RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 Q9UF83 564 aa10.05□□□□□ -0.8
NPLOC4-218ENST00000574964 DYNC2H1Q8NCM8 4307 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-218ENST00000574964 M0QY20 66 aa10.04□□□□□ -0.8
NPLOC4-218ENST00000574964 LYPD5Q6UWN5 251 aa10.04□□□□□ -0.8
NPLOC4-218ENST00000574964 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
NPLOC4-218ENST00000574964 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
NPLOC4-218ENST00000574964 URGCP-MRPS24S4R325 110 aa10.04□□□□□ -0.8
NPLOC4-218ENST00000574964 TRAV9-1A0A075B6T8 112 aa10.03□□□□□ -0.8
NPLOC4-218ENST00000574964 TRAV26-2A0A0B4J265 109 aa10.03□□□□□ -0.8
NPLOC4-218ENST00000574964 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
NPLOC4-218ENST00000574964 RAB4AP20338 218 aa10.03□□□□□ -0.8
NPLOC4-218ENST00000574964 GATD1Q8NB37 220 aa10.03□□□□□ -0.8
NPLOC4-218ENST00000574964 FRZBQ92765 325 aa10.03□□□□□ -0.8
NPLOC4-218ENST00000574964 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
NPLOC4-218ENST00000574964 UBE2D3P61077 147 aa10.02□□□□□ -0.81
NPLOC4-218ENST00000574964 UBE2D2P62837 147 aa10.02□□□□□ -0.81
NPLOC4-218ENST00000574964 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
NPLOC4-218ENST00000574964 MRAP2Q96G30 205 aa10.02□□□□□ -0.81
NPLOC4-218ENST00000574964 RNF185Q96GF1 192 aa10.02□□□□□ -0.81
NPLOC4-218ENST00000574964 GTSF1LQ9H1H1 148 aa10.02□□□□□ -0.81
NPLOC4-218ENST00000574964 PLECQ15149 4684 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-218ENST00000574964 LINC00694P0DN24 101 aa10.01□□□□□ -0.81
NPLOC4-218ENST00000574964 OR10J3Q5JRS4 329 aa10.01□□□□□ -0.81
NPLOC4-218ENST00000574964 MRPS16Q9Y3D3 137 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-218ENST00000574964 TRAV8-6A0A0B4J262 113 aa10□□□□□ -0.81
NPLOC4-218ENST00000574964 IGHV3-38A0A0C4DH36 116 aa10□□□□□ -0.81
NPLOC4-218ENST00000574964 CKS2P33552 79 aa10□□□□□ -0.81
NPLOC4-218ENST00000574964 TIRAPP58753 221 aa10□□□□□ -0.81
NPLOC4-218ENST00000574964 MRPL51Q4U2R6 128 aaKnown RBP10□□□□□ -0.81
NPLOC4-218ENST00000574964 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
NPLOC4-218ENST00000574964 RPL39LQ96EH5 51 aaKnown RBP10□□□□□ -0.81
NPLOC4-218ENST00000574964 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
NPLOC4-218ENST00000574964 NCR2O95944 276 aa9.99□□□□□ -0.81
NPLOC4-218ENST00000574964 PPP1R17O96001 155 aa9.99□□□□□ -0.81
NPLOC4-218ENST00000574964 LELP1Q5T871 98 aa9.99□□□□□ -0.81
NPLOC4-218ENST00000574964 SMKR1H3BMG3 65 aa9.98□□□□□ -0.81
NPLOC4-218ENST00000574964 COX19Q49B96 90 aa9.98□□□□□ -0.81
NPLOC4-218ENST00000574964 TMEM97Q5BJF2 176 aa9.98□□□□□ -0.81
NPLOC4-218ENST00000574964 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
NPLOC4-218ENST00000574964 UPK3BQ9BT76 320 aa9.98□□□□□ -0.81
NPLOC4-218ENST00000574964 ST20Q9HBF5 79 aa9.98□□□□□ -0.81
NPLOC4-218ENST00000574964 IGLV2-18A0A075B6J9 118 aa9.97□□□□□ -0.81
NPLOC4-218ENST00000574964 SIVA1O15304 175 aa9.97□□□□□ -0.81
NPLOC4-218ENST00000574964 Q9H8V8 135 aa9.97□□□□□ -0.81
NPLOC4-218ENST00000574964 D6R8Y8 96 aa9.96□□□□□ -0.82
NPLOC4-218ENST00000574964 GAS8-AS1O95177 125 aa9.96□□□□□ -0.82
NPLOC4-218ENST00000574964 PPBPP02775 128 aa9.96□□□□□ -0.82
NPLOC4-218ENST00000574964 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
NPLOC4-218ENST00000574964 ALMS1Q8TCU4 4167 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 TRBV6-5A0A0K0K1A5 114 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 SDHAF1A6NFY7 115 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 HLA-DQA1P01909 254 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 PMCHP20382 165 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 RPS10P46783 165 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 COTL1Q14019 142 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 ELOBQ15370 118 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 TMEM136Q6ZRR5 245 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 WFDC10BQ8IUB3 73 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
NPLOC4-218ENST00000574964 TRBV6-8A0A0A6YYG3 113 aa9.94□□□□□ -0.82
NPLOC4-218ENST00000574964 TGIF2-C20orf24A0A0A6YYL0 155 aa9.94□□□□□ -0.82
NPLOC4-218ENST00000574964 M0R2N4 97 aa9.94□□□□□ -0.82
NPLOC4-218ENST00000574964 GNB1LQ9BYB4 327 aa9.94□□□□□ -0.82
NPLOC4-218ENST00000574964 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 I3L3M4 83 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 TNFRSF6BO95407 300 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 APCSP02743 223 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 MT-ND6P03923 174 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 SUMO2P61956 95 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 NRACQ8N912 160 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 DEFB104AQ8WTQ1 72 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 PRELID3AQ96N28 172 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
NPLOC4-218ENST00000574964 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 IGHV1-24A0A0C4DH33 117 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 TMEM262E9PQX1 116 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 VCYO14598 125 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 TTC32Q5I0X7 151 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 CBLN2Q8IUK8 224 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 TMEM70Q9BUB7 260 aa9.92□□□□□ -0.82
NPLOC4-218ENST00000574964 NBDYA0A0U1RRE5 68 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 PHOX2AO14813 284 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 NPYP01303 97 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 IGHV3-33P01772 117 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 AMTP48728 403 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 POLR2KP53803 58 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 FABP9Q0Z7S8 132 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 C20orf78Q9BR46 151 aa9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-218ENST00000574964 A0A087WX48 190 aa9.9□□□□□ -0.82
NPLOC4-218ENST00000574964 UBE2L6O14933 153 aa9.9□□□□□ -0.82
NPLOC4-218ENST00000574964 DNAH10OSP0CZ25 163 aa9.9□□□□□ -0.82
NPLOC4-218ENST00000574964 FCER1GP30273 86 aa9.9□□□□□ -0.82
NPLOC4-218ENST00000574964 PKIAP61925 76 aa9.9□□□□□ -0.82
NPLOC4-218ENST00000574964 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms