RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 C18orf32Q8TCD1 76 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 TSKUQ8WUA8 353 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 B9D2Q9BPU9 175 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 C11orf1Q9H5F2 150 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 LINC00527Q9UJ94 153 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 HHLA3Q9XRX5 114 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 ZANQ9Y493 2812 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 NUPR1O60356 82 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 CD7P09564 240 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 HBBP68871 147 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 TRAV12-2A0A075B6T6 113 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 H3BT86 120 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 CD28P10747 220 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 Q6ZQT7 251 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 NABP2Q9BQ15 211 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 GCN1Q92616 2671 aaKnown RBP5.02□□□□□ -1.61
SMG1-217ENST00000569764 COX7A2LO14548 114 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 CCL18P55774 89 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 REG3GQ6UW15 175 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 E9PLD3 99 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 INS-IGF2F8WCM5 200 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 ZNF73O43830 326 aaPredicted RBP5.02□□□□□ -1.61
SMG1-217ENST00000569764 SFTA2Q6UW10 78 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 ACANP16112 2415 aa5.02□□□□□ -1.61
SMG1-217ENST00000569764 TRBV6-6A0A0A6YYG2 114 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 MDFIC2A0A1B0GVS7 189 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 A8MUN3 132 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 H3BVH4 76 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 SYNJ2BPP57105 145 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 RPL30P62888 115 aaKnown RBP5.01□□□□□ -1.61
SMG1-217ENST00000569764 SPATA12Q7Z6I5 190 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 RPP25LQ8N5L8 163 aaKnown RBP5.01□□□□□ -1.61
SMG1-217ENST00000569764 COPS9Q8WXC6 57 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 TNCP24821 2201 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 ZNF324O75467 553 aaPredicted RBP5.01□□□□□ -1.61
SMG1-217ENST00000569764 MRPL18Q9H0U6 180 aaKnown RBP5.01□□□□□ -1.61
SMG1-217ENST00000569764 SDF2L1Q9HCN8 221 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 NOTCH3Q9UM47 2321 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 EIF4EBP1Q13541 118 aaPredicted RBP5.01□□□□□ -1.61
SMG1-217ENST00000569764 NMSQ5H8A3 153 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 AQP10Q96PS8 301 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 TRBV19A0A075B6N1 114 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 TRAV2A0A0B4J234 112 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 NDUFA4O00483 81 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 IGKV1-5P01602 117 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 SCGB1C2P0DMR2 95 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 C15orf53Q8NAA6 179 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 MUC7Q8TAX7 377 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 NTN5Q8WTR8 489 aaPredicted RBP5.01□□□□□ -1.61
SMG1-217ENST00000569764 LEAP2Q969E1 77 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 PYGO2Q9BRQ0 406 aa5.01□□□□□ -1.61
SMG1-217ENST00000569764 C15orf62A8K5M9 175 aa5□□□□□ -1.61
SMG1-217ENST00000569764 UPK2O00526 184 aa5□□□□□ -1.61
SMG1-217ENST00000569764 TCL1BO95988 128 aa5□□□□□ -1.61
SMG1-217ENST00000569764 SPART-AS1P0CW21 52 aa5□□□□□ -1.61
SMG1-217ENST00000569764 PRCDQ00LT1 54 aa5□□□□□ -1.61
SMG1-217ENST00000569764 ERCC8Q13216 396 aa5□□□□□ -1.61
SMG1-217ENST00000569764 CIRBPQ14011 172 aaKnown RBP5□□□□□ -1.61
SMG1-217ENST00000569764 TAF15Q92804 592 aaKnown RBP eCLIP5□□□□□ -1.61
SMG1-217ENST00000569764 PRR15Q8IV56 129 aa5□□□□□ -1.61
SMG1-217ENST00000569764 C5orf56Q8N8D9 126 aa5□□□□□ -1.61
SMG1-217ENST00000569764 SHANK2-AS3Q9BTD1 123 aa5□□□□□ -1.61
SMG1-217ENST00000569764 LINC00473A8K010 186 aa5□□□□□ -1.61
SMG1-217ENST00000569764 SYS1-DBNDD2H3BUS1 97 aa5□□□□□ -1.61
SMG1-217ENST00000569764 LST1O00453 97 aa5□□□□□ -1.61
SMG1-217ENST00000569764 ATP6V0E1O15342 81 aa5□□□□□ -1.61
SMG1-217ENST00000569764 TIMM17BO60830 172 aa5□□□□□ -1.61
SMG1-217ENST00000569764 S100A4P26447 101 aaKnown RBP5□□□□□ -1.61
SMG1-217ENST00000569764 C15orf32Q32M92 178 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 LGALS9BQ3B8N2 356 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 IMUPQ9GZP8 106 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
SMG1-217ENST00000569764 FAM30AQ9NZY2 134 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 WNK1Q9H4A3 2382 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 IGKV3-7A0A075B6H7 116 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 K7EQD1 137 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 SAA2P0DJI9 122 aaPredicted RBP4.99□□□□□ -1.61
SMG1-217ENST00000569764 HTN3P15516 51 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 AMN1Q8IY45 258 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 TIMM8BQ9Y5J9 83 aaPredicted RBP4.99□□□□□ -1.61
SMG1-217ENST00000569764 PSCAO43653 123 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 HLA-DRB4P13762 266 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 CXCL5P42830 114 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 LYZP61626 148 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 FAM19A2Q8N3H0 131 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 SLC50A1Q9BRV3 221 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 HLA-DRB4X5D2U9 266 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 TENM4Q6N022 2769 aa4.99□□□□□ -1.61
SMG1-217ENST00000569764 LINC01548A6NM66 108 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 ODF3BA8MYP8 253 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 COX7CP15954 63 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 CD24P25063 80 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 YPEL3P61236 119 aaPredicted RBP4.98□□□□□ -1.61
SMG1-217ENST00000569764 NPBQ8NG41 125 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 TMEM243Q9BU79 118 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 C19orf73Q9NVV2 129 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 TMSB15BA0A087X1C1 80 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 LOC107984156A0A0G2JMH3 177 aa4.98□□□□□ -1.61
SMG1-217ENST00000569764 P0DMU3 169 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms