RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
SPG7-206ENST00000562775 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.81
SPG7-206ENST00000562775 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 C18orf15Q96N68 181 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 LINC01546A6NGU7 62 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 AKR1D1P51857 326 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 RPL32P62910 135 aaKnown RBP10.01□□□□□ -0.81
SPG7-206ENST00000562775 Q6ZSN1 163 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
SPG7-206ENST00000562775 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
SPG7-206ENST00000562775 FAM222AQ5U5X8 452 aa10□□□□□ -0.81
SPG7-206ENST00000562775 DEFB4AO15263 64 aa9.99□□□□□ -0.81
SPG7-206ENST00000562775 DEFB130BP0DP73 79 aa9.99□□□□□ -0.81
SPG7-206ENST00000562775 DEFB130AP0DP74 79 aa9.99□□□□□ -0.81
SPG7-206ENST00000562775 OR10D4PQ8NGN7 298 aa9.99□□□□□ -0.81
SPG7-206ENST00000562775 TMEM70Q9BUB7 260 aa9.99□□□□□ -0.81
SPG7-206ENST00000562775 DKK2Q9UBU2 259 aa9.99□□□□□ -0.81
SPG7-206ENST00000562775 NBEAL1Q6ZS30 2694 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 IGHV1-24A0A0C4DH33 117 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 SDHAF1A6NFY7 115 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 K7EMI3 77 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 VCYO14598 125 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 DEFB121Q5J5C9 76 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 RETNQ9HD89 108 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 NBEAL2Q6ZNJ1 2754 aa9.98□□□□□ -0.81
SPG7-206ENST00000562775 PMCHL1Q16048 86 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 SBSPONQ8IVN8 264 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 SPART-AS1P0CW21 52 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 P0DMU3 169 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 FAM231AP0DMU4 169 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 FAM231CP0DMU5 169 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 LAGE3Q14657 143 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
SPG7-206ENST00000562775 DNAH3Q8TD57 4116 aa9.96□□□□□ -0.81
SPG7-206ENST00000562775 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
SPG7-206ENST00000562775 TRBV10-1A0A0K0K1A3 114 aa9.96□□□□□ -0.82
SPG7-206ENST00000562775 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
SPG7-206ENST00000562775 K7EQD1 137 aa9.96□□□□□ -0.82
SPG7-206ENST00000562775 TCAPO15273 167 aa9.96□□□□□ -0.82
SPG7-206ENST00000562775 FHL2Q14192 279 aa9.96□□□□□ -0.82
SPG7-206ENST00000562775 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
SPG7-206ENST00000562775 A0A096LNJ9 63 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 TEX48A0A1B0GUV7 120 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 HBDP02042 147 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 FCER1GP30273 86 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 DAD1P61803 113 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 ORMDL2Q53FV1 153 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 Q9UF83 564 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 CELA1Q9UNI1 258 aa9.95□□□□□ -0.82
SPG7-206ENST00000562775 LEPROTL1O95214 131 aa9.94□□□□□ -0.82
SPG7-206ENST00000562775 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
SPG7-206ENST00000562775 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
SPG7-206ENST00000562775 C11orf68Q9H3H3 251 aaKnown RBP9.94□□□□□ -0.82
SPG7-206ENST00000562775 I3L3M4 83 aa9.93□□□□□ -0.82
SPG7-206ENST00000562775 RPL36AP83881 106 aaKnown RBP9.93□□□□□ -0.82
SPG7-206ENST00000562775 RPL36ALQ969Q0 106 aaKnown RBP9.93□□□□□ -0.82
SPG7-206ENST00000562775 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
SPG7-206ENST00000562775 RHOHQ15669 191 aa9.92□□□□□ -0.82
SPG7-206ENST00000562775 HSPB8Q9UJY1 196 aa9.92□□□□□ -0.82
SPG7-206ENST00000562775 NUDT3O95989 172 aa9.92□□□□□ -0.82
SPG7-206ENST00000562775 ZNRF2Q8NHG8 242 aa9.92□□□□□ -0.82
SPG7-206ENST00000562775 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
SPG7-206ENST00000562775 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
SPG7-206ENST00000562775 ATP5G1P05496 136 aa9.91□□□□□ -0.82
SPG7-206ENST00000562775 BTF3P20290 206 aaKnown RBP9.91□□□□□ -0.82
SPG7-206ENST00000562775 G0S2P27469 103 aa9.91□□□□□ -0.82
SPG7-206ENST00000562775 PRADC1Q9BSG0 188 aa9.91□□□□□ -0.82
SPG7-206ENST00000562775 TSHBP01222 138 aa9.9□□□□□ -0.82
SPG7-206ENST00000562775 C3orf79P0CE67 100 aa9.9□□□□□ -0.82
SPG7-206ENST00000562775 KRTDAPP60985 99 aa9.9□□□□□ -0.82
SPG7-206ENST00000562775 JOSD1Q15040 202 aaPredicted RBP9.9□□□□□ -0.82
SPG7-206ENST00000562775 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
SPG7-206ENST00000562775 PRO0255Q9UI72 69 aa9.9□□□□□ -0.82
SPG7-206ENST00000562775 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 CRYBA4P53673 196 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 UBE2D3P61077 147 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 UBE2D2P62837 147 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 GAGE1Q13065 139 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 GAGE4Q13068 117 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 GAGE5Q13069 117 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 PYY3Q5JQD4 70 aa9.89□□□□□ -0.83
SPG7-206ENST00000562775 A0A0J9YWU9 116 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 LINC01549A6NIU2 74 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 SMIM6P0DI80 62 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 C12orf74Q32Q52 190 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 PHLDA1Q8WV24 401 aaPredicted RBP9.88□□□□□ -0.83
SPG7-206ENST00000562775 TOMM6Q96B49 74 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 COTL1Q14019 142 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
SPG7-206ENST00000562775 MAP1LC3CQ9BXW4 147 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms