RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SLPIP03973 132 aa7.78□□□□□ -1.16
SNX6-209ENST00000557265 ZNF726P1Q15940 193 aa7.78□□□□□ -1.16
SNX6-209ENST00000557265 TMEM97Q5BJF2 176 aa7.78□□□□□ -1.16
SNX6-209ENST00000557265 SPACA4Q8TDM5 124 aa7.78□□□□□ -1.16
SNX6-209ENST00000557265 LINC01600Q96MT4 127 aa7.78□□□□□ -1.16
SNX6-209ENST00000557265 DERL1Q9BUN8 251 aa7.78□□□□□ -1.16
SNX6-209ENST00000557265 TRBV25-1A0A075B6N4 114 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
SNX6-209ENST00000557265 A6NHS1 94 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 F5H697 171 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 UBE2G1P62253 170 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 REG3AQ06141 175 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 OR10AG1Q8NH19 301 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 C7orf33Q8WU49 177 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 FMC1Q96HJ9 113 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
SNX6-209ENST00000557265 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 VAX2Q9UIW0 290 aa7.77□□□□□ -1.17
SNX6-209ENST00000557265 TRBV6-1A0A0K0K1D8 114 aa7.76□□□□□ -1.17
SNX6-209ENST00000557265 CTXND1A0A1B0GTU2 59 aa7.76□□□□□ -1.17
SNX6-209ENST00000557265 AQP10Q96PS8 301 aa7.76□□□□□ -1.17
SNX6-209ENST00000557265 ZNF471Q9BX82 626 aaPredicted RBP7.76□□□□□ -1.17
SNX6-209ENST00000557265 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
SNX6-209ENST00000557265 KIF25-AS1Q9Y6Z4 181 aa7.76□□□□□ -1.17
SNX6-209ENST00000557265 MUC21A0A0G2JKD1 596 aa7.75□□□□□ -1.17
SNX6-209ENST00000557265 MUC21A0A140T8X8 626 aa7.75□□□□□ -1.17
SNX6-209ENST00000557265 LTAP01374 205 aa7.75□□□□□ -1.17
SNX6-209ENST00000557265 RAB5CP51148 216 aa7.75□□□□□ -1.17
SNX6-209ENST00000557265 DEFA3P59666 94 aa7.75□□□□□ -1.17
SNX6-209ENST00000557265 SSTP61278 116 aa7.75□□□□□ -1.17
SNX6-209ENST00000557265 GTSF1Q8WW33 167 aa7.75□□□□□ -1.17
SNX6-209ENST00000557265 TRAV8-4A0A0B4J246 113 aa7.74□□□□□ -1.17
SNX6-209ENST00000557265 P01737 135 aa7.74□□□□□ -1.17
SNX6-209ENST00000557265 IQCJQ1A5X6 159 aa7.74□□□□□ -1.17
SNX6-209ENST00000557265 RPL7L1Q6DKI1 246 aaKnown RBP7.74□□□□□ -1.17
SNX6-209ENST00000557265 C20orf203Q8NBC4 194 aa7.74□□□□□ -1.17
SNX6-209ENST00000557265 IGHV1-24A0A0C4DH33 117 aa7.73□□□□□ -1.17
SNX6-209ENST00000557265 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
SNX6-209ENST00000557265 COX6A2Q02221 97 aa7.73□□□□□ -1.17
SNX6-209ENST00000557265 SPANXN1Q5VSR9 72 aa7.73□□□□□ -1.17
SNX6-209ENST00000557265 IGLV4-60A0A075B6I1 120 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 A0A0J9YXV3 536 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 SNAI2O43623 268 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 GZMBP10144 247 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 MAJINQ3KP22 176 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 CST9LP1Q5W188 147 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 WDR73Q6P4I2 378 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
SNX6-209ENST00000557265 GFRA4Q9GZZ7 299 aa7.72□□□□□ -1.17
SNX6-209ENST00000557265 BORCS7-ASMTA0A0B4J1R7 106 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 GAS8-AS1O95177 125 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 CXCL1P09341 107 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 SMIM17P0DL12 118 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 AKR1C3P42330 323 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 DEFA1P59665 94 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 Q5BKY6 102 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 AKR1C8PQ5T2L2 129 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 STOML3Q8TAV4 291 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 TCEAL7Q9BRU2 100 aa7.71□□□□□ -1.18
SNX6-209ENST00000557265 IGKV2-24A0A0C4DH68 120 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 A0A1B0GUV1 79 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 MAP1LC3B2A6NCE7 125 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 OR5AL1P0C617 328 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 FHITP49789 147 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 LYPD6BQ8NI32 183 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 TMEM243Q9BU79 118 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 MAP1LC3BQ9GZQ8 125 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 ALG5Q9Y673 324 aa7.7□□□□□ -1.18
SNX6-209ENST00000557265 M0QY20 66 aa7.69□□□□□ -1.18
SNX6-209ENST00000557265 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
SNX6-209ENST00000557265 RPS10P46783 165 aaKnown RBP7.69□□□□□ -1.18
SNX6-209ENST00000557265 STPG4Q8N801 248 aa7.69□□□□□ -1.18
SNX6-209ENST00000557265 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
SNX6-209ENST00000557265 INO80EQ8NBZ0 244 aaPredicted RBP7.69□□□□□ -1.18
SNX6-209ENST00000557265 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
SNX6-209ENST00000557265 GAGE12HA6NDE8 117 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 PAGE4O60829 102 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 MGPP08493 103 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 SULT1A2P50226 295 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 NKX2-5P52952 324 aaPredicted RBP7.68□□□□□ -1.18
SNX6-209ENST00000557265 HIGD2BQ4VC39 106 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 MLST8Q9BVC4 326 aa7.68□□□□□ -1.18
SNX6-209ENST00000557265 H7C1H1 209 aa7.67□□□□□ -1.18
SNX6-209ENST00000557265 S100A9P06702 114 aaKnown RBP7.67□□□□□ -1.18
SNX6-209ENST00000557265 SUMO4Q6EEV6 95 aa7.67□□□□□ -1.18
SNX6-209ENST00000557265 FXYD6-FXYD2A0A087WZ82 144 aa7.66□□□□□ -1.18
SNX6-209ENST00000557265 IGKV3OR2-268A0A0C4DH90 116 aa7.66□□□□□ -1.18
SNX6-209ENST00000557265 TPPP3Q9BW30 176 aa7.66□□□□□ -1.18
SNX6-209ENST00000557265 MED28Q9H204 178 aa7.66□□□□□ -1.18
SNX6-209ENST00000557265 A0A096LNI7 61 aa7.65□□□□□ -1.18
SNX6-209ENST00000557265 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
SNX6-209ENST00000557265 UBE2L6O14933 153 aa7.65□□□□□ -1.18
SNX6-209ENST00000557265 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.181e-7■■■■□ 24.7
SNX6-209ENST00000557265 AMTP48728 403 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms