RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 OR5AC1P0C628 307 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 SFTA3P0C7M3 94 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 CHTF8P0CG12 524 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 HIST1H1DP16402 221 aaKnown RBP1.67□□□□□ -2.14
LRRC28-218ENST00000560236 RAB5AP20339 215 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 SNCAP37840 140 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 RPL35P42766 123 aaKnown RBP1.67□□□□□ -2.14
LRRC28-218ENST00000560236 PPT1P50897 306 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 RAB5CP51148 216 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 RND2P52198 227 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 RAB5BP61020 215 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 EIF5AP63241 154 aaKnown RBP1.67□□□□□ -2.14
LRRC28-218ENST00000560236 ARL6IP1Q15041 203 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 GUK1Q16774 197 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 OR10J3Q5JRS4 329 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 COA6Q5JTJ3 125 aaKnown RBP1.67□□□□□ -2.14
LRRC28-218ENST00000560236 FAM162BQ5T6X4 162 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 RPL7L1Q6DKI1 246 aaKnown RBP1.67□□□□□ -2.14
LRRC28-218ENST00000560236 EIF5AL1Q6IS14 154 aaKnown RBP1.67□□□□□ -2.14
LRRC28-218ENST00000560236 SDIM1Q6ZPB5 146 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 Q6ZTI0 123 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 GPR146Q96CH1 333 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 SEC22AQ96IW7 307 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 PGLYRP4Q96LB8 373 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 SCGB3A2Q96PL1 93 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 HDHD3Q9BSH5 251 aaPredicted RBP1.67□□□□□ -2.14
LRRC28-218ENST00000560236 WFDC1Q9HC57 220 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 PLAC8Q9NZF1 115 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IGLV1-50A0A075B6I6 118 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TRBV24-1A0A075B6N3 115 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TRGV1A0A0A0MS02 117 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TRGV4A0A0C4DH28 118 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 C1orf196B1AJZ1 125 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 K7EPK0 472 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 WRBO00258 174 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 MED6O75586 246 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IGHV3-30P01768 117 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IGHV3-33P01772 117 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IL4P05112 153 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 S100A6P06703 90 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 PFN1P07737 140 aaKnown RBP1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IGLC1P0CG04 106 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 PET100P0DJ07 73 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IGHV3-30-3P0DP02 117 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IGHV3-30-5P0DP03 117 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 DTYMKP23919 212 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 RPL12P30050 165 aaKnown RBP1.66□□□□□ -2.14
LRRC28-218ENST00000560236 S100A7P31151 101 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 OPRK1P41145 380 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 CAMLGP49069 296 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 SULT1A1P50225 295 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 AKR1D1P51857 326 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 AKR1C2P52895 323 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TAS2R46P59540 309 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 HSPE1P61604 102 aaKnown RBP1.66□□□□□ -2.14
LRRC28-218ENST00000560236 RHOBP62745 196 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 AKR1C1Q04828 323 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 Q0VG73 95 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 ELOBQ15370 118 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 PYY3Q5JQD4 70 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 IGFL1Q6UW32 110 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 OR51G1Q8NGK1 321 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 OR4D5Q8NGN0 318 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 OR5H2Q8NGV7 314 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 ARHGAP5-AS1Q96IT6 56 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 GPR82Q96P67 336 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 PDCD10Q9BUL8 212 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 GGACTQ9BVM4 153 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 PECRQ9BY49 303 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 NAA60Q9H7X0 242 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TMEM242Q9NWH2 141 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TMEM56-RWDD3S4R434 201 aa1.66□□□□□ -2.14
LRRC28-218ENST00000560236 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 DUXBA0A1W2PPF3 345 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 IGSF23A1L1A6 192 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 PCP4L1A6NKN8 68 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 UMAD1C9J7I0 102 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 F8WDY8 70 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BKO60814 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 CDS2O95674 445 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 PMP2P02689 132 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 TYMSP04818 313 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BJP06899 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 SRP19P09132 144 aaKnown RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 RD3LP0DJH9 198 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 SLC25A6P12236 298 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 AKR1C4P17516 323 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BOP23527 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 F2RP25116 425 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BBP33778 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 GPX4P36969 197 aaPredicted RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 RPL13AP40429 203 aaKnown RBP1.65□□□□□ -2.15
LRRC28-218ENST00000560236 GALR1P47211 349 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BDP58876 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST1H2BCP62807 126 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 FABP9Q0Z7S8 132 aa1.65□□□□□ -2.15
LRRC28-218ENST00000560236 HIST2H2BEQ16778 126 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms