RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
ABCD4-228ENST00000557588 TRBV25-1A0A075B6N4 114 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 TRAV8-4A0A0B4J246 113 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 INMT-MINDY4F8WBC2 141 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 P01737 135 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 DERL1Q9BUN8 251 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 LPAP08519 4548 aa11.5□□□□□ -0.57
ABCD4-228ENST00000557588 SSNA1O43805 119 aa11.49□□□□□ -0.57
ABCD4-228ENST00000557588 OR10AG1Q8NH19 301 aa11.49□□□□□ -0.57
ABCD4-228ENST00000557588 FMC1Q96HJ9 113 aa11.49□□□□□ -0.57
ABCD4-228ENST00000557588 TNFSF18Q9UNG2 199 aa11.49□□□□□ -0.57
ABCD4-228ENST00000557588 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
ABCD4-228ENST00000557588 UBE2G2P60604 165 aa11.48□□□□□ -0.57
ABCD4-228ENST00000557588 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
ABCD4-228ENST00000557588 GZMBP10144 247 aa11.47□□□□□ -0.57
ABCD4-228ENST00000557588 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
ABCD4-228ENST00000557588 C20orf203Q8NBC4 194 aa11.47□□□□□ -0.57
ABCD4-228ENST00000557588 MARVELD1Q9BSK0 173 aa11.47□□□□□ -0.57
ABCD4-228ENST00000557588 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 LTAP01374 205 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 CXCL1P09341 107 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 UBE2G1P62253 170 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 SPINK6Q6UWN8 80 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 GTSF1Q8WW33 167 aa11.46□□□□□ -0.57
ABCD4-228ENST00000557588 ZNF471Q9BX82 626 aaPredicted RBP11.46□□□□□ -0.57
ABCD4-228ENST00000557588 COX6A2Q02221 97 aa11.45□□□□□ -0.58
ABCD4-228ENST00000557588 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
ABCD4-228ENST00000557588 F5H697 171 aa11.44□□□□□ -0.58
ABCD4-228ENST00000557588 SNAI2O43623 268 aa11.44□□□□□ -0.58
ABCD4-228ENST00000557588 NDUFS6O75380 124 aaKnown RBP11.44□□□□□ -0.58
ABCD4-228ENST00000557588 UPK1BO75841 260 aa11.44□□□□□ -0.58
ABCD4-228ENST00000557588 C15orf56Q8N910 161 aa11.44□□□□□ -0.58
ABCD4-228ENST00000557588 AQP10Q96PS8 301 aa11.44□□□□□ -0.58
ABCD4-228ENST00000557588 GFRA4Q9GZZ7 299 aa11.44□□□□□ -0.58
ABCD4-228ENST00000557588 A0A1B0GUV1 79 aa11.43□□□□□ -0.58
ABCD4-228ENST00000557588 MAJINQ3KP22 176 aa11.43□□□□□ -0.58
ABCD4-228ENST00000557588 S100ZQ8WXG8 99 aa11.43□□□□□ -0.58
ABCD4-228ENST00000557588 TCEAL7Q9BRU2 100 aa11.43□□□□□ -0.58
ABCD4-228ENST00000557588 SSBP4Q9BWG4 385 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-228ENST00000557588 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
ABCD4-228ENST00000557588 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
ABCD4-228ENST00000557588 OR5AL1P0C617 328 aa11.42□□□□□ -0.58
ABCD4-228ENST00000557588 STPG4Q8N801 248 aa11.42□□□□□ -0.58
ABCD4-228ENST00000557588 PRSS3P2Q8NHM4 247 aa11.42□□□□□ -0.58
ABCD4-228ENST00000557588 IGKV2-24A0A0C4DH68 120 aa11.41□□□□□ -0.58
ABCD4-228ENST00000557588 RPS10P46783 165 aaKnown RBP11.41□□□□□ -0.58
ABCD4-228ENST00000557588 RAB5CP51148 216 aa11.41□□□□□ -0.58
ABCD4-228ENST00000557588 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
ABCD4-228ENST00000557588 A6NHS1 94 aa11.4□□□□□ -0.58
ABCD4-228ENST00000557588 IFITM3Q01628 133 aa11.4□□□□□ -0.58
ABCD4-228ENST00000557588 AP1S3Q96PC3 154 aa11.4□□□□□ -0.58
ABCD4-228ENST00000557588 SRSF9Q13242 221 aaKnown RBP eCLIP11.39□□□□□ -0.59
ABCD4-228ENST00000557588 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
ABCD4-228ENST00000557588 LYPD6BQ8NI32 183 aa11.39□□□□□ -0.59
ABCD4-228ENST00000557588 TMEM243Q9BU79 118 aa11.39□□□□□ -0.59
ABCD4-228ENST00000557588 MUC21A0A140T8X8 626 aa11.38□□□□□ -0.59
ABCD4-228ENST00000557588 M0QY20 66 aa11.38□□□□□ -0.59
ABCD4-228ENST00000557588 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
ABCD4-228ENST00000557588 FHITP49789 147 aa11.38□□□□□ -0.59
ABCD4-228ENST00000557588 NDUFA13Q9P0J0 144 aa11.38□□□□□ -0.59
ABCD4-228ENST00000557588 MUC2Q02817 5179 aa11.37□□□□□ -0.59
ABCD4-228ENST00000557588 A0A096LNI7 61 aa11.37□□□□□ -0.59
ABCD4-228ENST00000557588 AKR1C3P42330 323 aa11.37□□□□□ -0.59
ABCD4-228ENST00000557588 INO80EQ8NBZ0 244 aaPredicted RBP11.37□□□□□ -0.59
ABCD4-228ENST00000557588 GVQW2A0A096LPI5 108 aaPredicted RBP11.36□□□□□ -0.59
ABCD4-228ENST00000557588 SULT1A2P50226 295 aa11.36□□□□□ -0.59
ABCD4-228ENST00000557588 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
ABCD4-228ENST00000557588 PGLYRP4Q96LB8 373 aa11.36□□□□□ -0.59
ABCD4-228ENST00000557588 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
ABCD4-228ENST00000557588 H7C1H1 209 aa11.35□□□□□ -0.59
ABCD4-228ENST00000557588 DEFA3P59666 94 aa11.35□□□□□ -0.59
ABCD4-228ENST00000557588 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
ABCD4-228ENST00000557588 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
ABCD4-228ENST00000557588 MAP1LC3B2A6NCE7 125 aa11.34□□□□□ -0.59
ABCD4-228ENST00000557588 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
ABCD4-228ENST00000557588 Q6ZRP5 223 aa11.34□□□□□ -0.59
ABCD4-228ENST00000557588 STOML3Q8TAV4 291 aa11.34□□□□□ -0.59
ABCD4-228ENST00000557588 MLST8Q9BVC4 326 aa11.34□□□□□ -0.59
ABCD4-228ENST00000557588 MAP1LC3BQ9GZQ8 125 aa11.34□□□□□ -0.59
ABCD4-228ENST00000557588 MGPP08493 103 aa11.33□□□□□ -0.6
ABCD4-228ENST00000557588 NKX2-5P52952 324 aaPredicted RBP11.33□□□□□ -0.6
ABCD4-228ENST00000557588 SSTP61278 116 aa11.33□□□□□ -0.6
ABCD4-228ENST00000557588 CST9LP1Q5W188 147 aa11.33□□□□□ -0.6
ABCD4-228ENST00000557588 KRTAP9-2Q9BYQ4 174 aa11.33□□□□□ -0.6
ABCD4-228ENST00000557588 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
ABCD4-228ENST00000557588 UBE2L6O14933 153 aa11.32□□□□□ -0.6
ABCD4-228ENST00000557588 AKR1C8PQ5T2L2 129 aa11.32□□□□□ -0.6
ABCD4-228ENST00000557588 PKIGQ9Y2B9 76 aa11.32□□□□□ -0.6
ABCD4-228ENST00000557588 S100A9P06702 114 aaKnown RBP11.31□□□□□ -0.6
ABCD4-228ENST00000557588 MED28Q9H204 178 aa11.31□□□□□ -0.6
ABCD4-228ENST00000557588 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
ABCD4-228ENST00000557588 AMTP48728 403 aa11.29□□□□□ -0.6
ABCD4-228ENST00000557588 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
ABCD4-228ENST00000557588 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
ABCD4-228ENST00000557588 DEFA1P59665 94 aa11.28□□□□□ -0.6
ABCD4-228ENST00000557588 Q5BKY6 102 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 425.2 ms