RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 KMT2CQ8NEZ4 4911 aaKnown RBP2.22□□□□□ -2.05
CHD9-216ENST00000565803 IGKV1-6A0A0C4DH72 117 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 A0A0G2JND7 137 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 H3BVH4 76 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 PPP1R3DO95685 299 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 RPL28P46779 137 aaKnown RBP2.22□□□□□ -2.05
CHD9-216ENST00000565803 FGF12P61328 243 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 HIST1H4AP62805 103 aaKnown RBP2.22□□□□□ -2.05
CHD9-216ENST00000565803 FOXF1Q12946 379 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 MRPL51Q4U2R6 128 aaKnown RBP2.22□□□□□ -2.05
CHD9-216ENST00000565803 CYP2G1PQ6ZSU1 146 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 LINC00476Q8WZB0 136 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 ZNF414Q96IQ9 312 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 LINC00597Q9H2U6 94 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 HEATR5BQ9P2D3 2071 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 MEGF8Q7Z7M0 2845 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 PTHLHP12272 177 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 SPINT3P49223 89 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 FHL1Q13642 323 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.22□□□□□ -2.05
CHD9-216ENST00000565803 LMO3Q8TAP4 145 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 DIRC1Q969H9 104 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 ICOSQ9Y6W8 199 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 DSCAML1Q8TD84 2053 aa2.22□□□□□ -2.05
CHD9-216ENST00000565803 MUC4Q99102 2169 aa2.21□□□□□ -2.05
CHD9-216ENST00000565803 ESPL1Q14674 2120 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 A0A1W2PQD3 144 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 HMSDA8MTL9 139 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 IGKV1D-33P01593 117 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 IGKV1-33P01594 117 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 IGHV3-11P01762 117 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 NPPCP23582 126 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 SMIM11AP58511 58 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 EBI3Q14213 229 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 KPRPQ5T749 579 aaPredicted RBP2.21□□□□□ -2.06
CHD9-216ENST00000565803 FAM53AQ6NSI3 398 aaPredicted RBP2.21□□□□□ -2.06
CHD9-216ENST00000565803 NOTCH2NLQ7Z3S9 236 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 CEND1Q8N111 149 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 RPRMLQ8N4K4 120 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 LY96Q9Y6Y9 160 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 NIPBLQ6KC79 2804 aaeCLIP2.21□□□□□ -2.061e-5■□□□□ 11.1
CHD9-216ENST00000565803 ZNF469Q96JG9 3925 aaPredicted RBP2.21□□□□□ -2.06
CHD9-216ENST00000565803 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 LY6HO94772 140 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 PROK1P58294 105 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 CCL8P80075 99 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 ELOBQ15370 118 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 ZNF56Q15929 161 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 ZNF627Q7L945 461 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 FAM103A1Q9BTL3 118 aaKnown RBP2.21□□□□□ -2.06
CHD9-216ENST00000565803 NBEAL1Q6ZS30 2694 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 PRKDCP78527 4128 aaKnown RBP2.21□□□□□ -2.06
CHD9-216ENST00000565803 TET2Q6N021 2002 aaPredicted RBP2.21□□□□□ -2.06
CHD9-216ENST00000565803 ATP5EP56381 51 aaPredicted RBP2.21□□□□□ -2.06
CHD9-216ENST00000565803 DEFB113Q30KQ7 82 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 FLVCR1-AS1Q8TAF5 88 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 FGF22Q9HCT0 170 aa2.21□□□□□ -2.06
CHD9-216ENST00000565803 CSPG4Q6UVK1 2322 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 C17orf112F2Z3M2 114 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 K7EM74 188 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 SOCS2O14508 198 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 KRTAP24-1Q3LI83 254 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 CASC2Q6XLA1 102 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 C5orf38Q86SI9 138 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 LINC00588Q9Y4M8 146 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 RTTNQ86VV8 2226 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 CCDC168Q8NDH2 2452 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 UNC13CQ8NB66 2214 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 IGHV3-73A0A0B4J1V6 119 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 GNRH2O43555 120 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 NPYP01303 97 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 CFC1BP0CG36 223 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 RNASE4P34096 147 aaKnown RBP2.2□□□□□ -2.06
CHD9-216ENST00000565803 ESRGQ1W209 222 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 Q6ZQT7 251 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 PHF5AQ7RTV0 110 aaKnown RBP2.2□□□□□ -2.06
CHD9-216ENST00000565803 LINC00479Q96M42 142 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 AMELYQ99218 206 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 CXCL16Q9H2A7 254 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 HILPDAQ9Y5L2 63 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 U3KQK5 164 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 KNL1Q8NG31 2342 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 HEATR5AQ86XA9 2040 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 NSD1Q96L73 2696 aaPredicted RBP2.2□□□□□ -2.06
CHD9-216ENST00000565803 MYOFQ9NZM1 2061 aa2.2□□□□□ -2.06
CHD9-216ENST00000565803 ADCYAP1P18509 176 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 GNB2P62879 340 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 NMSQ5H8A3 153 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 C12orf73Q69YU5 71 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 Q6P435 159 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 CLECL1Q8IZS7 167 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 ZNF525Q8N782 197 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 ZNF524Q96C55 264 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 TMSB15BA0A087X1C1 80 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 C17orf51A8MQB3 221 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 FSHBP01225 129 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 C1QAP02745 245 aa2.19□□□□□ -2.06
CHD9-216ENST00000565803 PATE4P0C8F1 98 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms