RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FABP2P12104 132 aa6.9□□□□□ -1.31
LINC00838-201ENST00000562956 LINC00315P59091 139 aa6.9□□□□□ -1.31
LINC00838-201ENST00000562956 HSD52Q0P140 79 aa6.9□□□□□ -1.31
LINC00838-201ENST00000562956 LINC01545Q5VT33 79 aa6.9□□□□□ -1.31
LINC00838-201ENST00000562956 RASL10AQ92737 203 aa6.9□□□□□ -1.31
LINC00838-201ENST00000562956 FLNBO75369 2602 aaKnown RBP6.89□□□□□ -1.31
LINC00838-201ENST00000562956 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 A0A087WWL8 130 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 SH2D6Q7Z4S9 175 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 ZNF747Q9BV97 191 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
LINC00838-201ENST00000562956 MUC4Q99102 2169 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 FGF6P10767 208 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 SAMD5Q5TGI4 173 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 POM121L12Q8N7R1 296 aa6.89□□□□□ -1.31
LINC00838-201ENST00000562956 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
LINC00838-201ENST00000562956 C2CD3Q4AC94 2353 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 TRGV11A0A075B6L2 103 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 A0A1B0GV72 72 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 HBDP02042 147 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 WFDC2Q14508 124 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 STHQ8IWL8 128 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 Q8N8P6 123 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 PF4P02776 101 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 SMIM17P0DL12 118 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 CKS1BP61024 79 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 C18orf15Q96N68 181 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 WFDC10AQ9H1F0 79 aa6.88□□□□□ -1.31
LINC00838-201ENST00000562956 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
LINC00838-201ENST00000562956 LINC00482Q8N8I6 264 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 XCL2Q9UBD3 114 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 INSP01308 110 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 FXYD2P54710 66 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 ETDBQ3ZM63 59 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 ZNF876PQ49A33 203 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 FAM74A4Q5TZK3 123 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.87□□□□□ -1.31
LINC00838-201ENST00000562956 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 LINC01587Q99440 93 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 INSL3P51460 131 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 SUMO2P61956 95 aaKnown RBP6.87□□□□□ -1.31
LINC00838-201ENST00000562956 BEAN1Q3B7T3 259 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 C19orf73Q9NVV2 129 aa6.87□□□□□ -1.31
LINC00838-201ENST00000562956 NHP2Q9NX24 153 aaKnown RBP6.87□□□□□ -1.31
LINC00838-201ENST00000562956 CRYGDP07320 174 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 FCER1GP30273 86 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 CRYBA4P53673 196 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 SPATA3Q8NHX4 192 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 SMIM2Q9BVW6 85 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 TMEM158Q8WZ71 300 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 DKK2Q9UBU2 259 aa6.86□□□□□ -1.31
LINC00838-201ENST00000562956 TENM1Q9UKZ4 2725 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 F5H697 171 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 H3BMG7 143 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 SMIM13P0DJ93 91 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 LAGE3Q14657 143 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 C1orf158Q8N1D5 194 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 C11orf72Q8NBR9 251 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 LINC00467Q9BRT7 94 aa6.85□□□□□ -1.31
LINC00838-201ENST00000562956 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
LINC00838-201ENST00000562956 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
LINC00838-201ENST00000562956 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
LINC00838-201ENST00000562956 VWFP04275 2813 aa6.84□□□□□ -1.31
LINC00838-201ENST00000562956 IGHV3OR16-12A0A075B7B8 117 aa6.84□□□□□ -1.31
LINC00838-201ENST00000562956 GIG44P09565 113 aaPredicted RBP6.84□□□□□ -1.31
LINC00838-201ENST00000562956 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
LINC00838-201ENST00000562956 IGKV2D-26A0A0A0MRZ7 120 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 PPP1R17O96001 155 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 ZNF56Q15929 161 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 CITED1Q99966 193 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 TMEM238LA0A1B0GVL6 79 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 M0R2P5 195 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 RPL35AP18077 110 aaKnown RBP6.83□□□□□ -1.32
LINC00838-201ENST00000562956 M0QY20 66 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 MORN3Q6PF18 240 aaPredicted RBP6.83□□□□□ -1.32
LINC00838-201ENST00000562956 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 F8P00451 2351 aa6.83□□□□□ -1.32
LINC00838-201ENST00000562956 JMJD1CQ15652 2540 aa6.82□□□□□ -1.32
LINC00838-201ENST00000562956 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
LINC00838-201ENST00000562956 GEMIN7Q9H840 131 aaKnown RBP6.82□□□□□ -1.32
LINC00838-201ENST00000562956 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
LINC00838-201ENST00000562956 MRPL16Q9NX20 251 aaKnown RBP6.82□□□□□ -1.32
LINC00838-201ENST00000562956 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
LINC00838-201ENST00000562956 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
LINC00838-201ENST00000562956 GTSCR1Q86UQ5 136 aa6.81□□□□□ -1.32
LINC00838-201ENST00000562956 LGALS9BQ3B8N2 356 aa6.81□□□□□ -1.32
LINC00838-201ENST00000562956 LGALS9CQ6DKI2 356 aa6.81□□□□□ -1.32
LINC00838-201ENST00000562956 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 RPL32P62910 135 aaKnown RBP6.8□□□□□ -1.32
LINC00838-201ENST00000562956 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 PTH2Q96A98 100 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 TRBV6-5A0A0K0K1A5 114 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 CYSRT1A8MQ03 144 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms