RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 F5H697 171 aa11.59□□□□□ -0.55
CLN6-208ENST00000567060 KCNIP4Q6PIL6 250 aa11.59□□□□□ -0.55
CLN6-208ENST00000567060 RPL36AP83881 106 aaKnown RBP11.58□□□□□ -0.56
CLN6-208ENST00000567060 Q6ZSN1 163 aa11.58□□□□□ -0.56
CLN6-208ENST00000567060 RPL36ALQ969Q0 106 aaKnown RBP11.58□□□□□ -0.56
CLN6-208ENST00000567060 BTF3L4Q96K17 158 aa11.58□□□□□ -0.56
CLN6-208ENST00000567060 DNAJC30Q96LL9 226 aa11.58□□□□□ -0.56
CLN6-208ENST00000567060 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
CLN6-208ENST00000567060 C7orf77A4D0Y5 90 aa11.57□□□□□ -0.56
CLN6-208ENST00000567060 APOC3P02656 99 aa11.57□□□□□ -0.56
CLN6-208ENST00000567060 MGPP08493 103 aa11.57□□□□□ -0.56
CLN6-208ENST00000567060 LINC00694P0DN24 101 aa11.57□□□□□ -0.56
CLN6-208ENST00000567060 HBBP68871 147 aa11.57□□□□□ -0.56
CLN6-208ENST00000567060 RASL11AQ6T310 242 aa11.57□□□□□ -0.56
CLN6-208ENST00000567060 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.57□□□□□ -0.56
CLN6-208ENST00000567060 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
CLN6-208ENST00000567060 M0QY20 66 aa11.56□□□□□ -0.56
CLN6-208ENST00000567060 S100PP25815 95 aa11.56□□□□□ -0.56
CLN6-208ENST00000567060 UBE2DNLQ8IWF7 75 aa11.56□□□□□ -0.56
CLN6-208ENST00000567060 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
CLN6-208ENST00000567060 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
CLN6-208ENST00000567060 PKD1P98161 4303 aa11.55□□□□□ -0.56
CLN6-208ENST00000567060 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
CLN6-208ENST00000567060 SUMO4Q6EEV6 95 aa11.55□□□□□ -0.56
CLN6-208ENST00000567060 ATP6V0E2Q8NHE4 81 aa11.55□□□□□ -0.56
CLN6-208ENST00000567060 MRAP2Q96G30 205 aa11.55□□□□□ -0.56
CLN6-208ENST00000567060 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
CLN6-208ENST00000567060 PPP1R17O96001 155 aa11.54□□□□□ -0.56
CLN6-208ENST00000567060 LYPD5Q6UWN5 251 aa11.54□□□□□ -0.56
CLN6-208ENST00000567060 RPS10P5Q9NQ39 176 aa11.54□□□□□ -0.56
CLN6-208ENST00000567060 MRPS16Q9Y3D3 137 aaKnown RBP11.54□□□□□ -0.56
CLN6-208ENST00000567060 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 GAGE1Q13065 139 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 GAGE4Q13068 117 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 GAGE5Q13069 117 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 ESRGQ1W209 222 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 TMEM97Q5BJF2 176 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
CLN6-208ENST00000567060 SLC7A5P1Q8MH63 180 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 NEXN-AS1Q8NBZ9 246 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 ZNRF2Q8NHG8 242 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 GTSF1LQ9H1H1 148 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 NIT2Q9NQR4 276 aa11.53□□□□□ -0.56
CLN6-208ENST00000567060 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
CLN6-208ENST00000567060 CAMPP49913 170 aa11.52□□□□□ -0.57
CLN6-208ENST00000567060 UBE2D3P61077 147 aa11.52□□□□□ -0.57
CLN6-208ENST00000567060 UBE2D2P62837 147 aa11.52□□□□□ -0.57
CLN6-208ENST00000567060 COX19Q49B96 90 aa11.52□□□□□ -0.57
CLN6-208ENST00000567060 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
CLN6-208ENST00000567060 MRPL54Q6P161 138 aaKnown RBP11.52□□□□□ -0.57
CLN6-208ENST00000567060 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.57
CLN6-208ENST00000567060 TNFRSF18Q9Y5U5 241 aa11.52□□□□□ -0.57
CLN6-208ENST00000567060 RAB4AP20338 218 aa11.51□□□□□ -0.57
CLN6-208ENST00000567060 K7EP13 123 aa11.5□□□□□ -0.57
CLN6-208ENST00000567060 LELP1Q5T871 98 aa11.5□□□□□ -0.57
CLN6-208ENST00000567060 RNF185Q96GF1 192 aa11.5□□□□□ -0.57
CLN6-208ENST00000567060 TRBV6-5A0A0K0K1A5 114 aa11.49□□□□□ -0.57
CLN6-208ENST00000567060 PPBPP02775 128 aa11.49□□□□□ -0.57
CLN6-208ENST00000567060 AMN1Q8IY45 258 aa11.49□□□□□ -0.57
CLN6-208ENST00000567060 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
CLN6-208ENST00000567060 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
CLN6-208ENST00000567060 Q9UF83 564 aa11.47□□□□□ -0.57
CLN6-208ENST00000567060 PHOX2AO14813 284 aa11.46□□□□□ -0.57
CLN6-208ENST00000567060 PKIAP61925 76 aa11.46□□□□□ -0.57
CLN6-208ENST00000567060 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.57
CLN6-208ENST00000567060 Q9H8V8 135 aa11.46□□□□□ -0.57
CLN6-208ENST00000567060 HSPG2P98160 4391 aa11.46□□□□□ -0.58
CLN6-208ENST00000567060 TRAV26-2A0A0B4J265 109 aa11.45□□□□□ -0.58
CLN6-208ENST00000567060 SIVA1O15304 175 aa11.45□□□□□ -0.58
CLN6-208ENST00000567060 HLA-DQA1P01909 254 aa11.45□□□□□ -0.58
CLN6-208ENST00000567060 MT-ND6P03923 174 aa11.45□□□□□ -0.58
CLN6-208ENST00000567060 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
CLN6-208ENST00000567060 MRPL51Q4U2R6 128 aaKnown RBP11.45□□□□□ -0.58
CLN6-208ENST00000567060 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
CLN6-208ENST00000567060 LAMTOR2Q9Y2Q5 125 aa11.45□□□□□ -0.58
CLN6-208ENST00000567060 URGCP-MRPS24S4R325 110 aa11.45□□□□□ -0.58
CLN6-208ENST00000567060 TRBV24-1A0A075B6N3 115 aa11.44□□□□□ -0.58
CLN6-208ENST00000567060 NCR2O95944 276 aa11.44□□□□□ -0.58
CLN6-208ENST00000567060 CKS2P33552 79 aa11.44□□□□□ -0.58
CLN6-208ENST00000567060 C20orf78Q9BR46 151 aa11.44□□□□□ -0.58
CLN6-208ENST00000567060 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
CLN6-208ENST00000567060 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
CLN6-208ENST00000567060 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
CLN6-208ENST00000567060 TRBV6-8A0A0A6YYG3 113 aa11.43□□□□□ -0.58
CLN6-208ENST00000567060 DNAH10OSP0CZ25 163 aa11.43□□□□□ -0.58
CLN6-208ENST00000567060 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
CLN6-208ENST00000567060 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
CLN6-208ENST00000567060 CHCHD7Q9BUK0 85 aa11.43□□□□□ -0.58
CLN6-208ENST00000567060 KRTAP4-5Q9BYR2 181 aa11.43□□□□□ -0.58
CLN6-208ENST00000567060 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
CLN6-208ENST00000567060 SDHAF1A6NFY7 115 aa11.42□□□□□ -0.58
CLN6-208ENST00000567060 ELOBQ15370 118 aa11.42□□□□□ -0.58
CLN6-208ENST00000567060 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
CLN6-208ENST00000567060 C10orf126Q8N4M7 172 aa11.42□□□□□ -0.58
CLN6-208ENST00000567060 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
CLN6-208ENST00000567060 SMCO4Q9NRQ5 59 aa11.42□□□□□ -0.58
CLN6-208ENST00000567060 TRBV25-1A0A075B6N4 114 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 TRBV27A0A0K0K1C4 114 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 I3L3M4 83 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms