RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 F8VRH5 84 aa9.2□□□□□ -0.94
AC055717.2-201ENST00000561864 FGF6P10767 208 aa9.2□□□□□ -0.94
AC055717.2-201ENST00000561864 BATFQ16520 125 aa9.2□□□□□ -0.94
AC055717.2-201ENST00000561864 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
AC055717.2-201ENST00000561864 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
AC055717.2-201ENST00000561864 TMEM141Q96I45 108 aa9.2□□□□□ -0.94
AC055717.2-201ENST00000561864 TEP1Q99973 2627 aaKnown RBP9.2□□□□□ -0.94
AC055717.2-201ENST00000561864 AGRNO00468 2067 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 RS1O15537 224 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 CRLF1O75462 422 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 NEGR1Q7Z3B1 354 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 BOD1L2Q8IYS8 172 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 STPG4Q8N801 248 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 TIMM17AQ99595 171 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 C1QTNF4Q9BXJ3 329 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 MRPL35Q9NZE8 188 aaKnown RBP9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 HHLA3Q9XRX5 114 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 TP53TG1Q9Y2A0 90 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 TLN2Q9Y4G6 2542 aa9.19□□□□□ -0.94
AC055717.2-201ENST00000561864 I3L3M4 83 aa9.18□□□□□ -0.94
AC055717.2-201ENST00000561864 SIVA1O15304 175 aa9.18□□□□□ -0.94
AC055717.2-201ENST00000561864 SONP18583 2426 aaKnown RBP9.18□□□□□ -0.94
AC055717.2-201ENST00000561864 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
AC055717.2-201ENST00000561864 C12orf54Q6X4T0 127 aa9.18□□□□□ -0.94
AC055717.2-201ENST00000561864 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
AC055717.2-201ENST00000561864 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
AC055717.2-201ENST00000561864 MTORP42345 2549 aa9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 HIVEP2P31629 2446 aa9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 TSHBP01222 138 aa9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 INSL3P51460 131 aa9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 C2orf91Q6ZV80 131 aa9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 RNASE8Q8TDE3 154 aaKnown RBP9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 TMEM263Q8WUH6 116 aaKnown RBP9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 DNAJC30Q96LL9 226 aa9.17□□□□□ -0.94
AC055717.2-201ENST00000561864 IGIPA6NJ69 53 aa9.16□□□□□ -0.94
AC055717.2-201ENST00000561864 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
AC055717.2-201ENST00000561864 NMUP48645 174 aa9.16□□□□□ -0.94
AC055717.2-201ENST00000561864 HINT1P49773 126 aaPredicted RBP9.16□□□□□ -0.94
AC055717.2-201ENST00000561864 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
AC055717.2-201ENST00000561864 MRPL16Q9NX20 251 aaKnown RBP9.16□□□□□ -0.94
AC055717.2-201ENST00000561864 TP73-AS1Q9UF72 201 aa9.16□□□□□ -0.94
AC055717.2-201ENST00000561864 PRM2P04554 102 aa9.15□□□□□ -0.94
AC055717.2-201ENST00000561864 AZU1P20160 251 aa9.15□□□□□ -0.94
AC055717.2-201ENST00000561864 TMEM97Q5BJF2 176 aa9.15□□□□□ -0.94
AC055717.2-201ENST00000561864 PAPPA-AS1Q5QFB9 102 aa9.15□□□□□ -0.94
AC055717.2-201ENST00000561864 C16orf74Q96GX8 76 aa9.15□□□□□ -0.94
AC055717.2-201ENST00000561864 TNFRSF18Q9Y5U5 241 aa9.15□□□□□ -0.94
AC055717.2-201ENST00000561864 FN1P02751 2386 aaKnown RBP9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 PRSS29PA6NIE9 313 aa9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 GIG44P09565 113 aaPredicted RBP9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 PMVKQ15126 192 aa9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 C9orf66Q5T8R8 295 aa9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 GTSCR1Q86UQ5 136 aa9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 C20orf203Q8NBC4 194 aa9.14□□□□□ -0.95
AC055717.2-201ENST00000561864 IGHV3-73A0A0B4J1V6 119 aa9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 NPSP0C0P6 89 aa9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 DAZ2Q13117 558 aaKnown RBP9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 MPV17L2Q567V2 206 aa9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 BVES-AS1Q5T3Y7 98 aa9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 PCP2Q8IVA1 136 aa9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 WFDC10AQ9H1F0 79 aa9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 HIGD1BQ9P298 99 aa9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
AC055717.2-201ENST00000561864 IGKV2D-26A0A0A0MRZ7 120 aa9.12□□□□□ -0.95
AC055717.2-201ENST00000561864 TRAV4A0A0B4J268 109 aa9.12□□□□□ -0.95
AC055717.2-201ENST00000561864 RPL39P62891 51 aaKnown RBP9.12□□□□□ -0.95
AC055717.2-201ENST00000561864 HSD52Q0P140 79 aa9.12□□□□□ -0.95
AC055717.2-201ENST00000561864 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.12□□□□□ -0.95
AC055717.2-201ENST00000561864 OR4C5Q8NGB2 326 aa9.12□□□□□ -0.95
AC055717.2-201ENST00000561864 CST9LQ9H4G1 147 aa9.12□□□□□ -0.95
AC055717.2-201ENST00000561864 TRGV1A0A0A0MS02 117 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 CIDEAO60543 219 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 P0DMU3 169 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 SEC11AP67812 179 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 Q6ZSN1 163 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 CSNK1G2-AS1Q8NCQ2 148 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 CITED1Q99966 193 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 PYGO1Q9Y3Y4 419 aa9.11□□□□□ -0.95
AC055717.2-201ENST00000561864 TRBV10-1A0A0K0K1A3 114 aa9.1□□□□□ -0.95
AC055717.2-201ENST00000561864 E9PLD3 99 aa9.1□□□□□ -0.95
AC055717.2-201ENST00000561864 CRYBA4P53673 196 aa9.1□□□□□ -0.95
AC055717.2-201ENST00000561864 TCTAP57738 103 aa9.1□□□□□ -0.95
AC055717.2-201ENST00000561864 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
AC055717.2-201ENST00000561864 IGLV4-69A0A075B6H9 119 aa9.09□□□□□ -0.95
AC055717.2-201ENST00000561864 HERVK_113P61574 105 aa9.09□□□□□ -0.95
AC055717.2-201ENST00000561864 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
AC055717.2-201ENST00000561864 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
AC055717.2-201ENST00000561864 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
AC055717.2-201ENST00000561864 PLAC8L1A1L4L8 177 aa9.08□□□□□ -0.96
AC055717.2-201ENST00000561864 COTL1Q14019 142 aa9.08□□□□□ -0.96
AC055717.2-201ENST00000561864 Q6ZTI0 123 aa9.08□□□□□ -0.96
AC055717.2-201ENST00000561864 NFE4Q86UQ8 179 aa9.08□□□□□ -0.96
AC055717.2-201ENST00000561864 NIPBLQ6KC79 2804 aaeCLIP9.08□□□□□ -0.96
AC055717.2-201ENST00000561864 SETD2Q9BYW2 2564 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms