RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 LY6HO94772 140 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 NXPH4O95158 308 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 SFTA2Q6UW10 78 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 TRPT1Q86TN4 253 aaKnown RBP4.1□□□□□ -1.75
LINC01541-202ENST00000568095 LENEPQ9Y5L5 61 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 IGHV4OR15-8A0A075B7B6 117 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 A0A087WW49 117 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 H3BVH4 76 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 M0R2P5 195 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 TIMM23O14925 209 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 IGHV4-39P01824 125 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 ELANEP08246 267 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 HERVK_113P61574 105 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 EBI3Q14213 229 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 ATXN8Q156A1 80 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 ZNF876PQ49A33 203 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 LINC01620Q4KN68 170 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 NTN5Q8WTR8 489 aaPredicted RBP4.09□□□□□ -1.75
LINC01541-202ENST00000568095 TMEM141Q96I45 108 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 TIMM17AQ99595 171 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 VPREB3Q9UKI3 123 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 CLPSL1A2RUU4 121 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 WIPF1O43516 503 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 PPP1R17O96001 155 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 PMVKQ15126 192 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 C5orf47Q569G3 176 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 C15orf53Q8NAA6 179 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 RPL39LQ96EH5 51 aaKnown RBP4.09□□□□□ -1.75
LINC01541-202ENST00000568095 DPH3P1Q9H4G8 78 aa4.09□□□□□ -1.75
LINC01541-202ENST00000568095 MALRD1Q5VYJ5 2156 aa4.09□□□□□ -1.76
LINC01541-202ENST00000568095 TRAV8-4A0A0B4J246 113 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 ODF3BA8MYP8 253 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 LINC00315P59091 139 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 LMO4P61968 165 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 ANXA2RQ3ZCQ2 193 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 KRTAP1-3Q8IUG1 177 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 Q8N6K4 173 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 ZNRF2Q8NHG8 242 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 KIF25-AS1Q9Y6Z4 181 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 ARHGAP32A7KAX9 2087 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 DUSP14O95147 198 aaKnown RBP4.08□□□□□ -1.76
LINC01541-202ENST00000568095 DLX1P56177 255 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 PRR9Q5T870 116 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 SPANXN1Q5VSR9 72 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 APRG1Q8IVJ8 170 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 RNF182Q8N6D2 247 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 FAM19A4Q96LR4 140 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 SPANXDQ9BXN6 97 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 S4R3C0 116 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 CENPEQ02224 2701 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 USP9YO00507 2555 aaPredicted RBP4.08□□□□□ -1.76
LINC01541-202ENST00000568095 TEX49A0A1B0GTD5 131 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 LEPROTO15243 131 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 ZFP36P26651 326 aaKnown RBP4.08□□□□□ -1.76
LINC01541-202ENST00000568095 POLR2KP53803 58 aaKnown RBP4.08□□□□□ -1.76
LINC01541-202ENST00000568095 NDPQ00604 133 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 MEIG1Q5JSS6 88 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 SDIM1Q6ZPB5 146 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 KLK15Q9H2R5 256 aa4.08□□□□□ -1.76
LINC01541-202ENST00000568095 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
LINC01541-202ENST00000568095 TMEM223A0PJW6 202 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 SDHAF1A6NFY7 115 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 H3BMM0 161 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 H3BT86 120 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 J3QQQ9 107 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 C14orf178Q8N769 122 aaPredicted RBP4.07□□□□□ -1.76
LINC01541-202ENST00000568095 UBE2WQ96B02 151 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 F5H697 171 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 H7C423 109 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 M0R1W7 72 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 C10orf105Q8TEF2 133 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 LITAFQ99732 161 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 FAM208BQ5VWN6 2430 aa4.07□□□□□ -1.76
LINC01541-202ENST00000568095 GCN1Q92616 2671 aaKnown RBP4.07□□□□□ -1.76
LINC01541-202ENST00000568095 LRRK2Q5S007 2527 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 TRAV2A0A0B4J234 112 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 IGHV1-69P01742 117 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 ZFAND2AQ8N6M9 145 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 TRIAP1O43715 76 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 MUSTN1Q8IVN3 82 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 CCL19Q99731 98 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 TP53TG1Q9Y2A0 90 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 PRRC2AP48634 2157 aaKnown RBP4.06□□□□□ -1.76
LINC01541-202ENST00000568095 ZANQ9Y493 2812 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 TRBV6-5A0A0K0K1A5 114 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 TMEM170BQ5T4T1 132 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 DNAJC30Q96LL9 226 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 BPESC1Q9GZL8 116 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 PPDPFQ9H3Y8 114 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 DPM3Q9P2X0 92 aa4.06□□□□□ -1.76
LINC01541-202ENST00000568095 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
LINC01541-202ENST00000568095 SPRY2O43597 315 aa4.05□□□□□ -1.76
LINC01541-202ENST00000568095 IGHV3-23P01764 117 aa4.05□□□□□ -1.76
LINC01541-202ENST00000568095 RNASE3P12724 160 aaKnown RBP4.05□□□□□ -1.76
LINC01541-202ENST00000568095 KRTAP10-9P60411 292 aa4.05□□□□□ -1.76
LINC01541-202ENST00000568095 PRB3Q04118 309 aaPredicted RBP4.05□□□□□ -1.76
LINC01541-202ENST00000568095 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
LINC01541-202ENST00000568095 COX7A1P24310 79 aa4.05□□□□□ -1.76
LINC01541-202ENST00000568095 LINC00477Q96M19 166 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms