RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PPP1R2P9O14990 202 aa8.41□□□□□ -1.06
RNF40-208ENST00000565995 RHEBQ15382 184 aa8.41□□□□□ -1.06
RNF40-208ENST00000565995 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
RNF40-208ENST00000565995 CLRN3Q8NCR9 226 aa8.41□□□□□ -1.06
RNF40-208ENST00000565995 Q9HAA7 133 aa8.41□□□□□ -1.06
RNF40-208ENST00000565995 RPS10P5Q9NQ39 176 aa8.41□□□□□ -1.06
RNF40-208ENST00000565995 C11orf21Q9P2W6 132 aa8.41□□□□□ -1.06
RNF40-208ENST00000565995 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
RNF40-208ENST00000565995 CIDEAO60543 219 aa8.4□□□□□ -1.06
RNF40-208ENST00000565995 S100A1P23297 94 aa8.4□□□□□ -1.06
RNF40-208ENST00000565995 S100A4P26447 101 aaKnown RBP8.4□□□□□ -1.06
RNF40-208ENST00000565995 ASIPP42127 132 aa8.4□□□□□ -1.06
RNF40-208ENST00000565995 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
RNF40-208ENST00000565995 LELP1Q5T871 98 aa8.4□□□□□ -1.06
RNF40-208ENST00000565995 SCXQ7RTU7 201 aa8.4□□□□□ -1.06
RNF40-208ENST00000565995 TPPP3Q9BW30 176 aa8.4□□□□□ -1.06
RNF40-208ENST00000565995 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 IGHV3-16A0A0C4DH30 117 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 C7orf77A4D0Y5 90 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 TYMSP04818 313 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 GZMBP10144 247 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 OR10J3Q5JRS4 329 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 CHAC1Q9BUX1 264 aa8.39□□□□□ -1.07
RNF40-208ENST00000565995 TRAV8-3A0A0A6YYJ7 113 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 A8MWL6 223 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 H3BVH4 76 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 GNRH2O43555 120 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 CT83Q5H943 113 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 CTDSP1Q9GZU7 261 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 V9GYV3 84 aa8.38□□□□□ -1.07
RNF40-208ENST00000565995 BORCS7Q96B45 105 aa8.37□□□□□ -1.07
RNF40-208ENST00000565995 COX11Q9Y6N1 276 aa8.37□□□□□ -1.07
RNF40-208ENST00000565995 RS1O15537 224 aa8.36□□□□□ -1.07
RNF40-208ENST00000565995 KCNIP4Q6PIL6 250 aa8.36□□□□□ -1.07
RNF40-208ENST00000565995 FER1L6-AS1Q8NA97 138 aa8.36□□□□□ -1.07
RNF40-208ENST00000565995 CIRBP-AS1Q8TBR5 109 aa8.36□□□□□ -1.07
RNF40-208ENST00000565995 TSKUQ8WUA8 353 aa8.36□□□□□ -1.07
RNF40-208ENST00000565995 PRADC1Q9BSG0 188 aa8.36□□□□□ -1.07
RNF40-208ENST00000565995 IL36BQ9NZH7 164 aa8.36□□□□□ -1.07
RNF40-208ENST00000565995 A0A087WWC5 75 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 CXCL1P09341 107 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 ARMS2P0C7Q2 107 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 S100PP25815 95 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 SSTP61278 116 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 RHOHQ15669 191 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 CFAP126Q5VTH2 177 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 ATRAIDQ6UW56 229 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 Q8N976 141 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 PTH2Q96A98 100 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 NAT8BQ9UHF3 227 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 PHLDA3Q9Y5J5 127 aa8.35□□□□□ -1.07
RNF40-208ENST00000565995 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.34□□□□□ -1.07
RNF40-208ENST00000565995 MUC21A0A0G2JKD1 596 aa8.34□□□□□ -1.07
RNF40-208ENST00000565995 MUC21A0A140T8X8 626 aa8.34□□□□□ -1.07
RNF40-208ENST00000565995 HIGD1CA8MV81 97 aa8.34□□□□□ -1.07
RNF40-208ENST00000565995 GFRA4Q9GZZ7 299 aa8.34□□□□□ -1.07
RNF40-208ENST00000565995 URGCP-MRPS24S4R325 110 aa8.34□□□□□ -1.07
RNF40-208ENST00000565995 M0R381 172 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 LECT2O14960 151 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 IGLC6P0CF74 106 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 LINC00694P0DN24 101 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 ZNF876PQ49A33 203 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 LINC01620Q4KN68 170 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 SPANXN1Q5VSR9 72 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 LYZL1Q6UWQ5 148 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 Q8N3U1 123 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 GTSF1Q8WW33 167 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
RNF40-208ENST00000565995 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 FAM231BA6NCW3 169 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 F2Z2F3 143 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 RNASE3P12724 160 aaKnown RBP8.32□□□□□ -1.08
RNF40-208ENST00000565995 CTRLP40313 264 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 DAZ4Q86SG3 579 aaKnown RBP8.32□□□□□ -1.08
RNF40-208ENST00000565995 CBLN2Q8IUK8 224 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 OR10AG1Q8NH19 301 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 DAZ3Q9NR90 486 aaKnown RBP8.32□□□□□ -1.08
RNF40-208ENST00000565995 TMEM242Q9NWH2 141 aa8.32□□□□□ -1.08
RNF40-208ENST00000565995 SNAI2O43623 268 aa8.31□□□□□ -1.08
RNF40-208ENST00000565995 OR5AL1P0C617 328 aa8.31□□□□□ -1.08
RNF40-208ENST00000565995 CACNG7P62955 275 aa8.31□□□□□ -1.08
RNF40-208ENST00000565995 MRPL54Q6P161 138 aaKnown RBP8.31□□□□□ -1.08
RNF40-208ENST00000565995 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
RNF40-208ENST00000565995 IMMP2LQ96T52 175 aa8.31□□□□□ -1.08
RNF40-208ENST00000565995 SMCO4Q9NRQ5 59 aa8.31□□□□□ -1.08
RNF40-208ENST00000565995 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
RNF40-208ENST00000565995 SCO1O75880 301 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms