RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CDKN2A-AS1Q9UH64 79 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 C22orf34Q6ZV56 151 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 BEAN1Q3B7T3 259 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 NHSL1Q5SYE7 1610 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 COL22A1Q8NFW1 1626 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 TRBV7-6A0A0J9YX20 115 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 SBF2Q86WG5 1849 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 NHLRC4P0CG21 123 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 DOT1LQ8TEK3 1739 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 EPG5Q9HCE0 2579 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 XIRP1Q702N8 1843 aaKnown RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 A0A096LPF7 62 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 EDN2P20800 178 aa2.8□□□□□ -1.96
ATXN3-248ENST00000558190 USP9XQ93008 2570 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-248ENST00000558190 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 A0A0G2JNJ9 132 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 LYRM9A8MSI8 78 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 Q9UFV3 132 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 DOCK2Q92608 1830 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 GPHB5Q86YW7 130 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 ESM1Q9NQ30 184 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV1-69DA0A0B4J2H0 117 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV1-69P01742 117 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 FAM19A4Q96LR4 140 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 MIAQ16674 131 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 NDUFA4O00483 81 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 RPL18AQ02543 176 aaKnown RBP2.79□□□□□ -1.96
ATXN3-248ENST00000558190 TRPM3Q9HCF6 1732 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-248ENST00000558190 K7EMT4 169 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 OVOL3O00110 214 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 MAST2Q6P0Q8 1798 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 TRBV7-3A0A075B6L6 115 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 PF4P02776 101 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 ANGP03950 147 aaKnown RBP2.79□□□□□ -1.96
ATXN3-248ENST00000558190 HIGD2BQ4VC39 106 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 Q6ZS46 218 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 SEM1Q6ZVN7 128 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 DOCK3Q8IZD9 2030 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 ATP6V0E1O15342 81 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 GYPEP15421 78 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 CRIP3Q6Q6R5 217 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 SPRY4Q9C004 299 aa2.79□□□□□ -1.96
ATXN3-248ENST00000558190 FAM30AQ9NZY2 134 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 CASP8AP2Q9UKL3 1982 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 LAMB2P55268 1798 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.78□□□□□ -1.96
ATXN3-248ENST00000558190 DEFB116Q30KQ4 102 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 KIF13BQ9NQT8 1826 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 Q6ZSN1 163 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 IGLV10-54A0A075B6I4 117 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 GP9P14770 177 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 KCPQ6ZWJ8 1503 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 C9orf139Q6ZV77 190 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 C11orf21Q9P2W6 132 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 LRRC37A3O60309 1634 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 DDX60LQ5H9U9 1706 aaKnown RBP2.78□□□□□ -1.96
ATXN3-248ENST00000558190 A0A087WZ39 114 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 LINC00269Q8N2A0 174 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 TRAV10A0A0B4J240 114 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 PRM2P04554 102 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 TIMM17AQ99595 171 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 SCN4AP35499 1836 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 IGHV4-59P01825 116 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 LENEPQ9Y5L5 61 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 TRPM7Q96QT4 1865 aa2.78□□□□□ -1.96
ATXN3-248ENST00000558190 COX6A2Q02221 97 aa2.78□□□□□ -1.97
ATXN3-248ENST00000558190 LINC00574Q9H8X3 128 aa2.78□□□□□ -1.97
ATXN3-248ENST00000558190 ROBO1Q9Y6N7 1651 aa2.78□□□□□ -1.97
ATXN3-248ENST00000558190 ZFP36P26651 326 aaKnown RBP2.78□□□□□ -1.97
ATXN3-248ENST00000558190 CD59P13987 128 aa2.78□□□□□ -1.97
ATXN3-248ENST00000558190 HCFC1P51610 2035 aa2.78□□□□□ -1.97
ATXN3-248ENST00000558190 B4DSR2 109 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 TMEM105Q8N8V8 129 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 PHIPQ8WWQ0 1821 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 ETDCA0A1B0GVM5 59 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 SMIM11BQ8TCY0 68 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 Q6JHZ5 121 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 ARFGEF1Q9Y6D6 1849 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 NKAPP1Q8N9T2 125 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 SIPA1L3O60292 1781 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-248ENST00000558190 MYO5AQ9Y4I1 1855 aaKnown RBP2.77□□□□□ -1.97
ATXN3-248ENST00000558190 COX6B1P14854 86 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 C1orf158Q8N1D5 194 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 ATAD5Q96QE3 1844 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 POLR2KP53803 58 aaKnown RBP2.77□□□□□ -1.97
ATXN3-248ENST00000558190 IGHV7-81A0A0B4J1V7 117 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 Q6ZSV7 163 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 PRR15LQ9BU68 103 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 RMI2Q96E14 147 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 A0A0J9YWU9 116 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 Q6ZPA2 131 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 APRG1Q8IVJ8 170 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 LINC00846Q9NV44 126 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 RUSC1-AS1Q66K80 236 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 Q8N814 137 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 TRBV6-5A0A0K0K1A5 114 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 TRBV7-7A0A0K0K1E9 115 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 STRCQ7RTU9 1775 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 CRYGDP07320 174 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms