575214 A0A1B0GUT8 65 aa13.87□□□□□ -0.19
HCFC1R1-208ENST00000575214 NTM-AS1Q6ZSK4 140 aa13.86□□□□□ -0.19
HCFC1R1-208ENST00000575214 GATD1Q8NB37 220 aa13.86□□□□□ -0.19
HCFC1R1-208ENST00000575214 KLK12Q9UKR0 248 aa13.86□□□□□ -0.19
HCFC1R1-208ENST00000575214 TRBV25-1A0A075B6N4 114 aa13.85□□□□□ -0.19
HCFC1R1-208ENST00000575214 ELOBQ15370 118 aa13.85□□□□□ -0.19
HCFC1R1-208ENST00000575214 TM2D2Q9BX73 214 aa13.85□□□□□ -0.19
HCFC1R1-208ENST00000575214 HERC2O95714 4834 aa13.84□□□□□ -0.19
HCFC1R1-208ENST00000575214 PKIAP61925 76 aa13.84□□□□□ -0.19
HCFC1R1-208ENST00000575214 IGHV1-24A0A0C4DH33 117 aa13.83□□□□□ -0.19
HCFC1R1-208ENST00000575214 MPV17L2Q567V2 206 aa13.83□□□□□ -0.19
HCFC1R1-208ENST00000575214 NUP35Q8NFH5 326 aa13.83□□□□□ -0.19
HCFC1R1-208ENST00000575214 FRZBQ92765 325 aa13.83□□□□□ -0.19
HCFC1R1-208ENST00000575214 KIAA1109Q2LD37 5005 aa13.83□□□□□ -0.2
HCFC1R1-208ENST00000575214 RIGQ13278 110 aa13.83□□□□□ -0.2
HCFC1R1-208ENST00000575214 IQCJQ1A5X6 159 aa13.83□□□□□ -0.2
HCFC1R1-208ENST00000575214 CLLU1Q5K131 121 aa13.83□□□□□ -0.2
HCFC1R1-208ENST00000575214 UBE2WQ96B02 151 aa13.83□□□□□ -0.2
HCFC1R1-208ENST00000575214 NAT8BQ9UHF3 227 aa13.83□□□□□ -0.2
HCFC1R1-208ENST00000575214 GAGE6Q13070 117 aa13.82□□□□□ -0.2
HCFC1R1-208ENST00000575214 DEFB104AQ8WTQ1 72 aa13.82□□□□□ -0.2
HCFC1R1-208ENST00000575214 RPL39LQ96EH5 51 aaKnown RBP13.82□□□□□ -0.2
HCFC1R1-208ENST00000575214 TMEM191AQ9H0A3 160 aa13.82□□□□□ -0.2
HCFC1R1-208ENST00000575214 FUSP35637 526 aaKnown RBP eCLIP13.81□□□□□ -0.2
HCFC1R1-208ENST00000575214 RMI2Q96E14 147 aa13.81□□□□□ -0.2
HCFC1R1-208ENST00000575214 PGPEP1Q9NXJ5 209 aa13.81□□□□□ -0.2
HCFC1R1-208ENST00000575214 LRCOL1A6NCL2 159 aa13.8□□□□□ -0.2
HCFC1R1-208ENST00000575214 ANGP03950 147 aaKnown RBP13.8□□□□□ -0.2
HCFC1R1-208ENST00000575214 COTL1Q14019 142 aa13.8□□□□□ -0.2
HCFC1R1-208ENST00000575214 ATRAIDQ6UW56 229 aa13.8□□□□□ -0.2
HCFC1R1-208ENST00000575214 Q8N976 141 aa13.8□□□□□ -0.2
HCFC1R1-208ENST00000575214 IGKV2D-24A0A075B6R9 120 aa13.79□□□□□ -0.2
HCFC1R1-208ENST00000575214 SMIM27A0A1W2PRY6 76 aa13.79□□□□□ -0.2
HCFC1R1-208ENST00000575214 CRPP02741 224 aa13.79□□□□□ -0.2
HCFC1R1-208ENST00000575214 IFITM2Q01629 132 aa13.79□□□□□ -0.2
HCFC1R1-208ENST00000575214 TMEM243Q9BU79 118 aa13.79□□□□□ -0.2
HCFC1R1-208ENST00000575214 COX11Q9Y6N1 276 aa13.79□□□□□ -0.2
HCFC1R1-208ENST00000575214 LRP1BQ9NZR2 4599 aa13.78□□□□□ -0.2
HCFC1R1-208ENST00000575214 Q0VG73 95 aa13.78□□□□□ -0.2
HCFC1R1-208ENST00000575214 CDPF1Q6NVV7 123 aa13.78□□□□□ -0.2
HCFC1R1-208ENST00000575214 AMTP48728 403 aa13.77□□□□□ -0.21
HCFC1R1-208ENST00000575214 RBX1P62877 108 aa13.77□□□□□ -0.21
HCFC1R1-208ENST00000575214 AMN1Q8IY45 258 aa13.77□□□□□ -0.21
HCFC1R1-208ENST00000575214 RNF185Q96GF1 192 aa13.77□□□□□ -0.21
HCFC1R1-208ENST00000575214 SDHAF1A6NFY7 115 aa13.76□□□□□ -0.21
HCFC1R1-208ENST00000575214 RAB4AP20338 218 aa13.76□□□□□ -0.21
HCFC1R1-208ENST00000575214 DNAH5Q8TE73 4624 aa13.76□□□□□ -0.21
HCFC1R1-208ENST00000575214 UBE2L6O14933 153 aa13.75□□□□□ -0.21
HCFC1R1-208ENST00000575214 ENHOQ6UWT2 76 aa13.75□□□□□ -0.21
HCFC1R1-208ENST00000575214 MRAP2Q96G30 205 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 919.6 ms