RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 BAALCQ8WXS3 180 aa10.91□□□□□ -0.66
PPP4R3A-201ENST00000554308 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
PPP4R3A-201ENST00000554308 A0A1B0GWB2 263 aa10.9□□□□□ -0.66
PPP4R3A-201ENST00000554308 LINC01619G3V211 115 aa10.9□□□□□ -0.66
PPP4R3A-201ENST00000554308 EMP1P54849 157 aa10.9□□□□□ -0.66
PPP4R3A-201ENST00000554308 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
PPP4R3A-201ENST00000554308 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
PPP4R3A-201ENST00000554308 SNRPD3P62318 126 aaKnown RBP10.9□□□□□ -0.67
PPP4R3A-201ENST00000554308 SPATA25Q9BR10 227 aa10.9□□□□□ -0.67
PPP4R3A-201ENST00000554308 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.67
PPP4R3A-201ENST00000554308 SMCPP49901 116 aaPredicted RBP10.89□□□□□ -0.67
PPP4R3A-201ENST00000554308 C2orf66Q6UXQ4 117 aa10.89□□□□□ -0.67
PPP4R3A-201ENST00000554308 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
PPP4R3A-201ENST00000554308 ZNF815PA8K554 130 aa10.89□□□□□ -0.67
PPP4R3A-201ENST00000554308 C4orf3Q8WVX3 66 aa10.89□□□□□ -0.67
PPP4R3A-201ENST00000554308 HIVEP1P15822 2718 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 TRAV21A0A0B4J279 112 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 LINC01549A6NIU2 74 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 J3QR89 54 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 GNRH2O43555 120 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 ANXA2RQ3ZCQ2 193 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 ORMDL2Q53FV1 153 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 ZFP2Q6ZN57 461 aa10.88□□□□□ -0.67
PPP4R3A-201ENST00000554308 K7EQG2 157 aa10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 DUSP14O95147 198 aaKnown RBP10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 CD28P10747 220 aa10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 S100A4P26447 101 aaKnown RBP10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 APOMO95445 188 aa10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 PTH2Q96A98 100 aa10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 PHLDA3Q9Y5J5 127 aa10.87□□□□□ -0.67
PPP4R3A-201ENST00000554308 TRAV12-2A0A075B6T6 113 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 SCGB1A1P11684 91 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 NFE4Q86UQ8 179 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 FAM19A4Q96LR4 140 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 CRYGDP07320 174 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 LINC01006Q8NI28 216 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
PPP4R3A-201ENST00000554308 NSD1Q96L73 2696 aaPredicted RBP10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 LOC107984156A0A0G2JMH3 177 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 TSPAN13O95857 204 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 PSMB2P49721 201 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 FHL3Q13643 280 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 ARL17AQ8IVW1 177 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 ZNF418Q8TF45 676 aaPredicted RBP10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 C11orf86A6NJI1 115 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 TSHBP01222 138 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 SRSF9Q13242 221 aaKnown RBP eCLIP10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 MUC4Q99102 2169 aa10.85□□□□□ -0.67
PPP4R3A-201ENST00000554308 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 A0A0J9YX75 114 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 ASIPP42127 132 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 CFAP126Q5VTH2 177 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 TMEM61Q8N0U2 210 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 RAX2Q96IS3 184 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 JPT2Q9H910 190 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 LY6G6DO95868 133 aa10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 RNASE1P07998 156 aaKnown RBP10.84□□□□□ -0.67
PPP4R3A-201ENST00000554308 RNASE3P12724 160 aaKnown RBP10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 UBE2D1P51668 147 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 FOXI1Q12951 378 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 SPINK13Q1W4C9 94 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 SYT8Q8NBV8 401 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 FN1P02751 2386 aaKnown RBP10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 IGLV4-69A0A075B6H9 119 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 KLLNB2CW77 178 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 TSPEAR-AS2P59090 65 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 RPL39P62891 51 aaKnown RBP10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 DYNLRB2Q8TF09 96 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 C1QTNF4Q9BXJ3 329 aa10.83□□□□□ -0.68
PPP4R3A-201ENST00000554308 NOTCH3Q9UM47 2321 aa10.82□□□□□ -0.68
PPP4R3A-201ENST00000554308 KNCNA6PVL3 124 aa10.82□□□□□ -0.68
PPP4R3A-201ENST00000554308 DEFB131AP59861 70 aa10.82□□□□□ -0.68
PPP4R3A-201ENST00000554308 FAM159AQ6UWV7 190 aa10.82□□□□□ -0.68
PPP4R3A-201ENST00000554308 CDIP1Q9H305 208 aa10.82□□□□□ -0.68
PPP4R3A-201ENST00000554308 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
PPP4R3A-201ENST00000554308 VWFP04275 2813 aa10.81□□□□□ -0.68
PPP4R3A-201ENST00000554308 CCL24O00175 119 aa10.81□□□□□ -0.68
PPP4R3A-201ENST00000554308 CD7P09564 240 aa10.81□□□□□ -0.68
PPP4R3A-201ENST00000554308 APRG1Q8IVJ8 170 aa10.81□□□□□ -0.68
PPP4R3A-201ENST00000554308 TRBV7-9A0A0J9YWB2 115 aa10.81□□□□□ -0.68
PPP4R3A-201ENST00000554308 HILS1P60008 231 aa10.81□□□□□ -0.68
PPP4R3A-201ENST00000554308 CLUHP3Q96NS8 147 aa10.81□□□□□ -0.68
PPP4R3A-201ENST00000554308 CKS1BP61024 79 aa10.8□□□□□ -0.68
PPP4R3A-201ENST00000554308 A0A087WWL8 130 aa10.8□□□□□ -0.68
PPP4R3A-201ENST00000554308 A0A0J9YY99 117 aa10.8□□□□□ -0.68
PPP4R3A-201ENST00000554308 A0A1B0GV72 72 aa10.8□□□□□ -0.68
PPP4R3A-201ENST00000554308 LINC00315P59091 139 aa10.8□□□□□ -0.68
PPP4R3A-201ENST00000554308 CARD19Q96LW7 228 aa10.8□□□□□ -0.68
PPP4R3A-201ENST00000554308 TENM1Q9UKZ4 2725 aa10.79□□□□□ -0.68
PPP4R3A-201ENST00000554308 C2CD3Q4AC94 2353 aa10.79□□□□□ -0.68
PPP4R3A-201ENST00000554308 MT-ATP8P03928 68 aa10.79□□□□□ -0.68
PPP4R3A-201ENST00000554308 HTN1P15515 57 aa10.79□□□□□ -0.68
PPP4R3A-201ENST00000554308 UBE2D3P61077 147 aa10.79□□□□□ -0.68
PPP4R3A-201ENST00000554308 UBE2D2P62837 147 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms