RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 NKAPP1Q8N9T2 125 aa3.55□□□□□ -1.84
TCF4-215ENST00000562638 LINC01356Q8N9X3 169 aa3.55□□□□□ -1.84
TCF4-215ENST00000562638 ESM1Q9NQ30 184 aa3.55□□□□□ -1.84
TCF4-215ENST00000562638 SNURFQ9Y675 71 aa3.55□□□□□ -1.84
TCF4-215ENST00000562638 MED12Q93074 2177 aa3.55□□□□□ -1.84
TCF4-215ENST00000562638 FER1L5A0AVI2 2057 aa3.55□□□□□ -1.84
TCF4-215ENST00000562638 ZNF503-AS2A6NEH8 195 aa3.54□□□□□ -1.84
TCF4-215ENST00000562638 C12orf77C9JDV5 145 aa3.54□□□□□ -1.84
TCF4-215ENST00000562638 PATE4P0C8F1 98 aa3.54□□□□□ -1.84
TCF4-215ENST00000562638 C2orf66Q6UXQ4 117 aa3.54□□□□□ -1.84
TCF4-215ENST00000562638 X6R8D5 127 aa3.54□□□□□ -1.84
TCF4-215ENST00000562638 DSCAMO60469 2012 aa3.54□□□□□ -1.84
TCF4-215ENST00000562638 PRRC2AP48634 2157 aaKnown RBP3.53□□□□□ -1.84
TCF4-215ENST00000562638 ESPL1Q14674 2120 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 A0A087X002 238 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 F6UB75 175 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 H0Y9J4 135 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 IGHV1-69P01742 117 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 NNATQ16517 81 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 HCP5Q6MZN7 132 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 CCL4L1Q8NHW4 92 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 TMEM254Q8TBM7 123 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 CYP4F30PQ9H0H9 118 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 MSRB1Q9NZV6 116 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 KIF25-AS1Q9Y6Z4 181 aa3.53□□□□□ -1.84
TCF4-215ENST00000562638 USF3Q68DE3 2245 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 A8MU10 97 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 H0Y8X5 98 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 PRYO14603 147 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 IGKV3-11P04433 115 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 MP68P56378 58 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 RPL11P62913 178 aaKnown RBP3.52□□□□□ -1.85
TCF4-215ENST00000562638 C15orf32Q32M92 178 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 ASB16-AS1Q495Z4 193 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 LINC01554Q52M75 96 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 ENHOQ6UWT2 76 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 CLEC19AQ6UXS0 136 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 Q6ZS52 159 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 FAM218AQ96MZ4 157 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 C8orf49Q96NF6 230 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 RNF186Q9NXI6 227 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 KNTC1P50748 2209 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 UNC13CQ8NB66 2214 aa3.52□□□□□ -1.85
TCF4-215ENST00000562638 NACAE9PAV3 2078 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 SPAG17Q6Q759 2223 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 TRAV10A0A0B4J240 114 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 LCE6AA0A183 80 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 C5orf67F2Z3F1 127 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 H0YGG7 62 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 SUMO2P61956 95 aaKnown RBP3.51□□□□□ -1.85
TCF4-215ENST00000562638 PDE6HQ13956 83 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 C9orf129Q5T035 196 aaKnown RBP3.51□□□□□ -1.85
TCF4-215ENST00000562638 Q6ZSV7 163 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 C18orf65Q6ZTR6 163 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 ZNF625Q96I27 306 aaPredicted RBP3.51□□□□□ -1.85
TCF4-215ENST00000562638 C14orf132Q9NPU4 83 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 A0A0C4DFX4 3053 aa3.51□□□□□ -1.85
TCF4-215ENST00000562638 PCNX2A6NKB5 2137 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 IGLV3-12A0A075B6K2 115 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 C3orf84H3BNL1 204 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 PSCAO43653 123 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 PPP1R17O96001 155 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 TRGV3P03979 118 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 PIK3CD-AS1Q5SR53 167 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 ITLN2Q8WWU7 325 aaPredicted RBP3.5□□□□□ -1.85
TCF4-215ENST00000562638 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 BBC3Q96PG8 261 aaPredicted RBP3.5□□□□□ -1.85
TCF4-215ENST00000562638 NDUFA4L2Q9NRX3 87 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 NDUFA12Q9UI09 145 aa3.5□□□□□ -1.85
TCF4-215ENST00000562638 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 INTS1Q8N201 2190 aaKnown RBP3.49□□□□□ -1.85
TCF4-215ENST00000562638 IGLV3-9A0A075B6K5 115 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 IGHV1-18A0A0C4DH31 117 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 IGHV7-4-1A0A0J9YVY3 117 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 K7EQG2 157 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 PRR3P79522 188 aaKnown RBP3.49□□□□□ -1.85
TCF4-215ENST00000562638 NREPQ16612 68 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 C19orf54Q5BKX5 351 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 Q75L30 129 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 C11orf72Q8NBR9 251 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
TCF4-215ENST00000562638 MRPL36Q9P0J6 103 aaKnown RBP3.49□□□□□ -1.85
TCF4-215ENST00000562638 IGHV4OR15-8A0A075B7B6 117 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 A0A087WW49 117 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 TRBV6-8A0A0A6YYG3 113 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 TRAV12-3A0A0B4J271 114 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 IGHV3OR16-9A0A0B4J2B5 98 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 HCG22E2RYF7 251 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 H3BRN7 92 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 PSPHP1O15172 72 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 IGHV3-30-3P0DP02 117 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 SPANXN1Q5VSR9 72 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 C9orf106Q8NAJ2 232 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 WFDC9Q8NEX5 89 aa3.48□□□□□ -1.85
TCF4-215ENST00000562638 LIMD2Q9BT23 127 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms