RNA–Protein interactions for RNA: ENST00000553990.1

AL390816.1-201, humanhuman

TSL 3 BASIC

Gene AL390816.1, Length 322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.1-201ENST00000553990 PIK3CD-AS1Q5SR53 167 aa3.67□□□□□ -1.82
AL390816.1-201ENST00000553990 DNLZQ5SXM8 178 aa3.67□□□□□ -1.82
AL390816.1-201ENST00000553990 SDIM1Q6ZPB5 146 aa3.67□□□□□ -1.82
AL390816.1-201ENST00000553990 C9orf163Q8N9P6 203 aa3.67□□□□□ -1.82
AL390816.1-201ENST00000553990 INO80EQ8NBZ0 244 aaPredicted RBP3.67□□□□□ -1.82
AL390816.1-201ENST00000553990 DERL1Q9BUN8 251 aa3.67□□□□□ -1.82
AL390816.1-201ENST00000553990 IGLV4-60A0A075B6I1 120 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 A0A087WYN8 130 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 IGKV3OR2-268A0A0C4DH90 116 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 TRBV10-1A0A0K0K1A3 114 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 TRBV6-1A0A0K0K1D8 114 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 G3V3Q6 166 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 PHOX2AO14813 284 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 LTAP01374 205 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 RAB4BP61018 213 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 SERF2P84101 59 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 HIGD2BQ4VC39 106 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 C14orf177Q52M58 125 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 AKR1C8PQ5T2L2 129 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 C20orf203Q8NBC4 194 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 OR10G8Q8NGN5 311 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 STOML3Q8TAV4 291 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 DPH3Q96FX2 82 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 FMC1Q96HJ9 113 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 CHCHD7Q9BUK0 85 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 TPPP3Q9BW30 176 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 ZNF471Q9BX82 626 aaPredicted RBP3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 MED28Q9H204 178 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 RNF213Q63HN8 5207 aa3.66□□□□□ -1.82
AL390816.1-201ENST00000553990 IGKV2-24A0A0C4DH68 120 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 A6NHS1 94 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 SEC11BP0C7V7 166 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 NKX2-5P52952 324 aaPredicted RBP3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 REG3AQ06141 175 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 MIAQ16674 131 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 SPANXN1Q5VSR9 72 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 SUMO4Q6EEV6 95 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 LYPD6BQ8NI32 183 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 HIST1H2BAQ96A08 127 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 CYTL1Q9NRR1 136 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 PRR34Q9NV39 138 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 ZFP30Q9Y2G7 519 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 KIF25-AS1Q9Y6Z4 181 aa3.65□□□□□ -1.83
AL390816.1-201ENST00000553990 TRBV25-1A0A075B6N4 114 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 BORCS7-ASMTA0A0B4J1R7 106 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 ARPC5O15511 151 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 SNAI2O43623 268 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 LINC00299Q6ZSB3 139 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 COX8CQ7Z4L0 72 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 FAM213BQ8TBF2 198 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 SPACA4Q8TDM5 124 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 LINC00526Q96FQ7 95 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 LPAP08519 4548 aa3.64□□□□□ -1.83
AL390816.1-201ENST00000553990 IGHV3-64A0A075B6Q5 118 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 IGHV1-24A0A0C4DH33 117 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 GAGE12HA6NDE8 117 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 GIPP09681 153 aaPredicted RBP3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 COX6A2Q02221 97 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 CIRBPQ14011 172 aaKnown RBP3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 MAJINQ3KP22 176 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 Q6ZRU5 148 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 BAGE2Q86Y30 109 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 GTSF1Q8WW33 167 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 MLST8Q9BVC4 326 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 VAX2Q9UIW0 290 aa3.63□□□□□ -1.83
AL390816.1-201ENST00000553990 A0A096LNI7 61 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 TRAV26-2A0A0B4J265 109 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 A0A0D9SG52 128 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 RAB19A4D1S5 217 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 M0QY20 66 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 OR5AL1P0C617 328 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 SMIM17P0DL12 118 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 CCL20P78556 96 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 PRR3P79522 188 aaKnown RBP3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 IQCJQ1A5X6 159 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 SFT2D1Q8WV19 159 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 AP1S3Q96PC3 154 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 SSBP4Q9BWG4 385 aaPredicted RBP3.62□□□□□ -1.83
AL390816.1-201ENST00000553990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 PFDN1O60925 122 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 CXCL1P09341 107 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 IGLC6P0CF74 106 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 RPL35P42766 123 aaKnown RBP3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 AMTP48728 403 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 SULT1A2P50226 295 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 FOXA3P55318 350 aaPredicted RBP3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 CENPWQ5EE01 88 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 Q6ZNX1 250 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 TMUB2Q71RG4 321 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 KCNRGQ8N5I3 272 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 STPG4Q8N801 248 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 FER1L6-AS1Q8NA97 138 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 OR2D3Q8NGH3 330 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms