RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ASB16-AS1Q495Z4 193 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 LCE1CQ5T751 118 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 LCE1BQ5T7P3 118 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 MIC13Q5XKP0 118 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 OR2T2Q6IF00 324 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 FP248Q71RG6 208 aaPredicted RBP1.08□□□□□ -2.24
CHD9-209ENST00000564255 REG4Q9BYZ8 158 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 NPVFQ9HCQ7 196 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 BET1LQ9NYM9 111 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 TAS2R4Q9NYW5 299 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 LHFPL6Q9Y693 200 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 HELZP42694 1942 aaKnown RBP1.08□□□□□ -2.24
CHD9-209ENST00000564255 A6NN06 94 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 SDCBPO00560 298 aaPredicted RBP1.07□□□□□ -2.24
CHD9-209ENST00000564255 SHBGP04278 402 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 SLC25A4P12235 298 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 TPT1P13693 172 aaKnown RBP1.07□□□□□ -2.24
CHD9-209ENST00000564255 PCBD1P61457 104 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 ZNF345Q14585 488 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 PEA15Q15121 130 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 LINC00299Q6ZSB3 139 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 OR8B3Q8NGG8 313 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 ATP6V0E2Q8NHE4 81 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 PSMF1Q92530 271 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 MYO5AQ9Y4I1 1855 aaKnown RBP1.07□□□□□ -2.24
CHD9-209ENST00000564255 PLXNB1O43157 2135 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 H3BQ15 152 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 BLCAPP62952 87 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 CIRBPQ14011 172 aaKnown RBP1.07□□□□□ -2.24
CHD9-209ENST00000564255 KHDC3LQ587J8 217 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 ZNF720Q7Z2F6 126 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 C10orf82Q8WW14 230 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 CLEC2BQ92478 149 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 POP5Q969H6 163 aaKnown RBP1.07□□□□□ -2.24
CHD9-209ENST00000564255 LINC00467Q9BRT7 94 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 MCM3APO60318 1980 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 CITO14578 2027 aa1.07□□□□□ -2.24
CHD9-209ENST00000564255 FAM24AA6NFZ4 105 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 K7EP34 96 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 SSSCA1O60232 199 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 TIMM17BO60830 172 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 NDUFB6O95139 128 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 NNATQ16517 81 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 Q5BKY6 102 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 ATP11AUNQ6ZP68 121 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 ZNF826PQ6ZT77 177 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 AQP3Q92482 292 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 DSCR8Q96T75 97 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 POLEQ07864 2286 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 LRRC37AA6NMS7 1700 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 DOCK1Q14185 1865 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 MYLKQ15746 1914 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 RBAKDNA6NC62 111 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 F8W1H4 67 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 NMBP08949 121 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 ZNF705BP0CI00 300 aaPredicted RBP1.06□□□□□ -2.24
CHD9-209ENST00000564255 COX7CP15954 63 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 C12orf73Q69YU5 71 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 UNQ5815/PRO19632Q6UWF5 114 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 Q6ZQT0 140 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 Q6ZRN7 208 aaPredicted RBP1.06□□□□□ -2.24
CHD9-209ENST00000564255 SBSPONQ8IVN8 264 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 OR2T35Q8NGX2 323 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 C10orf105Q8TEF2 133 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 CHCHD1Q96BP2 118 aaKnown RBP1.06□□□□□ -2.24
CHD9-209ENST00000564255 HYLS1Q96M11 299 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 S100A13Q99584 98 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 RETNLBQ9BQ08 111 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 NHP2Q9NX24 153 aaKnown RBP1.06□□□□□ -2.24
CHD9-209ENST00000564255 PLXNA4Q9HCM2 1894 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 SNCGO76070 127 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 PROSCO94903 275 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 CKS2P33552 79 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 SNCAP37840 140 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 ASIPP42127 132 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 ATP5EP56381 51 aaPredicted RBP1.06□□□□□ -2.24
CHD9-209ENST00000564255 KRTAP12-1P59990 96 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 DPPA3Q6W0C5 159 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 VSTM2AQ8TAG5 236 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 NABP2Q9BQ15 211 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 DPH3P1Q9H4G8 78 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 TMEM242Q9NWH2 141 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 TPRKBQ9Y3C4 175 aa1.06□□□□□ -2.24
CHD9-209ENST00000564255 NCOR1O75376 2440 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 TANC2Q9HCD6 1990 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 COL11A1P12107 1806 aaPredicted RBP1.05□□□□□ -2.24
CHD9-209ENST00000564255 UBE2L5PA0A1B0GUS4 154 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 IGLC7A0M8Q6 106 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 ZNF736B4DX44 427 aaPredicted RBP1.05□□□□□ -2.24
CHD9-209ENST00000564255 UBL3O95164 117 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 IGLV1-51P01701 117 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 APOC3P02656 99 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 GYPAP02724 150 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 SLC25A6P12236 298 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 KRTAP12-3P60328 96 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 UBE2L3P68036 154 aaKnown RBP1.05□□□□□ -2.24
CHD9-209ENST00000564255 TDRG1Q3Y452 100 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 ALKAL2Q6UX46 152 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 LY96Q9Y6Y9 160 aa1.05□□□□□ -2.24
CHD9-209ENST00000564255 CEP290O15078 2479 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms