RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 DEFB104AQ8WTQ1 72 aa10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 FAM240AA0A1B0GVK7 77 aa10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 SPRY2O43597 315 aa10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 PAPPA-AS1Q5QFB9 102 aa10.58□□□□□ -0.72
GTF3C1-203ENST00000562609 LMO4P61968 165 aa10.57□□□□□ -0.72
GTF3C1-203ENST00000562609 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
GTF3C1-203ENST00000562609 PTPN13Q12923 2485 aa10.57□□□□□ -0.72
GTF3C1-203ENST00000562609 TSHBP01222 138 aa10.57□□□□□ -0.72
GTF3C1-203ENST00000562609 SIRPDQ9H106 197 aa10.57□□□□□ -0.72
GTF3C1-203ENST00000562609 UQCRQO14949 82 aa10.57□□□□□ -0.72
GTF3C1-203ENST00000562609 M0R381 172 aa10.56□□□□□ -0.72
GTF3C1-203ENST00000562609 RNF5Q99942 180 aa10.56□□□□□ -0.72
GTF3C1-203ENST00000562609 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
GTF3C1-203ENST00000562609 IGHV3-35A0A0C4DH35 117 aa10.56□□□□□ -0.72
GTF3C1-203ENST00000562609 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
GTF3C1-203ENST00000562609 FBN2P35556 2912 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 WIPF1O43516 503 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 SAA4P35542 130 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 NPBQ8NG41 125 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 LINC00526Q96FQ7 95 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 AGPAT4-IT1Q9H0P7 198 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 ZNRF2Q8NHG8 242 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 LINC00527Q9UJ94 153 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
GTF3C1-203ENST00000562609 RNF223E7ERA6 249 aa10.54□□□□□ -0.72
GTF3C1-203ENST00000562609 H3BT86 120 aa10.54□□□□□ -0.72
GTF3C1-203ENST00000562609 MGPP08493 103 aa10.54□□□□□ -0.72
GTF3C1-203ENST00000562609 MFAP4P55083 255 aa10.54□□□□□ -0.72
GTF3C1-203ENST00000562609 METTL26Q96S19 204 aa10.54□□□□□ -0.72
GTF3C1-203ENST00000562609 A0A1B0GX51 115 aa10.54□□□□□ -0.72
GTF3C1-203ENST00000562609 FANCD2OSQ96PS1 177 aa10.54□□□□□ -0.72
GTF3C1-203ENST00000562609 BRD3OSQ6XYD6 125 aa10.53□□□□□ -0.72
GTF3C1-203ENST00000562609 OR13C6PQ8NH95 151 aa10.53□□□□□ -0.72
GTF3C1-203ENST00000562609 IMUPQ9GZP8 106 aa10.53□□□□□ -0.72
GTF3C1-203ENST00000562609 IGHV3-64A0A075B6Q5 118 aa10.53□□□□□ -0.72
GTF3C1-203ENST00000562609 F8W735 103 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-203ENST00000562609 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 IGIPA6NJ69 53 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 RPL39P62891 51 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 TMEM219Q86XT9 240 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 CLEC2BQ92478 149 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 IGHV7-81A0A0B4J1V7 117 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 UBE2E1P51965 193 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 ECSCRQ19T08 205 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 DEFB121Q5J5C9 76 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
GTF3C1-203ENST00000562609 Q8N6K4 173 aa10.51□□□□□ -0.73
GTF3C1-203ENST00000562609 Q8N9W7 124 aa10.51□□□□□ -0.73
GTF3C1-203ENST00000562609 CCL19Q99731 98 aa10.51□□□□□ -0.73
GTF3C1-203ENST00000562609 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
GTF3C1-203ENST00000562609 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
GTF3C1-203ENST00000562609 GAGE2AQ6NT46 116 aa10.51□□□□□ -0.73
GTF3C1-203ENST00000562609 ZNF256Q9Y2P7 627 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-203ENST00000562609 MINOS1Q5TGZ0 78 aa10.5□□□□□ -0.73
GTF3C1-203ENST00000562609 EEF1AKMT3Q96AZ1 226 aa10.5□□□□□ -0.73
GTF3C1-203ENST00000562609 MINOS1-NBL1R4GNA1 71 aa10.5□□□□□ -0.73
GTF3C1-203ENST00000562609 IGLV11-55A0A075B6I3 123 aa10.5□□□□□ -0.73
GTF3C1-203ENST00000562609 G3V318 75 aa10.5□□□□□ -0.73
GTF3C1-203ENST00000562609 IGHV1-69DA0A0B4J2H0 117 aa10.49□□□□□ -0.73
GTF3C1-203ENST00000562609 IGHV3-66A0A0C4DH42 116 aa10.49□□□□□ -0.73
GTF3C1-203ENST00000562609 COX6CP09669 75 aa10.49□□□□□ -0.73
GTF3C1-203ENST00000562609 BBC3Q96PG8 261 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-203ENST00000562609 SMCR5Q8TEV8 140 aa10.49□□□□□ -0.73
GTF3C1-203ENST00000562609 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
GTF3C1-203ENST00000562609 DOPEY2Q9Y3R5 2298 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 PRSS2P07478 247 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 IGHV4-30-2A0A087WSY4 118 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 LEPROTO15243 131 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 ATP6V0E1O15342 81 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 COX7CP15954 63 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 RPS28P62857 69 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 Q6ZSV7 163 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 GPHB5Q86YW7 130 aa10.48□□□□□ -0.73
GTF3C1-203ENST00000562609 IGHV3OR16-13A0A075B7E8 117 aa10.47□□□□□ -0.73
GTF3C1-203ENST00000562609 IGHV3-74A0A0B4J1X5 117 aa10.47□□□□□ -0.73
GTF3C1-203ENST00000562609 CTSGP08311 255 aa10.47□□□□□ -0.73
GTF3C1-203ENST00000562609 TMEM141Q96I45 108 aa10.47□□□□□ -0.73
GTF3C1-203ENST00000562609 PHLDA3Q9Y5J5 127 aa10.47□□□□□ -0.73
GTF3C1-203ENST00000562609 NAV2Q8IVL1 2488 aa10.47□□□□□ -0.73
GTF3C1-203ENST00000562609 PRR9Q5T870 116 aa10.47□□□□□ -0.73
GTF3C1-203ENST00000562609 NBPF19A0A087WUL8 3843 aa10.46□□□□□ -0.73
GTF3C1-203ENST00000562609 LST1O00453 97 aa10.46□□□□□ -0.73
GTF3C1-203ENST00000562609 ADARB2-AS1A8MUL3 147 aa10.46□□□□□ -0.74
GTF3C1-203ENST00000562609 ACYP1P07311 99 aa10.46□□□□□ -0.74
GTF3C1-203ENST00000562609 IGHV4-38-2P0DP08 117 aa10.46□□□□□ -0.74
GTF3C1-203ENST00000562609 LINC00643Q86TS7 51 aa10.46□□□□□ -0.74
GTF3C1-203ENST00000562609 A0A0J9YXY3 114 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 hADV29S1A0JD25 119 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 C15orf32Q32M92 178 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 PIMREGQ9BSJ6 248 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 ZNF580Q9UK33 172 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 MXRA5Q9NR99 2828 aa10.45□□□□□ -0.74
GTF3C1-203ENST00000562609 IGF1P05019 195 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms