RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 GAGE12GP0CL81 117 aa10.21□□□□□ -0.77
COMMD4-205ENST00000562310 GAGE12IP0CL82 117 aa10.21□□□□□ -0.77
COMMD4-205ENST00000562310 EMP1P54849 157 aa10.21□□□□□ -0.77
COMMD4-205ENST00000562310 Q8NAQ8 132 aa10.21□□□□□ -0.77
COMMD4-205ENST00000562310 NIT2Q9NQR4 276 aa10.21□□□□□ -0.77
COMMD4-205ENST00000562310 IGLV2-18A0A075B6J9 118 aa10.2□□□□□ -0.78
COMMD4-205ENST00000562310 IGHV3-73A0A0B4J1V6 119 aa10.2□□□□□ -0.78
COMMD4-205ENST00000562310 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
COMMD4-205ENST00000562310 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
COMMD4-205ENST00000562310 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
COMMD4-205ENST00000562310 PKD1L1Q8TDX9 2849 aa10.19□□□□□ -0.78
COMMD4-205ENST00000562310 TCAPO15273 167 aa10.19□□□□□ -0.78
COMMD4-205ENST00000562310 ZNF479Q96JC4 524 aa10.19□□□□□ -0.78
COMMD4-205ENST00000562310 TMEM70Q9BUB7 260 aa10.19□□□□□ -0.78
COMMD4-205ENST00000562310 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
COMMD4-205ENST00000562310 SDHAF1A6NFY7 115 aa10.18□□□□□ -0.78
COMMD4-205ENST00000562310 K7EIL1 84 aa10.18□□□□□ -0.78
COMMD4-205ENST00000562310 VCYO14598 125 aa10.18□□□□□ -0.78
COMMD4-205ENST00000562310 HBDP02042 147 aa10.18□□□□□ -0.78
COMMD4-205ENST00000562310 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
COMMD4-205ENST00000562310 ORMDL2Q53FV1 153 aa10.18□□□□□ -0.78
COMMD4-205ENST00000562310 FAM19A2Q8N3H0 131 aa10.18□□□□□ -0.78
COMMD4-205ENST00000562310 TRBV27A0A0K0K1C4 114 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 K7EQD1 137 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 LAGE3Q14657 143 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 FAM222AQ5U5X8 452 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 KIR2DL4Q99706 377 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 DKK2Q9UBU2 259 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 HSPB8Q9UJY1 196 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 TNFRSF18Q9Y5U5 241 aa10.17□□□□□ -0.78
COMMD4-205ENST00000562310 LEPROTL1O95214 131 aa10.16□□□□□ -0.78
COMMD4-205ENST00000562310 SPART-AS1P0CW21 52 aa10.16□□□□□ -0.78
COMMD4-205ENST00000562310 SMIM6P0DI80 62 aa10.16□□□□□ -0.78
COMMD4-205ENST00000562310 DEFB130BP0DP73 79 aa10.16□□□□□ -0.78
COMMD4-205ENST00000562310 DEFB130AP0DP74 79 aa10.16□□□□□ -0.78
COMMD4-205ENST00000562310 G0S2P27469 103 aa10.16□□□□□ -0.78
COMMD4-205ENST00000562310 FCER1GP30273 86 aa10.16□□□□□ -0.78
COMMD4-205ENST00000562310 C11orf68Q9H3H3 251 aaKnown RBP10.16□□□□□ -0.78
COMMD4-205ENST00000562310 TRGV4A0A0C4DH28 118 aa10.15□□□□□ -0.78
COMMD4-205ENST00000562310 TRBV6-4A0A1B0GX49 114 aa10.15□□□□□ -0.78
COMMD4-205ENST00000562310 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
COMMD4-205ENST00000562310 PMCHL1Q16048 86 aa10.15□□□□□ -0.78
COMMD4-205ENST00000562310 Q6ZSN1 163 aa10.15□□□□□ -0.78
COMMD4-205ENST00000562310 NEXN-AS1Q8NBZ9 246 aa10.15□□□□□ -0.78
COMMD4-205ENST00000562310 SPATA25Q9BR10 227 aa10.15□□□□□ -0.78
COMMD4-205ENST00000562310 CMYA5Q8N3K9 4069 aa10.14□□□□□ -0.79
COMMD4-205ENST00000562310 I3L3M4 83 aa10.14□□□□□ -0.79
COMMD4-205ENST00000562310 DAD1P61803 113 aa10.14□□□□□ -0.79
COMMD4-205ENST00000562310 RPL36AP83881 106 aaKnown RBP10.14□□□□□ -0.79
COMMD4-205ENST00000562310 RHOHQ15669 191 aa10.14□□□□□ -0.79
COMMD4-205ENST00000562310 RPL36ALQ969Q0 106 aaKnown RBP10.14□□□□□ -0.79
COMMD4-205ENST00000562310 A0A096LNJ9 63 aa10.13□□□□□ -0.79
COMMD4-205ENST00000562310 NUDT3O95989 172 aa10.13□□□□□ -0.79
COMMD4-205ENST00000562310 PRB2P02812 416 aaPredicted RBP10.13□□□□□ -0.79
COMMD4-205ENST00000562310 FHL2Q14192 279 aa10.13□□□□□ -0.79
COMMD4-205ENST00000562310 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
COMMD4-205ENST00000562310 RETNQ9HD89 108 aa10.13□□□□□ -0.79
COMMD4-205ENST00000562310 DEFB4AO15263 64 aa10.12□□□□□ -0.79
COMMD4-205ENST00000562310 P0DMU3 169 aa10.12□□□□□ -0.79
COMMD4-205ENST00000562310 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
COMMD4-205ENST00000562310 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
COMMD4-205ENST00000562310 SLC25A29Q8N8R3 303 aa10.12□□□□□ -0.79
COMMD4-205ENST00000562310 TM2D3Q9BRN9 247 aa10.12□□□□□ -0.79
COMMD4-205ENST00000562310 DNAH3Q8TD57 4116 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 TRBV7-3A0A075B6L6 115 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 ATP5G1P05496 136 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 KRTDAPP60985 99 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
COMMD4-205ENST00000562310 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 NEGR1Q7Z3B1 354 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 SBSPONQ8IVN8 264 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 MGAM2Q2M2H8 2515 aa10.11□□□□□ -0.79
COMMD4-205ENST00000562310 NOTCH1P46531 2555 aa10.1□□□□□ -0.79
COMMD4-205ENST00000562310 ATP5LO75964 103 aa10.1□□□□□ -0.79
COMMD4-205ENST00000562310 TSHBP01222 138 aa10.1□□□□□ -0.79
COMMD4-205ENST00000562310 BTF3P20290 206 aaKnown RBP10.1□□□□□ -0.79
COMMD4-205ENST00000562310 DAZ4Q86SG3 579 aaKnown RBP10.1□□□□□ -0.79
COMMD4-205ENST00000562310 DAZ3Q9NR90 486 aaKnown RBP10.1□□□□□ -0.79
COMMD4-205ENST00000562310 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
COMMD4-205ENST00000562310 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
COMMD4-205ENST00000562310 C3orf79P0CE67 100 aa10.09□□□□□ -0.79
COMMD4-205ENST00000562310 COTL1Q14019 142 aa10.09□□□□□ -0.79
COMMD4-205ENST00000562310 PYY3Q5JQD4 70 aa10.09□□□□□ -0.79
COMMD4-205ENST00000562310 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
COMMD4-205ENST00000562310 TOMM6Q96B49 74 aa10.09□□□□□ -0.79
COMMD4-205ENST00000562310 HHLA3Q9XRX5 114 aa10.09□□□□□ -0.79
COMMD4-205ENST00000562310 CYSLTR1Q9Y271 337 aa10.09□□□□□ -0.79
COMMD4-205ENST00000562310 C20orf202A1L168 122 aa10.08□□□□□ -0.8
COMMD4-205ENST00000562310 UBE2D3P61077 147 aa10.08□□□□□ -0.8
COMMD4-205ENST00000562310 UBE2D2P62837 147 aa10.08□□□□□ -0.8
COMMD4-205ENST00000562310 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
COMMD4-205ENST00000562310 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
COMMD4-205ENST00000562310 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
COMMD4-205ENST00000562310 SYS1-DBNDD2H3BUS1 97 aa10.07□□□□□ -0.8
COMMD4-205ENST00000562310 SCGB1D1O95968 90 aa10.07□□□□□ -0.8
COMMD4-205ENST00000562310 LINC00694P0DN24 101 aa10.07□□□□□ -0.8
COMMD4-205ENST00000562310 CRYBA4P53673 196 aa10.07□□□□□ -0.8
COMMD4-205ENST00000562310 GAGE1Q13065 139 aa10.07□□□□□ -0.8
COMMD4-205ENST00000562310 GAGE4Q13068 117 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms