RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 HIGD2AQ9BW72 106 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 ASH1LQ9NR48 2969 aaKnown RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM106BQ9NUM4 274 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 SPTA1P02549 2419 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 NAV2Q8IVL1 2488 aa2.21□□□□□ -2.06
LINC00560-201ENST00000564593 FLNBO75369 2602 aaKnown RBP2.21□□□□□ -2.06
LINC00560-201ENST00000564593 FASNP49327 2511 aaKnown RBP2.2□□□□□ -2.06
LINC00560-201ENST00000564593 IGLV10-54A0A075B6I4 117 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 IGHV1-69-2A0A0G2JMI3 117 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 TEX50A0A1B0GTY4 177 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 A0A1B0GU33 70 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 SPAARA0A1B0GVQ0 90 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 SMIM27A0A1W2PRY6 76 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 OOSP1A8MZH6 123 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 E7EQL1 145 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 RPL27AP46776 148 aaKnown RBP2.2□□□□□ -2.06
LINC00560-201ENST00000564593 CSN1S1P47710 185 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 HBBP68871 147 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 PDE6HQ13956 83 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM155Q4W5P6 130 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 COL5A1-AS1Q5SY13 56 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 C1orf195Q5TG92 126 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 ARFGEF3Q5TH69 2177 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 LRP11Q86VZ4 500 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM86BQ8N661 226 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 FAM216BQ8N7L0 139 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 Q8NAQ8 132 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 OR8B3Q8NGG8 313 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 TSKUQ8WUA8 353 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 CHCHD1Q96BP2 118 aaKnown RBP2.2□□□□□ -2.06
LINC00560-201ENST00000564593 OR8B2Q96RD0 313 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 PCNX1Q96RV3 2341 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 CCL13Q99616 98 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM133Q9H2Q1 129 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 OTORQ9NRC9 128 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 NDUFA4L2Q9NRX3 87 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM14CQ9P0S9 112 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 UQCR10Q9UDW1 63 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 HSPB8Q9UJY1 196 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 HIGD1AQ9Y241 93 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 PHLDA3Q9Y5J5 127 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 FAM215AQ9Y5M1 114 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 XIRP2A4UGR9 3374 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 PTPRZ1P23471 2315 aaPredicted RBP2.2□□□□□ -2.06
LINC00560-201ENST00000564593 EPG5Q9HCE0 2579 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 PKDREJQ9NTG1 2253 aa2.2□□□□□ -2.06
LINC00560-201ENST00000564593 TRBV6-1A0A0K0K1D8 114 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 SH2D1AO60880 128 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 SLC25A5P05141 298 aaKnown RBP2.19□□□□□ -2.06
LINC00560-201ENST00000564593 DEFA4P12838 97 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 CBLN1P23435 193 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 CRYBB3P26998 211 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 RPS20P60866 119 aaKnown RBP2.19□□□□□ -2.06
LINC00560-201ENST00000564593 CCL8P80075 99 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 PSG9Q00887 426 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 BSPH1Q075Z2 132 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 MIR17HGQ75NE6 70 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 TCF23Q7RTU1 214 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 LINC00305Q7Z4B0 112 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 BPIFA4PQ86YQ2 179 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 OR8I2Q8N0Y5 310 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 C1orf158Q8N1D5 194 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 DEFB108BQ8NET1 73 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 RNASE6Q93091 150 aaKnown RBP2.19□□□□□ -2.06
LINC00560-201ENST00000564593 C14orf144Q96I85 54 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 HSPB9Q9BQS6 159 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 MIEN1Q9BRT3 115 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 DERL1Q9BUN8 251 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM191AQ9H0A3 160 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 SMPXQ9UHP9 88 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 ZFP30Q9Y2G7 519 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 V9GYV3 84 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 RIF1Q5UIP0 2472 aaKnown RBP2.19□□□□□ -2.06
LINC00560-201ENST00000564593 MUC6Q6W4X9 2439 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 TRBV20OR9-2A0A075B6H5 130 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 HIGD1CA8MV81 97 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 M0R1W7 72 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 M0R2Z0 102 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 CNIH1O95406 144 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 IGKV1-16P04430 117 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 NBEAP1P0C6P0 100 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 LINC00614P0C842 121 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 RPL7P18124 248 aaKnown RBP2.19□□□□□ -2.06
LINC00560-201ENST00000564593 SRIP30626 198 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 KRTDAPP60985 99 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 SPATA31B1PQ5VZV4 182 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 ZNF705AQ6ZN79 300 aaPredicted RBP2.19□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM75Q8N9X5 138 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 OR2D3Q8NGH3 330 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 LEAP2Q969E1 77 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 PMCHL2Q9BQD1 86 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM70Q9BUB7 260 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 PRO1933Q9H354 126 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 ST20Q9HBF5 79 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 EPDR1Q9UM22 224 aa2.19□□□□□ -2.06
LINC00560-201ENST00000564593 PIEZO2Q9H5I5 2752 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 PRUNE2Q8WUY3 3088 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 ZNF292O60281 2723 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 APC2O95996 2303 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 TRAV3A0A0B4J244 114 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms