RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 OR10G7Q8NGN6 311 aa3.87□□□□□ -1.79
HERPUD1-217ENST00000569429 WFDC1Q9HC57 220 aa3.87□□□□□ -1.79
HERPUD1-217ENST00000569429 KCNIP2Q9NS61 270 aa3.87□□□□□ -1.79
HERPUD1-217ENST00000569429 TIMM9Q9Y5J7 89 aa3.87□□□□□ -1.79
HERPUD1-217ENST00000569429 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
HERPUD1-217ENST00000569429 IGHV3-73A0A0B4J1V6 119 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 TRBV7-9A0A0J9YWB2 115 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 KRBOX1C9JBD0 128 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 TEX46H3BTG2 121 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 H3BTX0 84 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 IGLC2P0DOY2 106 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 RPS10P46783 165 aaKnown RBP3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 GCSAMLQ5JQS6 135 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 C1orf137Q5JT78 98 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 RPL7L1Q6DKI1 246 aaKnown RBP3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 ALKAL2Q6UX46 152 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 OR2G3Q8NGZ4 309 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 SAMD10Q9BYL1 202 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 PRR34Q9NV39 138 aa3.86□□□□□ -1.79
HERPUD1-217ENST00000569429 RAB19A4D1S5 217 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 B5MCH6 92 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 H3BQ15 152 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 M0R3E3 92 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 HMGB3O15347 200 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 OR7C2O60412 319 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 MBP02144 154 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 MT-ND6P03923 174 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 ANGP03950 147 aaKnown RBP3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 IGLV7-43P04211 117 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 ATP6V0CP27449 155 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 RAB5CP51148 216 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 FGF8P55075 233 aaPredicted RBP3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 TAS2R45P59539 299 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 BLOC1S1P78537 153 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 AKR1C8PQ5T2L2 129 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 Q6AWC8 147 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 UQCC3Q6UW78 93 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 FAM159AQ6UWV7 190 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 MIR17HGQ75NE6 70 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 C9orf85Q96MD7 179 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 RETNLBQ9BQ08 111 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 ZNF492Q9P255 531 aa3.85□□□□□ -1.79
HERPUD1-217ENST00000569429 TMEM262E9PQX1 116 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 EIF3GO75821 320 aaKnown RBP eCLIP3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 NBEAP1P0C6P0 100 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 PYYP10082 97 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 SEC61BP60468 96 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 RAB2AP61019 212 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 RANP62826 216 aaKnown RBP3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 SERF2P84101 59 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 MPV17L2Q567V2 206 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 ACTR3CQ9C0K3 210 aaPredicted RBP3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 AAMDCQ9H7C9 122 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 Q9UF83 564 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 PRELID1Q9Y255 219 aa3.84□□□□□ -1.79
HERPUD1-217ENST00000569429 SCO2A0A1W2PP80 73 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 UMAD1C9J7I0 102 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 DIRC3C9JPN6 131 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 GNRH2O43555 120 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 HIST1H1EP10412 219 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 CSN1S1P47710 185 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 CDC34P49427 236 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 SULT1A2P50226 295 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 UBE2L3P68036 154 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 RNF151Q2KHN1 245 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 KHDC3LQ587J8 217 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 FAM74A1Q5RGS3 127 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 TMEM78Q5T7P6 136 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 CMTM2Q8TAZ6 248 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 PSMG3Q9BT73 122 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 SLC25A2Q9BXI2 301 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 GFRA4Q9GZZ7 299 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 RPP21Q9H633 154 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 CYTL1Q9NRR1 136 aa3.83□□□□□ -1.8
HERPUD1-217ENST00000569429 A0A1B0GV50 99 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 M0R2T5 61 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 CXorf1O96002 111 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 GZMBP10144 247 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 ZFP2Q6ZN57 461 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 EXOC3-AS1Q8N2X6 119 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 FAM213BQ8TBF2 198 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 SFT2D1Q8WV19 159 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 TMED6Q8WW62 240 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 PTH2Q96A98 100 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 PPDPFQ9H3Y8 114 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 TMEM14CQ9P0S9 112 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 PKIGQ9Y2B9 76 aa3.82□□□□□ -1.8
HERPUD1-217ENST00000569429 TRBV19A0A075B6N1 114 aa3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 KRTAP4-16G5E9R7 235 aaPredicted RBP3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 TYMSP04818 313 aa3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 ARL14EPLP0DKL9 152 aa3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 PKIAP61925 76 aa3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 PQLC2Q6ZP29 291 aa3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 LINC00173Q6ZV60 143 aa3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 SMDT1Q9H4I9 107 aa3.81□□□□□ -1.8
HERPUD1-217ENST00000569429 IGKV2-40A0A087WW87 121 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 TRAV8-4A0A0B4J246 113 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 CTXND1A0A1B0GTU2 59 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 TMEM218A2RU14 115 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms