RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 A4D1N5 150 aa10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 DUSP14O95147 198 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 AVPP01185 164 aa10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 LGALS3P17931 250 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 AMELXQ99217 191 aa10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
RABGGTA-220ENST00000560998 CELSR1Q9NYQ6 3014 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 H3BUA1 57 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 PRB1P04280 392 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 C9orf47Q6ZRZ4 202 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 LINC01587Q99440 93 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 TIMM17AQ99595 171 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 SPANXCQ9NY87 97 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 UTP20O75691 2785 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 MYO18BQ8IUG5 2567 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 USP24Q9UPU5 2620 aa10.47□□□□□ -0.73
RABGGTA-220ENST00000560998 J3QQQ9 107 aa10.46□□□□□ -0.73
RABGGTA-220ENST00000560998 TRBV12-3P01733 135 aa10.46□□□□□ -0.73
RABGGTA-220ENST00000560998 DEFB121Q5J5C9 76 aa10.46□□□□□ -0.73
RABGGTA-220ENST00000560998 TEX49A0A1B0GTD5 131 aa10.46□□□□□ -0.74
RABGGTA-220ENST00000560998 TSPEAR-AS2P59090 65 aa10.46□□□□□ -0.74
RABGGTA-220ENST00000560998 BLCAPP62952 87 aa10.46□□□□□ -0.74
RABGGTA-220ENST00000560998 USMG5Q96IX5 58 aa10.46□□□□□ -0.74
RABGGTA-220ENST00000560998 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.74
RABGGTA-220ENST00000560998 CELSR2Q9HCU4 2923 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 A0A0J9YX75 114 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 M0R2P5 195 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 TMEM170BQ5T4T1 132 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 POM121L12Q8N7R1 296 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 TMEM101Q96IK0 257 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■□□□ 14.3
RABGGTA-220ENST00000560998 NDUFA4O00483 81 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 UNQ9165/PRO28630Q6UXU0 137 aa10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 RPL39LQ96EH5 51 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-220ENST00000560998 LEPROTO15243 131 aa10.44□□□□□ -0.74
RABGGTA-220ENST00000560998 Q1RN00 199 aa10.44□□□□□ -0.74
RABGGTA-220ENST00000560998 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
RABGGTA-220ENST00000560998 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-220ENST00000560998 MAP1AP78559 2803 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-220ENST00000560998 SDHAF1A6NFY7 115 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 EIF4EBP3O60516 100 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 TSHBP01222 138 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 ZNF876PQ49A33 203 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 LINC01356Q8N9X3 169 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 ZFHX3Q15911 3703 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 CRYBG3Q68DQ2 2970 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 A0A096LNT2 108 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 IGLV1-40P01703 118 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 IGHV3-11P01762 117 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 ACYP1P07311 99 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 PF4V1P10720 104 aa10.43□□□□□ -0.74
RABGGTA-220ENST00000560998 ATP5G1P05496 136 aa10.42□□□□□ -0.74
RABGGTA-220ENST00000560998 CFHR3Q02985 330 aa10.42□□□□□ -0.74
RABGGTA-220ENST00000560998 C5orf47Q569G3 176 aa10.42□□□□□ -0.74
RABGGTA-220ENST00000560998 C16orf92Q96LL3 132 aa10.42□□□□□ -0.74
RABGGTA-220ENST00000560998 PPDPFQ9H3Y8 114 aa10.42□□□□□ -0.74
RABGGTA-220ENST00000560998 C9orf139Q6ZV77 190 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 ZFYVE26Q68DK2 2539 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 IGHV4OR15-8A0A075B7B6 117 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 A0A087WW49 117 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 MGPP08493 103 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 COX6CP09669 75 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 ZNF56Q15929 161 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 GPHB5Q86YW7 130 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 CHCHD5Q9BSY4 110 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 ZNF462Q96JM2 2506 aa10.41□□□□□ -0.74
RABGGTA-220ENST00000560998 TRIAP1O43715 76 aa10.4□□□□□ -0.74
RABGGTA-220ENST00000560998 DEFB112Q30KQ8 113 aa10.4□□□□□ -0.74
RABGGTA-220ENST00000560998 ZNF843Q8N446 348 aa10.4□□□□□ -0.74
RABGGTA-220ENST00000560998 C14orf178Q8N769 122 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-220ENST00000560998 ZNF580Q9UK33 172 aa10.4□□□□□ -0.74
RABGGTA-220ENST00000560998 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
RABGGTA-220ENST00000560998 TRAV21A0A0B4J279 112 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 TMEM223A0PJW6 202 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 H7C2G1 150 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 J3QLI3 93 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 SOCS3O14543 225 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 LRRC75A-AS1Q8N1F1 130 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 ZNRF2Q8NHG8 242 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 CSDC2Q9Y534 153 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 ANKRD17O75179 2603 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 UBR5O95071 2799 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 A0A1B0GX51 115 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 H7C423 109 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 IGHV4-59P01825 116 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 ELANEP08246 267 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 ID1P41134 155 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
RABGGTA-220ENST00000560998 J3KRW8 73 aa10.38□□□□□ -0.75
RABGGTA-220ENST00000560998 VCYO14598 125 aa10.38□□□□□ -0.75
RABGGTA-220ENST00000560998 UQCRQO14949 82 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms