RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 GAGE12JA6NER3 117 aa12.1□□□□□ -0.47
TUBB3-211ENST00000556536 SCO1O75880 301 aa12.1□□□□□ -0.47
TUBB3-211ENST00000556536 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
TUBB3-211ENST00000556536 GAGE1Q13065 139 aa12.1□□□□□ -0.47
TUBB3-211ENST00000556536 GAGE4Q13068 117 aa12.1□□□□□ -0.47
TUBB3-211ENST00000556536 GAGE5Q13069 117 aa12.1□□□□□ -0.47
TUBB3-211ENST00000556536 GAGE13Q4V321 117 aa12.1□□□□□ -0.47
TUBB3-211ENST00000556536 S100A1P23297 94 aa12.09□□□□□ -0.47
TUBB3-211ENST00000556536 MRPL51Q4U2R6 128 aaKnown RBP12.09□□□□□ -0.47
TUBB3-211ENST00000556536 RASL11AQ6T310 242 aa12.09□□□□□ -0.47
TUBB3-211ENST00000556536 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
TUBB3-211ENST00000556536 C15orf53Q8NAA6 179 aa12.09□□□□□ -0.47
TUBB3-211ENST00000556536 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
TUBB3-211ENST00000556536 TRBV10-1A0A0K0K1A3 114 aa12.08□□□□□ -0.48
TUBB3-211ENST00000556536 SMKR1H3BMG3 65 aa12.08□□□□□ -0.48
TUBB3-211ENST00000556536 NEXN-AS1Q8NBZ9 246 aa12.08□□□□□ -0.48
TUBB3-211ENST00000556536 TRBV24-1A0A075B6N3 115 aa12.07□□□□□ -0.48
TUBB3-211ENST00000556536 NCR2O95944 276 aa12.07□□□□□ -0.48
TUBB3-211ENST00000556536 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
TUBB3-211ENST00000556536 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
TUBB3-211ENST00000556536 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
TUBB3-211ENST00000556536 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
TUBB3-211ENST00000556536 H7C1H1 209 aa12.06□□□□□ -0.48
TUBB3-211ENST00000556536 SRIP30626 198 aa12.06□□□□□ -0.48
TUBB3-211ENST00000556536 TCTAP57738 103 aa12.06□□□□□ -0.48
TUBB3-211ENST00000556536 MRAP2Q96G30 205 aa12.06□□□□□ -0.48
TUBB3-211ENST00000556536 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
TUBB3-211ENST00000556536 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
TUBB3-211ENST00000556536 FRZBQ92765 325 aa12.05□□□□□ -0.48
TUBB3-211ENST00000556536 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
TUBB3-211ENST00000556536 GNB1LQ9BYB4 327 aa12.05□□□□□ -0.48
TUBB3-211ENST00000556536 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
TUBB3-211ENST00000556536 TRBV7-3A0A075B6L6 115 aa12.04□□□□□ -0.48
TUBB3-211ENST00000556536 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
TUBB3-211ENST00000556536 ALMS1Q8TCU4 4167 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 D6R8Y8 96 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 CKS2P33552 79 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 UBE2D3P61077 147 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 UBE2D2P62837 147 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 NRACQ8N912 160 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 DNAJC30Q96LL9 226 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 TNFRSF18Q9Y5U5 241 aa12.03□□□□□ -0.48
TUBB3-211ENST00000556536 HLA-DQA1P01909 254 aa12.02□□□□□ -0.49
TUBB3-211ENST00000556536 APCSP02743 223 aa12.02□□□□□ -0.49
TUBB3-211ENST00000556536 ESRGQ1W209 222 aa12.02□□□□□ -0.49
TUBB3-211ENST00000556536 COX19Q49B96 90 aa12.02□□□□□ -0.49
TUBB3-211ENST00000556536 OR10J3Q5JRS4 329 aa12.02□□□□□ -0.49
TUBB3-211ENST00000556536 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.49
TUBB3-211ENST00000556536 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
TUBB3-211ENST00000556536 KIAA1644Q3SXP7 199 aa12.01□□□□□ -0.49
TUBB3-211ENST00000556536 LYPD5Q6UWN5 251 aa12.01□□□□□ -0.49
TUBB3-211ENST00000556536 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
TUBB3-211ENST00000556536 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
TUBB3-211ENST00000556536 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
TUBB3-211ENST00000556536 COLCA2A8K830 154 aa12□□□□□ -0.49
TUBB3-211ENST00000556536 ORMDL3Q8N138 153 aa12□□□□□ -0.49
TUBB3-211ENST00000556536 NPYP01303 97 aa11.99□□□□□ -0.49
TUBB3-211ENST00000556536 PPBPP02775 128 aa11.99□□□□□ -0.49
TUBB3-211ENST00000556536 MT-ND6P03923 174 aa11.99□□□□□ -0.49
TUBB3-211ENST00000556536 GTSF1LQ9H1H1 148 aa11.99□□□□□ -0.49
TUBB3-211ENST00000556536 ST20Q9HBF5 79 aa11.99□□□□□ -0.49
TUBB3-211ENST00000556536 LINC00588Q9Y4M8 146 aa11.99□□□□□ -0.49
TUBB3-211ENST00000556536 TNFRSF6BO95407 300 aa11.98□□□□□ -0.49
TUBB3-211ENST00000556536 FABP9Q0Z7S8 132 aa11.98□□□□□ -0.49
TUBB3-211ENST00000556536 DEFB104AQ8WTQ1 72 aa11.98□□□□□ -0.49
TUBB3-211ENST00000556536 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
TUBB3-211ENST00000556536 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
TUBB3-211ENST00000556536 SDHAF1A6NFY7 115 aa11.97□□□□□ -0.49
TUBB3-211ENST00000556536 PPP1R17O96001 155 aa11.97□□□□□ -0.49
TUBB3-211ENST00000556536 CCL18P55774 89 aa11.97□□□□□ -0.49
TUBB3-211ENST00000556536 DAZ4Q86SG3 579 aaKnown RBP11.97□□□□□ -0.49
TUBB3-211ENST00000556536 DAZ3Q9NR90 486 aaKnown RBP11.97□□□□□ -0.49
TUBB3-211ENST00000556536 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.49
TUBB3-211ENST00000556536 TIRAPP58753 221 aa11.96□□□□□ -0.49
TUBB3-211ENST00000556536 SUMO2P61956 95 aaKnown RBP11.96□□□□□ -0.49
TUBB3-211ENST00000556536 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
TUBB3-211ENST00000556536 NTM-AS1Q6ZSK4 140 aa11.95□□□□□ -0.5
TUBB3-211ENST00000556536 C20orf78Q9BR46 151 aa11.95□□□□□ -0.5
TUBB3-211ENST00000556536 PHOX2AO14813 284 aa11.94□□□□□ -0.5
TUBB3-211ENST00000556536 RAB5AP20339 215 aa11.94□□□□□ -0.5
TUBB3-211ENST00000556536 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
TUBB3-211ENST00000556536 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
TUBB3-211ENST00000556536 LINC00476Q8WZB0 136 aa11.94□□□□□ -0.5
TUBB3-211ENST00000556536 ALKBH7Q9BT30 221 aaPredicted RBP11.94□□□□□ -0.5
TUBB3-211ENST00000556536 MRPS16Q9Y3D3 137 aaKnown RBP11.94□□□□□ -0.5
TUBB3-211ENST00000556536 LELP1Q5T871 98 aa11.93□□□□□ -0.5
TUBB3-211ENST00000556536 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.93□□□□□ -0.5
TUBB3-211ENST00000556536 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
TUBB3-211ENST00000556536 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
TUBB3-211ENST00000556536 TRBV27A0A0K0K1C4 114 aa11.92□□□□□ -0.5
TUBB3-211ENST00000556536 I3L3M4 83 aa11.92□□□□□ -0.5
TUBB3-211ENST00000556536 VCYO14598 125 aa11.92□□□□□ -0.5
TUBB3-211ENST00000556536 LY6G6CO95867 125 aa11.92□□□□□ -0.5
TUBB3-211ENST00000556536 PMCHP20382 165 aa11.92□□□□□ -0.5
TUBB3-211ENST00000556536 LOC389332A0A1B0GUA5 103 aa11.91□□□□□ -0.5
TUBB3-211ENST00000556536 TSHBP01222 138 aa11.91□□□□□ -0.5
TUBB3-211ENST00000556536 TRGC2P03986 189 aa11.91□□□□□ -0.5
TUBB3-211ENST00000556536 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
TUBB3-211ENST00000556536 WFDC10BQ8IUB3 73 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms