RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 OR10J3Q5JRS4 329 aa7.21□□□□□ -1.26
SMG1-208ENST00000563448 HIST3H2BBQ8N257 126 aa7.21□□□□□ -1.26
SMG1-208ENST00000563448 OR10D4PQ8NGN7 298 aa7.21□□□□□ -1.26
SMG1-208ENST00000563448 IFITM10A6NMD0 228 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 SPART-AS1P0CW21 52 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 C11orf68Q9H3H3 251 aaKnown RBP7.2□□□□□ -1.26
SMG1-208ENST00000563448 LAMTOR2Q9Y2Q5 125 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 LINC00310P59036 64 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 URB1-AS1Q96HZ7 61 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 B9D2Q9BPU9 175 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 EDA2RQ9HAV5 297 aa7.2□□□□□ -1.26
SMG1-208ENST00000563448 A0A0J9YWU9 116 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 LOC389332A0A1B0GUA5 103 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 CIDEAO60543 219 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 P0DMU3 169 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 FAM231AP0DMU4 169 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 FAM231CP0DMU5 169 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 DAD1P61803 113 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 FHL2Q14192 279 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 JOSD1Q15040 202 aaPredicted RBP7.19□□□□□ -1.26
SMG1-208ENST00000563448 ZMAT4Q9H898 229 aa7.19□□□□□ -1.26
SMG1-208ENST00000563448 HUWE1Q7Z6Z7 4374 aaKnown RBP7.19□□□□□ -1.26
SMG1-208ENST00000563448 PRSS47A8MTI9 375 aa7.18□□□□□ -1.26
SMG1-208ENST00000563448 NUPR1O60356 82 aa7.18□□□□□ -1.26
SMG1-208ENST00000563448 COA6Q5JTJ3 125 aaKnown RBP7.18□□□□□ -1.26
SMG1-208ENST00000563448 BAGE3Q86Y29 109 aa7.18□□□□□ -1.26
SMG1-208ENST00000563448 Q9UF83 564 aa7.18□□□□□ -1.26
SMG1-208ENST00000563448 IFI27P40305 119 aaPredicted RBP7.18□□□□□ -1.26
SMG1-208ENST00000563448 MRPL52Q86TS9 123 aaKnown RBP7.18□□□□□ -1.26
SMG1-208ENST00000563448 NIT1Q86X76 327 aa7.18□□□□□ -1.26
SMG1-208ENST00000563448 PACRGQ96M98 296 aaPredicted RBP7.18□□□□□ -1.26
SMG1-208ENST00000563448 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
SMG1-208ENST00000563448 IGLV2-18A0A075B6J9 118 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 TRBV6-5A0A0K0K1A5 114 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 TEX48A0A1B0GUV7 120 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 H7C1H1 209 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 SERF1AO75920 110 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 PPP1R17O96001 155 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 SUMO2P61956 95 aaKnown RBP7.17□□□□□ -1.26
SMG1-208ENST00000563448 C12orf74Q32Q52 190 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 NEXN-AS1Q8NBZ9 246 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 A0A1B0GV90 55 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 K7EQD1 137 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 ST20Q9HBF5 79 aa7.17□□□□□ -1.26
SMG1-208ENST00000563448 DNAH9Q9NYC9 4486 aa7.16□□□□□ -1.26
SMG1-208ENST00000563448 TRBV6-4A0A1B0GX49 114 aa7.16□□□□□ -1.26
SMG1-208ENST00000563448 FABP4P15090 132 aa7.16□□□□□ -1.26
SMG1-208ENST00000563448 POLR2KP53803 58 aaKnown RBP7.16□□□□□ -1.26
SMG1-208ENST00000563448 PRSS3P2Q8NHM4 247 aa7.16□□□□□ -1.26
SMG1-208ENST00000563448 SMIM2Q9BVW6 85 aa7.16□□□□□ -1.26
SMG1-208ENST00000563448 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 ATP5G1P05496 136 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 LINC00614P0C842 121 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 ESDP10768 282 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 RNASEKQ6P5S7 137 aaKnown RBP7.15□□□□□ -1.26
SMG1-208ENST00000563448 Q8N8P6 123 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 DNAJC30Q96LL9 226 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 HIST1H2BLQ99880 126 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 TMEM70Q9BUB7 260 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 HHLA3Q9XRX5 114 aa7.15□□□□□ -1.26
SMG1-208ENST00000563448 LOC100131303A0A0U1RQF7 123 aa7.15□□□□□ -1.27
SMG1-208ENST00000563448 LINC01546A6NGU7 62 aa7.15□□□□□ -1.27
SMG1-208ENST00000563448 TCAPO15273 167 aa7.15□□□□□ -1.27
SMG1-208ENST00000563448 CRYBA4P53673 196 aa7.15□□□□□ -1.27
SMG1-208ENST00000563448 RPL32P62910 135 aaKnown RBP7.15□□□□□ -1.27
SMG1-208ENST00000563448 PDZD11Q5EBL8 140 aa7.15□□□□□ -1.27
SMG1-208ENST00000563448 NEGR1Q7Z3B1 354 aa7.15□□□□□ -1.27
SMG1-208ENST00000563448 CHCHD1Q96BP2 118 aaKnown RBP7.15□□□□□ -1.27
SMG1-208ENST00000563448 NXT2Q9NPJ8 142 aaKnown RBP7.15□□□□□ -1.27
SMG1-208ENST00000563448 TNFRSF18Q9Y5U5 241 aa7.15□□□□□ -1.27
SMG1-208ENST00000563448 TRBV10-1A0A0K0K1A3 114 aa7.14□□□□□ -1.27
SMG1-208ENST00000563448 PMCHP20382 165 aa7.14□□□□□ -1.27
SMG1-208ENST00000563448 NANOS2P60321 138 aaKnown RBP7.14□□□□□ -1.27
SMG1-208ENST00000563448 RHOHQ15669 191 aa7.14□□□□□ -1.27
SMG1-208ENST00000563448 FA2HQ7L5A8 372 aa7.14□□□□□ -1.27
SMG1-208ENST00000563448 ZNRF2Q8NHG8 242 aa7.14□□□□□ -1.27
SMG1-208ENST00000563448 C11orf45Q8TAV5 145 aa7.14□□□□□ -1.27
SMG1-208ENST00000563448 Q6ZTC4 211 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 TRBV7-3A0A075B6L6 115 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 TRBV27A0A0K0K1C4 114 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 GAGE12JA6NER3 117 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 F5H768 121 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 VCYO14598 125 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 NHLRC4P0CG21 123 aaPredicted RBP7.13□□□□□ -1.27
SMG1-208ENST00000563448 HTN3P15516 51 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 GAGE1Q13065 139 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 GAGE4Q13068 117 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 GAGE5Q13069 117 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 PMCHL1Q16048 86 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 FAM19A2Q8N3H0 131 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 DEFB104AQ8WTQ1 72 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 TMEM18Q96B42 140 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 PRADC1Q9BSG0 188 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 AP5S1Q9NUS5 200 aa7.13□□□□□ -1.27
SMG1-208ENST00000563448 PRO0255Q9UI72 69 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms