RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 RBX1P62877 108 aa9.86□□□□□ -0.83
PKD1-236ENST00000568796 Q5BKY6 102 aa9.86□□□□□ -0.83
PKD1-236ENST00000568796 STOML3Q8TAV4 291 aa9.86□□□□□ -0.83
PKD1-236ENST00000568796 MAP1LC3BQ9GZQ8 125 aa9.86□□□□□ -0.83
PKD1-236ENST00000568796 MT1HL1P0DM35 61 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 TMEM97Q5BJF2 176 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 SPANXN1Q5VSR9 72 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 PRR27Q6MZM9 219 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 Q6ZRU5 148 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 NTM-AS1Q6ZSK4 140 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
PKD1-236ENST00000568796 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
PKD1-236ENST00000568796 TRBV25-1A0A075B6N4 114 aa9.84□□□□□ -0.83
PKD1-236ENST00000568796 FXYD6-FXYD2A0A087WZ82 144 aa9.84□□□□□ -0.83
PKD1-236ENST00000568796 TRBV6-1A0A0K0K1D8 114 aa9.84□□□□□ -0.83
PKD1-236ENST00000568796 hDV102S1A0JD36 115 aa9.84□□□□□ -0.83
PKD1-236ENST00000568796 CLRN3Q8NCR9 226 aa9.84□□□□□ -0.83
PKD1-236ENST00000568796 PRR34Q9NV39 138 aa9.84□□□□□ -0.83
PKD1-236ENST00000568796 SMIM17P0DL12 118 aa9.83□□□□□ -0.84
PKD1-236ENST00000568796 KRTAP26-1Q6PEX3 210 aa9.82□□□□□ -0.84
PKD1-236ENST00000568796 TCEAL7Q9BRU2 100 aa9.82□□□□□ -0.84
PKD1-236ENST00000568796 DPH3P1Q9H4G8 78 aa9.82□□□□□ -0.84
PKD1-236ENST00000568796 AP5S1Q9NUS5 200 aa9.82□□□□□ -0.84
PKD1-236ENST00000568796 IGHV3-64A0A075B6Q5 118 aa9.81□□□□□ -0.84
PKD1-236ENST00000568796 FHITP49789 147 aa9.81□□□□□ -0.84
PKD1-236ENST00000568796 REG3AQ06141 175 aa9.81□□□□□ -0.84
PKD1-236ENST00000568796 VAX2Q9UIW0 290 aa9.81□□□□□ -0.84
PKD1-236ENST00000568796 IGHV1-24A0A0C4DH33 117 aa9.8□□□□□ -0.84
PKD1-236ENST00000568796 SNAI2O43623 268 aa9.8□□□□□ -0.84
PKD1-236ENST00000568796 PAGE4O60829 102 aa9.8□□□□□ -0.84
PKD1-236ENST00000568796 CXCL1P09341 107 aa9.8□□□□□ -0.84
PKD1-236ENST00000568796 GIPP09681 153 aaPredicted RBP9.8□□□□□ -0.84
PKD1-236ENST00000568796 CHTF8P0CG12 524 aa9.8□□□□□ -0.84
PKD1-236ENST00000568796 RAB5CP51148 216 aa9.8□□□□□ -0.84
PKD1-236ENST00000568796 A0A087WYN8 130 aa9.79□□□□□ -0.84
PKD1-236ENST00000568796 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.79□□□□□ -0.84
PKD1-236ENST00000568796 S100A9P06702 114 aaKnown RBP9.79□□□□□ -0.84
PKD1-236ENST00000568796 MGPP08493 103 aa9.79□□□□□ -0.84
PKD1-236ENST00000568796 CNBPP62633 177 aaKnown RBP9.79□□□□□ -0.84
PKD1-236ENST00000568796 BAGE2Q86Y30 109 aa9.79□□□□□ -0.84
PKD1-236ENST00000568796 AP1S3Q96PC3 154 aa9.79□□□□□ -0.84
PKD1-236ENST00000568796 A0A1B0GV50 99 aa9.78□□□□□ -0.84
PKD1-236ENST00000568796 SCO2A0A1W2PP80 73 aa9.78□□□□□ -0.84
PKD1-236ENST00000568796 OR5AL1P0C617 328 aa9.78□□□□□ -0.84
PKD1-236ENST00000568796 IQCJQ1A5X6 159 aa9.78□□□□□ -0.84
PKD1-236ENST00000568796 RGS21Q2M5E4 152 aa9.78□□□□□ -0.84
PKD1-236ENST00000568796 SSBP4Q9BWG4 385 aaPredicted RBP9.78□□□□□ -0.84
PKD1-236ENST00000568796 TRAV8-4A0A0B4J246 113 aa9.77□□□□□ -0.85
PKD1-236ENST00000568796 PFDN1O60925 122 aa9.77□□□□□ -0.85
PKD1-236ENST00000568796 P01737 135 aa9.77□□□□□ -0.85
PKD1-236ENST00000568796 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
PKD1-236ENST00000568796 C20orf203Q8NBC4 194 aa9.77□□□□□ -0.85
PKD1-236ENST00000568796 RNF185Q96GF1 192 aa9.77□□□□□ -0.85
PKD1-236ENST00000568796 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
PKD1-236ENST00000568796 C7orf33Q8WU49 177 aa9.76□□□□□ -0.85
PKD1-236ENST00000568796 KIF25-AS1Q9Y6Z4 181 aa9.76□□□□□ -0.85
PKD1-236ENST00000568796 TNXBP22105 4242 aa9.76□□□□□ -0.85
PKD1-236ENST00000568796 LRP2P98164 4655 aa9.76□□□□□ -0.85
PKD1-236ENST00000568796 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 H7C1H1 209 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 PHOX2AO14813 284 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 SLPIP03973 132 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 NKX2-5P52952 324 aaPredicted RBP9.75□□□□□ -0.85
PKD1-236ENST00000568796 SPACA4Q8TDM5 124 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 SFT2D1Q8WV19 159 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 MLST8Q9BVC4 326 aa9.75□□□□□ -0.85
PKD1-236ENST00000568796 M0QY20 66 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 ARPC5O15511 151 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 SULT1A2P50226 295 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 WDR73Q6P4I2 378 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 FAM213BQ8TBF2 198 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 GFRA4Q9GZZ7 299 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 CYTL1Q9NRR1 136 aa9.74□□□□□ -0.85
PKD1-236ENST00000568796 UBE2L6O14933 153 aa9.73□□□□□ -0.85
PKD1-236ENST00000568796 GZMBP10144 247 aa9.73□□□□□ -0.85
PKD1-236ENST00000568796 IGKV2-24A0A0C4DH68 120 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 IGKV3OR2-268A0A0C4DH90 116 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 A0A1B0GUV1 79 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 COX6A2Q02221 97 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 TMUB2Q71RG4 321 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 PLAC8Q9NZF1 115 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
PKD1-236ENST00000568796 GAGE12HA6NDE8 117 aa9.71□□□□□ -0.86
PKD1-236ENST00000568796 CFAP161Q6P656 301 aa9.71□□□□□ -0.86
PKD1-236ENST00000568796 KCNRGQ8N5I3 272 aa9.71□□□□□ -0.86
PKD1-236ENST00000568796 FER1L6-AS1Q8NA97 138 aa9.71□□□□□ -0.86
PKD1-236ENST00000568796 RPL35P42766 123 aaKnown RBP9.7□□□□□ -0.86
PKD1-236ENST00000568796 HIGD2BQ4VC39 106 aa9.7□□□□□ -0.86
PKD1-236ENST00000568796 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
PKD1-236ENST00000568796 MBD3L1Q8WWY6 194 aa9.7□□□□□ -0.86
PKD1-236ENST00000568796 RPS10P46783 165 aaKnown RBP9.69□□□□□ -0.86
PKD1-236ENST00000568796 AMTP48728 403 aa9.69□□□□□ -0.86
PKD1-236ENST00000568796 CACNG7P62955 275 aa9.69□□□□□ -0.86
PKD1-236ENST00000568796 ODF1Q14990 250 aa9.69□□□□□ -0.86
PKD1-236ENST00000568796 C15orf56Q8N910 161 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms