RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ZNF90Q03938 601 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 ZNF726P1Q15940 193 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 KHDC3LQ587J8 217 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 IBA57Q5T440 356 aaKnown RBP3.28□□□□□ -1.88
CKAP4-203ENST00000553039 GFI1BQ5VTD9 330 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 RNF185Q96GF1 192 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 GNG13Q9P2W3 67 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 KLF12Q9Y4X4 402 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
CKAP4-203ENST00000553039 MUC2Q02817 5179 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 IGKV1D-37A0A075B6S9 117 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 TRAV26-2A0A0B4J265 109 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 SMIM1B2RUZ4 78 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 F8W036 122 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 HMGB3O15347 200 aaKnown RBP3.27□□□□□ -1.89
CKAP4-203ENST00000553039 APOC3P02656 99 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 SLC25A5P05141 298 aaKnown RBP3.27□□□□□ -1.89
CKAP4-203ENST00000553039 OR5G3P0C626 314 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 STAG3L2P0CL84 134 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 ARL14EPLP0DKL9 152 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 FGF8P55075 233 aaPredicted RBP3.27□□□□□ -1.89
CKAP4-203ENST00000553039 CCL20P78556 96 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 MEF2BQ02080 365 aaPredicted RBP3.27□□□□□ -1.89
CKAP4-203ENST00000553039 GCSAMLQ5JQS6 135 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 ZNF506Q5JVG8 444 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 C10orf113Q5VZT2 155 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 SVBPQ8N300 66 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 C9orf163Q8N9P6 203 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 C11orf72Q8NBR9 251 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 SEC11CQ9BY50 192 aa3.27□□□□□ -1.89
CKAP4-203ENST00000553039 CARHSP1Q9Y2V2 147 aaKnown RBP3.27□□□□□ -1.89
CKAP4-203ENST00000553039 IGKV2D-24A0A075B6R9 120 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 HSBP1L1C9JCN9 74 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 PDE6DO43924 150 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 OR7C2O60412 319 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 NDUFS6O75380 124 aaKnown RBP3.26□□□□□ -1.89
CKAP4-203ENST00000553039 HYPMO75409 117 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 SNAPINO95295 136 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 SNRPCP09234 159 aaKnown RBP3.26□□□□□ -1.89
CKAP4-203ENST00000553039 ADCYAP1P18509 176 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 ORM2P19652 201 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 GCHFRP30047 84 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 CEBPGP53567 150 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 UBE2L3P68036 154 aaKnown RBP3.26□□□□□ -1.89
CKAP4-203ENST00000553039 ELOBQ15370 118 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 PRR4Q16378 134 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 SDIM1Q6ZPB5 146 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 MIR17HGQ75NE6 70 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 LINC00305Q7Z4B0 112 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 ZNF664Q8N3J9 261 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 SUN5Q8TC36 379 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 GTSF1Q8WW33 167 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 ZNF479Q96JC4 524 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 ODF3Q96PU9 254 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 PRADC1Q9BSG0 188 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 GTSF1LQ9H1H1 148 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 PPDPFQ9H3Y8 114 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 TMEM167BQ9NRX6 74 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 HIGD1AQ9Y241 93 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 URGCP-MRPS24S4R325 110 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 ARL2-SNX15V9GYD0 113 aa3.26□□□□□ -1.89
CKAP4-203ENST00000553039 C7orf71A4D174 169 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 C9JQL5 133 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 F6UZH7 168 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 TMEM250H0YL14 139 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 H7C1H1 209 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 EIF3GO75821 320 aaKnown RBP eCLIP3.25□□□□□ -1.89
CKAP4-203ENST00000553039 SRP19P09132 144 aaKnown RBP3.25□□□□□ -1.89
CKAP4-203ENST00000553039 LINC01547P58512 204 aaPredicted RBP3.25□□□□□ -1.89
CKAP4-203ENST00000553039 UBE2G2P60604 165 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 RPL19P84098 196 aaKnown RBP3.25□□□□□ -1.89
CKAP4-203ENST00000553039 Q0VG73 95 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 C10orf91Q5T1B1 145 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 CYB561D1Q8N8Q1 229 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 RASL10AQ92737 203 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 LINC00479Q96M42 142 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 SLC25A2Q9BXI2 301 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 NKX6-2Q9C056 277 aaPredicted RBP3.25□□□□□ -1.89
CKAP4-203ENST00000553039 OR51M1Q9H341 326 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 MRPL16Q9NX20 251 aaKnown RBP3.25□□□□□ -1.89
CKAP4-203ENST00000553039 PSORS1C2Q9UIG4 136 aa3.25□□□□□ -1.89
CKAP4-203ENST00000553039 TNXBP22105 4242 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 IGHV1OR15-1A0A075B7D0 117 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 A0A087WWC5 75 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 A0A1W2PRE2 83 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 ZNF727A8MUV8 499 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 H3BRN7 92 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 M0R036 132 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 PHOX2AO14813 284 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 ATP5LO75964 103 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 GPX1P07203 203 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 OR10J4P0C629 311 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 CT45A10P0DMU9 189 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 GATA1P15976 413 aaPredicted RBP3.24□□□□□ -1.89
CKAP4-203ENST00000553039 RNASE4P34096 147 aaKnown RBP3.24□□□□□ -1.89
CKAP4-203ENST00000553039 RHEBQ15382 184 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 MUC21Q5SSG8 566 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 PATE2Q6UY27 113 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms