RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 FMC1Q96HJ9 113 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 MAP1LC3BQ9GZQ8 125 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
NME3-211ENST00000568561 MUC21A0A0G2JKD1 596 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 MUC21A0A140T8X8 626 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 LTAP01374 205 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 OR10G8Q8NGN5 311 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 OR10AG1Q8NH19 301 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
NME3-211ENST00000568561 NKX6-2Q9C056 277 aaPredicted RBP10.03□□□□□ -0.8
NME3-211ENST00000568561 PRSS1P07477 247 aa10.02□□□□□ -0.81
NME3-211ENST00000568561 CST9LP1Q5W188 147 aa10.02□□□□□ -0.81
NME3-211ENST00000568561 DAZAP1Q96EP5 407 aaKnown RBP10.02□□□□□ -0.81
NME3-211ENST00000568561 UMAD1C9J7I0 102 aa10.01□□□□□ -0.81
NME3-211ENST00000568561 PANO1I0J062 215 aa10.01□□□□□ -0.81
NME3-211ENST00000568561 AKR1C3P42330 323 aa10.01□□□□□ -0.81
NME3-211ENST00000568561 SULT1A2P50226 295 aa10.01□□□□□ -0.81
NME3-211ENST00000568561 SSTP61278 116 aa10.01□□□□□ -0.81
NME3-211ENST00000568561 ALKAL2Q6UX46 152 aa10.01□□□□□ -0.81
NME3-211ENST00000568561 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.01□□□□□ -0.81
NME3-211ENST00000568561 TRBV6-1A0A0K0K1D8 114 aa10□□□□□ -0.81
NME3-211ENST00000568561 FHITP49789 147 aa10□□□□□ -0.81
NME3-211ENST00000568561 RAB5CP51148 216 aa10□□□□□ -0.81
NME3-211ENST00000568561 RAB4BP61018 213 aa10□□□□□ -0.81
NME3-211ENST00000568561 PRR27Q6MZM9 219 aa10□□□□□ -0.81
NME3-211ENST00000568561 NTM-AS1Q6ZSK4 140 aa9.99□□□□□ -0.81
NME3-211ENST00000568561 A0A1B0GV50 99 aa9.98□□□□□ -0.81
NME3-211ENST00000568561 F5H697 171 aa9.98□□□□□ -0.81
NME3-211ENST00000568561 PAGE4O60829 102 aa9.98□□□□□ -0.81
NME3-211ENST00000568561 GAGE6Q13070 117 aa9.98□□□□□ -0.81
NME3-211ENST00000568561 MIAQ16674 131 aa9.98□□□□□ -0.81
NME3-211ENST00000568561 RBX1P62877 108 aa9.97□□□□□ -0.81
NME3-211ENST00000568561 LINC00269Q8N2A0 174 aa9.97□□□□□ -0.81
NME3-211ENST00000568561 C9orf163Q8N9P6 203 aa9.97□□□□□ -0.81
NME3-211ENST00000568561 SCO2A0A1W2PP80 73 aa9.96□□□□□ -0.82
NME3-211ENST00000568561 KRTAP26-1Q6PEX3 210 aa9.96□□□□□ -0.82
NME3-211ENST00000568561 TCEAL7Q9BRU2 100 aa9.96□□□□□ -0.82
NME3-211ENST00000568561 IGLV10-54A0A075B6I4 117 aa9.95□□□□□ -0.82
NME3-211ENST00000568561 SNAI2O43623 268 aa9.95□□□□□ -0.82
NME3-211ENST00000568561 SPANXN1Q5VSR9 72 aa9.95□□□□□ -0.82
NME3-211ENST00000568561 MBD3L1Q8WWY6 194 aa9.95□□□□□ -0.82
NME3-211ENST00000568561 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
NME3-211ENST00000568561 PRR34Q9NV39 138 aa9.95□□□□□ -0.82
NME3-211ENST00000568561 PKIAP61925 76 aa9.94□□□□□ -0.82
NME3-211ENST00000568561 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
NME3-211ENST00000568561 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
NME3-211ENST00000568561 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.94□□□□□ -0.82
NME3-211ENST00000568561 FAM213BQ8TBF2 198 aa9.94□□□□□ -0.82
NME3-211ENST00000568561 VAX2Q9UIW0 290 aa9.94□□□□□ -0.82
NME3-211ENST00000568561 KIF25-AS1Q9Y6Z4 181 aa9.94□□□□□ -0.82
NME3-211ENST00000568561 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 TRAV1-1A0A0B4J248 108 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 CXCL1P09341 107 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 MT1HL1P0DM35 61 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 SDIM1Q6ZPB5 146 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 BAGE2Q86Y30 109 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 LYPD6BQ8NI32 183 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 MLST8Q9BVC4 326 aa9.93□□□□□ -0.82
NME3-211ENST00000568561 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
NME3-211ENST00000568561 MGPP08493 103 aa9.92□□□□□ -0.82
NME3-211ENST00000568561 OR5AL1P0C617 328 aa9.92□□□□□ -0.82
NME3-211ENST00000568561 CLLU1Q5K131 121 aa9.92□□□□□ -0.82
NME3-211ENST00000568561 SFT2D1Q8WV19 159 aa9.92□□□□□ -0.82
NME3-211ENST00000568561 AP1S3Q96PC3 154 aa9.92□□□□□ -0.82
NME3-211ENST00000568561 hDV102S1A0JD36 115 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 H2AFB1P0C5Y9 115 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 SMIM17P0DL12 118 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 GZMBP10144 247 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 REG3AQ06141 175 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 TMEM97Q5BJF2 176 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 TPPP3Q9BW30 176 aa9.91□□□□□ -0.82
NME3-211ENST00000568561 S100A9P06702 114 aaKnown RBP9.9□□□□□ -0.82
NME3-211ENST00000568561 RAB14P61106 215 aa9.9□□□□□ -0.82
NME3-211ENST00000568561 IQCJQ1A5X6 159 aa9.9□□□□□ -0.82
NME3-211ENST00000568561 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.82
NME3-211ENST00000568561 RNF213Q63HN8 5207 aa9.9□□□□□ -0.82
NME3-211ENST00000568561 IGHV1-24A0A0C4DH33 117 aa9.89□□□□□ -0.83
NME3-211ENST00000568561 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
NME3-211ENST00000568561 C20orf203Q8NBC4 194 aa9.89□□□□□ -0.83
NME3-211ENST00000568561 TNXBP22105 4242 aa9.88□□□□□ -0.83
NME3-211ENST00000568561 IGLV4-60A0A075B6I1 120 aa9.88□□□□□ -0.83
NME3-211ENST00000568561 TEX46H3BTG2 121 aa9.88□□□□□ -0.83
NME3-211ENST00000568561 M0QY20 66 aa9.88□□□□□ -0.83
NME3-211ENST00000568561 CNBPP62633 177 aaKnown RBP9.88□□□□□ -0.83
NME3-211ENST00000568561 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
NME3-211ENST00000568561 CLRN3Q8NCR9 226 aa9.88□□□□□ -0.83
NME3-211ENST00000568561 SLPIP03973 132 aa9.87□□□□□ -0.83
NME3-211ENST00000568561 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
NME3-211ENST00000568561 CCL20P78556 96 aa9.87□□□□□ -0.83
NME3-211ENST00000568561 LRP2P98164 4655 aa9.87□□□□□ -0.83
NME3-211ENST00000568561 NDUFA5Q16718 116 aa9.87□□□□□ -0.83
NME3-211ENST00000568561 A0A087WYN8 130 aa9.86□□□□□ -0.83
NME3-211ENST00000568561 DPH3Q96FX2 82 aa9.86□□□□□ -0.83
NME3-211ENST00000568561 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
NME3-211ENST00000568561 IGHV3-64A0A075B6Q5 118 aa9.85□□□□□ -0.83
NME3-211ENST00000568561 IGLC6P0CF74 106 aa9.85□□□□□ -0.83
NME3-211ENST00000568561 Q6ZRU5 148 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms