RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 Q8N8P6 123 aa0.98□□□□□ -2.25
SNRPF-202ENST00000549580 PPP3R2Q96LZ3 170 aa0.98□□□□□ -2.25
SNRPF-202ENST00000549580 PHIPQ8WWQ0 1821 aa0.98□□□□□ -2.25
SNRPF-202ENST00000549580 KIAA0100Q14667 2235 aaKnown RBP0.97□□□□□ -2.25
SNRPF-202ENST00000549580 ZDBF2Q9HCK1 2354 aa0.97□□□□□ -2.25
SNRPF-202ENST00000549580 EIF4G3O43432 1585 aaKnown RBP0.97□□□□□ -2.25
SNRPF-202ENST00000549580 PEG3Q9GZU2 1588 aa0.97□□□□□ -2.25
SNRPF-202ENST00000549580 PARP14Q460N5 1801 aa0.97□□□□□ -2.25
SNRPF-202ENST00000549580 A0A087WTM6 91 aa0.97□□□□□ -2.25
SNRPF-202ENST00000549580 SPAARA0A1B0GVQ0 90 aa0.97□□□□□ -2.25
SNRPF-202ENST00000549580 F2Z2F3 143 aa0.97□□□□□ -2.25
SNRPF-202ENST00000549580 CATR1Q13166 79 aa0.97□□□□□ -2.25
SNRPF-202ENST00000549580 KTN1Q86UP2 1357 aaKnown RBP0.96□□□□□ -2.26
SNRPF-202ENST00000549580 LOC285556D6RIA3 1793 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 RBBP6Q7Z6E9 1792 aaKnown RBP0.96□□□□□ -2.26
SNRPF-202ENST00000549580 TRAV13-2A0A0B4J235 113 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 A0A0D9SG42 100 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 HCG22E2RYF7 251 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 F6UZH7 168 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 SIX6O95475 246 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 EDDM3BP56851 147 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 MRPS10P82664 201 aaKnown RBP0.96□□□□□ -2.26
SNRPF-202ENST00000549580 INSL4Q14641 139 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 MRPL54Q6P161 138 aaKnown RBP0.96□□□□□ -2.26
SNRPF-202ENST00000549580 LINC00312Q9Y6C7 94 aa0.96□□□□□ -2.26
SNRPF-202ENST00000549580 A2ML1A8K2U0 1454 aa0.95□□□□□ -2.26
SNRPF-202ENST00000549580 MAP2P11137 1827 aaKnown RBP0.95□□□□□ -2.26
SNRPF-202ENST00000549580 CORTO00230 105 aa0.95□□□□□ -2.26
SNRPF-202ENST00000549580 TNFP01375 233 aa0.95□□□□□ -2.26
SNRPF-202ENST00000549580 GNG4P50150 75 aa0.95□□□□□ -2.26
SNRPF-202ENST00000549580 TPPP2P59282 170 aa0.95□□□□□ -2.26
SNRPF-202ENST00000549580 WHAMMP3Q1A5X7 153 aa0.95□□□□□ -2.26
SNRPF-202ENST00000549580 C8orf59Q8N0T1 100 aaPredicted RBP0.95□□□□□ -2.26
SNRPF-202ENST00000549580 AQP10Q96PS8 301 aa0.95□□□□□ -2.26
SNRPF-202ENST00000549580 CLPSL1A2RUU4 121 aa0.94□□□□□ -2.26
SNRPF-202ENST00000549580 SPANXDQ9BXN6 97 aa0.94□□□□□ -2.26
SNRPF-202ENST00000549580 BPESC1Q9GZL8 116 aa0.94□□□□□ -2.26
SNRPF-202ENST00000549580 SCP2D1Q9UJQ7 156 aa0.94□□□□□ -2.26
SNRPF-202ENST00000549580 CASKIN1Q8WXD9 1431 aa0.94□□□□□ -2.26
SNRPF-202ENST00000549580 NWD2Q9ULI1 1742 aa0.94□□□□□ -2.26
SNRPF-202ENST00000549580 S100A1P23297 94 aa0.93□□□□□ -2.26
SNRPF-202ENST00000549580 C9orf153Q5TBE3 101 aa0.93□□□□□ -2.26
SNRPF-202ENST00000549580 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.93□□□□□ -2.26
SNRPF-202ENST00000549580 Q96NJ1 140 aa0.93□□□□□ -2.26
SNRPF-202ENST00000549580 IER3IP1Q9Y5U9 82 aa0.93□□□□□ -2.26
SNRPF-202ENST00000549580 KNTC1P50748 2209 aa0.93□□□□□ -2.26
SNRPF-202ENST00000549580 ARFGEF1Q9Y6D6 1849 aa0.92□□□□□ -2.26
SNRPF-202ENST00000549580 SMIM6P0DI80 62 aa0.92□□□□□ -2.26
SNRPF-202ENST00000549580 ACYP2P14621 99 aa0.92□□□□□ -2.26
SNRPF-202ENST00000549580 PPP3R1P63098 170 aa0.92□□□□□ -2.26
SNRPF-202ENST00000549580 LRRC37A3O60309 1634 aa0.92□□□□□ -2.26
SNRPF-202ENST00000549580 TANC1Q9C0D5 1861 aa0.92□□□□□ -2.26
SNRPF-202ENST00000549580 MYOM2P54296 1465 aa0.92□□□□□ -2.26
SNRPF-202ENST00000549580 FAM135AQ9P2D6 1515 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 TRGV1A0A0A0MS02 117 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 C10orf128Q5T292 105 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 SMIM11BQ8TCY0 68 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 WFDC6Q9BQY6 131 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 PRR15LQ9BU68 103 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 ABCA1O95477 2261 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 CUL7Q14999 1698 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 QRICH2Q9H0J4 1663 aa0.91□□□□□ -2.26
SNRPF-202ENST00000549580 CPSF1Q10570 1443 aaKnown RBP0.9□□□□□ -2.26
SNRPF-202ENST00000549580 CDK13Q14004 1512 aaKnown RBP0.9□□□□□ -2.26
SNRPF-202ENST00000549580 ARAP2Q8WZ64 1704 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 GVQW2A0A096LPI5 108 aaPredicted RBP0.9□□□□□ -2.27
SNRPF-202ENST00000549580 OOSP1A8MZH6 123 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 SSSCA1O60232 199 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 S100PP25815 95 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 VMO1Q7Z5L0 202 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 C5orf38Q86SI9 138 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 TTC9CQ8N5M4 171 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 C10orf95Q9H7T3 257 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 MED13LQ71F56 2210 aa0.9□□□□□ -2.27
SNRPF-202ENST00000549580 TNS1Q9HBL0 1735 aaKnown RBP0.89□□□□□ -2.27
SNRPF-202ENST00000549580 FAM24AA6NFZ4 105 aa0.89□□□□□ -2.27
SNRPF-202ENST00000549580 SPATA8Q6RVD6 105 aa0.89□□□□□ -2.27
SNRPF-202ENST00000549580 SVBPQ8N300 66 aa0.89□□□□□ -2.27
SNRPF-202ENST00000549580 CYP4F30PQ9H0H9 118 aa0.89□□□□□ -2.27
SNRPF-202ENST00000549580 PATJQ8NI35 1801 aa0.89□□□□□ -2.27
SNRPF-202ENST00000549580 PPIP5K1Q6PFW1 1433 aa0.89□□□□□ -2.27
SNRPF-202ENST00000549580 RIMS1Q86UR5 1692 aaKnown RBP0.88□□□□□ -2.27
SNRPF-202ENST00000549580 PXDNQ92626 1479 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 TMEM14DPA8MWL7 114 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 PPP1R17O96001 155 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 SPINK7P58062 85 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 COMMD6Q7Z4G1 85 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 BAGE3Q86Y29 109 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 CGREF1Q99674 301 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 FAM103A1Q9BTL3 118 aaKnown RBP0.88□□□□□ -2.27
SNRPF-202ENST00000549580 R4GMQ9 66 aa0.88□□□□□ -2.27
SNRPF-202ENST00000549580 SIPA1L3O60292 1781 aaPredicted RBP0.88□□□□□ -2.27
SNRPF-202ENST00000549580 TRAV1-2A0A0B4J238 106 aa0.87□□□□□ -2.27
SNRPF-202ENST00000549580 C20orf202A1L168 122 aa0.87□□□□□ -2.27
SNRPF-202ENST00000549580 MYH8P13535 1937 aa0.86□□□□□ -2.27
SNRPF-202ENST00000549580 UBE2L5PA0A1B0GUS4 154 aa0.86□□□□□ -2.27
SNRPF-202ENST00000549580 UBE2L3P68036 154 aaKnown RBP0.86□□□□□ -2.27
SNRPF-202ENST00000549580 Q6ZRX8 168 aa0.86□□□□□ -2.27
SNRPF-202ENST00000549580 GTF2H5Q6ZYL4 71 aa0.86□□□□□ -2.27
SNRPF-202ENST00000549580 MYOZ3Q8TDC0 251 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms