RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 C9JQL5 133 aa17.61■□□□□ 0.41
CPSF6-205ENST00000550075 ADIRFQ15847 76 aa17.61■□□□□ 0.41
CPSF6-205ENST00000550075 TNP2Q05952 138 aa17.6■□□□□ 0.41
CPSF6-205ENST00000550075 TSKUQ8WUA8 353 aa17.6■□□□□ 0.41
CPSF6-205ENST00000550075 ISOC2Q96AB3 205 aa17.6■□□□□ 0.41
CPSF6-205ENST00000550075 GFRA4Q9GZZ7 299 aa17.6■□□□□ 0.41
CPSF6-205ENST00000550075 FAM231BA6NCW3 169 aa17.59■□□□□ 0.41
CPSF6-205ENST00000550075 RPL23P62829 140 aaKnown RBP17.59■□□□□ 0.41
CPSF6-205ENST00000550075 SUMO4Q6EEV6 95 aa17.58■□□□□ 0.4
CPSF6-205ENST00000550075 PGLYRP4Q96LB8 373 aa17.58■□□□□ 0.4
CPSF6-205ENST00000550075 DNAJC30Q96LL9 226 aa17.58■□□□□ 0.4
CPSF6-205ENST00000550075 FOXA3P55318 350 aaPredicted RBP17.57■□□□□ 0.4
CPSF6-205ENST00000550075 TMEM97Q5BJF2 176 aa17.57■□□□□ 0.4
CPSF6-205ENST00000550075 TNFRSF18Q9Y5U5 241 aa17.57■□□□□ 0.4
CPSF6-205ENST00000550075 URGCP-MRPS24S4R325 110 aa17.57■□□□□ 0.4
CPSF6-205ENST00000550075 M0QY20 66 aa17.56■□□□□ 0.4
CPSF6-205ENST00000550075 IGHV3-30P01768 117 aa17.56■□□□□ 0.4
CPSF6-205ENST00000550075 IGHV3-33P01772 117 aa17.56■□□□□ 0.4
CPSF6-205ENST00000550075 IGHV3-30-3P0DP02 117 aa17.56■□□□□ 0.4
CPSF6-205ENST00000550075 IGHV3-30-5P0DP03 117 aa17.56■□□□□ 0.4
CPSF6-205ENST00000550075 DAZ4Q86SG3 579 aaKnown RBP17.56■□□□□ 0.4
CPSF6-205ENST00000550075 DAZ3Q9NR90 486 aaKnown RBP17.56■□□□□ 0.4
CPSF6-205ENST00000550075 HIGD1CA8MV81 97 aa17.55■□□□□ 0.4
CPSF6-205ENST00000550075 RASL11AQ6T310 242 aa17.55■□□□□ 0.4
CPSF6-205ENST00000550075 V9GYV3 84 aa17.55■□□□□ 0.4
CPSF6-205ENST00000550075 CLLU1Q5K131 121 aa17.54■□□□□ 0.4
CPSF6-205ENST00000550075 KCNIP4Q6PIL6 250 aa17.54■□□□□ 0.4
CPSF6-205ENST00000550075 Q6ZRN7 208 aaPredicted RBP17.54■□□□□ 0.4
CPSF6-205ENST00000550075 A0A1B0GUT8 65 aa17.53■□□□□ 0.4
CPSF6-205ENST00000550075 IBA57-AS1B1ANH7 110 aa17.53■□□□□ 0.4
CPSF6-205ENST00000550075 LAGE3Q14657 143 aa17.53■□□□□ 0.4
CPSF6-205ENST00000550075 TRBV6-8A0A0A6YYG3 113 aa17.52■□□□□ 0.4
CPSF6-205ENST00000550075 CHCHD7Q9BUK0 85 aa17.52■□□□□ 0.4
CPSF6-205ENST00000550075 PKIAP61925 76 aa17.51■□□□□ 0.39
CPSF6-205ENST00000550075 NIT1Q86X76 327 aa17.51■□□□□ 0.39
CPSF6-205ENST00000550075 NIT2Q9NQR4 276 aa17.51■□□□□ 0.39
CPSF6-205ENST00000550075 A0A087WX48 190 aa17.5■□□□□ 0.39
CPSF6-205ENST00000550075 FRZBQ92765 325 aa17.5■□□□□ 0.39
CPSF6-205ENST00000550075 EREGO14944 169 aa17.49■□□□□ 0.39
CPSF6-205ENST00000550075 Q9HAA7 133 aa17.49■□□□□ 0.39
CPSF6-205ENST00000550075 NAT8BQ9UHF3 227 aa17.49■□□□□ 0.39
CPSF6-205ENST00000550075 PKD1P98161 4303 aa17.47■□□□□ 0.39
CPSF6-205ENST00000550075 RIGQ13278 110 aa17.47■□□□□ 0.39
CPSF6-205ENST00000550075 ELOBQ15370 118 aa17.47■□□□□ 0.39
CPSF6-205ENST00000550075 TRBV25-1A0A075B6N4 114 aa17.46■□□□□ 0.39
CPSF6-205ENST00000550075 PSCAO43653 123 aa17.46■□□□□ 0.39
CPSF6-205ENST00000550075 Q8N3U1 123 aa17.46■□□□□ 0.39
CPSF6-205ENST00000550075 NUP35Q8NFH5 326 aa17.46■□□□□ 0.39
CPSF6-205ENST00000550075 CHCHD5Q9BSY4 110 aa17.46■□□□□ 0.39
CPSF6-205ENST00000550075 PKHD1P08F94 4074 aa17.46■□□□□ 0.38
CPSF6-205ENST00000550075 TRAV8-3A0A0A6YYJ7 113 aa17.45■□□□□ 0.38
CPSF6-205ENST00000550075 IFITM2Q01629 132 aa17.45■□□□□ 0.38
CPSF6-205ENST00000550075 GATD1Q8NB37 220 aa17.45■□□□□ 0.38
CPSF6-205ENST00000550075 TMEM191AQ9H0A3 160 aa17.45■□□□□ 0.38
CPSF6-205ENST00000550075 IGHV1-24A0A0C4DH33 117 aa17.44■□□□□ 0.38
CPSF6-205ENST00000550075 TMEM262E9PQX1 116 aa17.44■□□□□ 0.38
CPSF6-205ENST00000550075 PNRC1Q12796 327 aaPredicted RBP17.44■□□□□ 0.38
CPSF6-205ENST00000550075 TM2D2Q9BX73 214 aa17.44■□□□□ 0.38
CPSF6-205ENST00000550075 TRAV26-2A0A0B4J265 109 aa17.43■□□□□ 0.38
CPSF6-205ENST00000550075 SMIM27A0A1W2PRY6 76 aa17.43■□□□□ 0.38
CPSF6-205ENST00000550075 PPP1R2P9O14990 202 aa17.41■□□□□ 0.38
CPSF6-205ENST00000550075 IQCJQ1A5X6 159 aa17.41■□□□□ 0.38
CPSF6-205ENST00000550075 NTM-AS1Q6ZSK4 140 aa17.41■□□□□ 0.38
CPSF6-205ENST00000550075 SPATA12Q7Z6I5 190 aa17.41■□□□□ 0.38
CPSF6-205ENST00000550075 RMI2Q96E14 147 aa17.41■□□□□ 0.38
CPSF6-205ENST00000550075 COTL1Q14019 142 aa17.4■□□□□ 0.38
CPSF6-205ENST00000550075 UQCC3Q6UW78 93 aa17.4■□□□□ 0.38
CPSF6-205ENST00000550075 KLK12Q9UKR0 248 aa17.4■□□□□ 0.38
CPSF6-205ENST00000550075 A0A1B0GW15 77 aa17.39■□□□□ 0.37
CPSF6-205ENST00000550075 C16orf90A8MZG2 172 aa17.39■□□□□ 0.37
CPSF6-205ENST00000550075 COX11Q9Y6N1 276 aa17.39■□□□□ 0.37
CPSF6-205ENST00000550075 DNAH11Q96DT5 4516 aa17.38■□□□□ 0.37
CPSF6-205ENST00000550075 A0A087WTM6 91 aa17.38■□□□□ 0.37
CPSF6-205ENST00000550075 RPL39LQ96EH5 51 aaKnown RBP17.38■□□□□ 0.37
CPSF6-205ENST00000550075 MRAP2Q96G30 205 aa17.38■□□□□ 0.37
CPSF6-205ENST00000550075 TMEM243Q9BU79 118 aa17.38■□□□□ 0.37
CPSF6-205ENST00000550075 CRPP02741 224 aa17.37■□□□□ 0.37
CPSF6-205ENST00000550075 S100A8P05109 93 aa17.37■□□□□ 0.37
CPSF6-205ENST00000550075 MPV17L2Q567V2 206 aa17.37■□□□□ 0.37
CPSF6-205ENST00000550075 Q0VG73 95 aa17.36■□□□□ 0.37
CPSF6-205ENST00000550075 GAGE6Q13070 117 aa17.36■□□□□ 0.37
CPSF6-205ENST00000550075 UBE2WQ96B02 151 aa17.36■□□□□ 0.37
CPSF6-205ENST00000550075 MT-ND4LP03901 98 aa17.35■□□□□ 0.37
CPSF6-205ENST00000550075 AMTP48728 403 aa17.35■□□□□ 0.37
CPSF6-205ENST00000550075 AMN1Q8IY45 258 aa17.35■□□□□ 0.37
CPSF6-205ENST00000550075 TRBV6-5A0A0K0K1A5 114 aa17.34■□□□□ 0.37
CPSF6-205ENST00000550075 SDHAF1A6NFY7 115 aa17.34■□□□□ 0.37
CPSF6-205ENST00000550075 ANGP03950 147 aaKnown RBP17.34■□□□□ 0.37
CPSF6-205ENST00000550075 RAB4AP20338 218 aa17.34■□□□□ 0.37
CPSF6-205ENST00000550075 ATRAIDQ6UW56 229 aa17.34■□□□□ 0.37
CPSF6-205ENST00000550075 RNF185Q96GF1 192 aa17.34■□□□□ 0.37
CPSF6-205ENST00000550075 UBE2L6O14933 153 aa17.33■□□□□ 0.36
CPSF6-205ENST00000550075 NCR2O95944 276 aa17.33■□□□□ 0.36
CPSF6-205ENST00000550075 CAMPP49913 170 aa17.33■□□□□ 0.36
CPSF6-205ENST00000550075 ANAPC16Q96DE5 110 aa17.33■□□□□ 0.36
CPSF6-205ENST00000550075 ST20Q9HBF5 79 aa17.33■□□□□ 0.36
CPSF6-205ENST00000550075 DYNC1H1Q14204 4646 aaKnown RBP17.32■□□□□ 0.36
CPSF6-205ENST00000550075 PPP1R17O96001 155 aa17.32■□□□□ 0.36
CPSF6-205ENST00000550075 KRTAP10-2P60368 255 aa17.32■□□□□ 0.36
CPSF6-205ENST00000550075 RBX1P62877 108 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms