RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 ZFP2Q6ZN57 461 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 OR4C5Q8NGB2 326 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 MAP1LC3AQ9H492 121 aa12.31□□□□□ -0.44
HDAC7-227ENST00000548080 IGHV3-73A0A0B4J1V6 119 aa12.3□□□□□ -0.44
HDAC7-227ENST00000548080 TRAV4A0A0B4J268 109 aa12.3□□□□□ -0.44
HDAC7-227ENST00000548080 LOC389332A0A1B0GUA5 103 aa12.3□□□□□ -0.44
HDAC7-227ENST00000548080 SPART-AS1P0CW21 52 aa12.3□□□□□ -0.44
HDAC7-227ENST00000548080 ESDP10768 282 aa12.3□□□□□ -0.44
HDAC7-227ENST00000548080 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
HDAC7-227ENST00000548080 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
HDAC7-227ENST00000548080 CEMP1Q6PRD7 247 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-227ENST00000548080 RPL39LQ96EH5 51 aaKnown RBP12.29□□□□□ -0.44
HDAC7-227ENST00000548080 URB1-AS1Q96HZ7 61 aa12.29□□□□□ -0.44
HDAC7-227ENST00000548080 DYNC2H1Q8NCM8 4307 aaKnown RBP12.29□□□□□ -0.44
HDAC7-227ENST00000548080 TRGV2A0A075B6R0 118 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 LYRM9A8MSI8 78 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 M0QY20 66 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 LINC00614P0C842 121 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 DEFB130BP0DP73 79 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 DEFB130AP0DP74 79 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 S100A2P29034 98 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 IFI27P40305 119 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-227ENST00000548080 RNASEKQ6P5S7 137 aaKnown RBP12.28□□□□□ -0.44
HDAC7-227ENST00000548080 LINC00612Q8N6U2 182 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 CHCHD1Q96BP2 118 aaKnown RBP12.28□□□□□ -0.44
HDAC7-227ENST00000548080 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 NACAE9PAV3 2078 aa12.28□□□□□ -0.44
HDAC7-227ENST00000548080 NUPR2A6NF83 97 aa12.27□□□□□ -0.44
HDAC7-227ENST00000548080 H7C1H1 209 aa12.27□□□□□ -0.44
HDAC7-227ENST00000548080 CIDEAO60543 219 aa12.27□□□□□ -0.44
HDAC7-227ENST00000548080 HTN3P15516 51 aa12.27□□□□□ -0.44
HDAC7-227ENST00000548080 DAD1P61803 113 aa12.27□□□□□ -0.44
HDAC7-227ENST00000548080 FA2HQ7L5A8 372 aa12.27□□□□□ -0.44
HDAC7-227ENST00000548080 ZNF479Q96JC4 524 aa12.27□□□□□ -0.44
HDAC7-227ENST00000548080 PLECQ15149 4684 aaKnown RBP12.26□□□□□ -0.45
HDAC7-227ENST00000548080 HSBP1O75506 76 aa12.26□□□□□ -0.45
HDAC7-227ENST00000548080 IGHV3-53P01767 116 aa12.26□□□□□ -0.45
HDAC7-227ENST00000548080 SUMO2P61956 95 aaKnown RBP12.26□□□□□ -0.45
HDAC7-227ENST00000548080 Q6ZSN1 163 aa12.26□□□□□ -0.45
HDAC7-227ENST00000548080 NXT2Q9NPJ8 142 aaKnown RBP12.26□□□□□ -0.45
HDAC7-227ENST00000548080 NIT2Q9NQR4 276 aa12.26□□□□□ -0.45
HDAC7-227ENST00000548080 KMT2CQ8NEZ4 4911 aaKnown RBP12.26□□□□□ -0.45
HDAC7-227ENST00000548080 DEFB131BA0A096LNP1 70 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 TRBV6-5A0A0K0K1A5 114 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 IFITM10A6NMD0 228 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 PMCHP20382 165 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 Q8N8P6 123 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 TMEM18Q96B42 140 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 LYSTQ99698 3801 aa12.25□□□□□ -0.45
HDAC7-227ENST00000548080 IGLV2-18A0A075B6J9 118 aa12.24□□□□□ -0.45
HDAC7-227ENST00000548080 TRAV10A0A0B4J240 114 aa12.24□□□□□ -0.45
HDAC7-227ENST00000548080 RPL32P62910 135 aaKnown RBP12.24□□□□□ -0.45
HDAC7-227ENST00000548080 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
HDAC7-227ENST00000548080 SMIM2Q9BVW6 85 aa12.24□□□□□ -0.45
HDAC7-227ENST00000548080 AP5S1Q9NUS5 200 aa12.24□□□□□ -0.45
HDAC7-227ENST00000548080 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
HDAC7-227ENST00000548080 LINC01546A6NGU7 62 aa12.23□□□□□ -0.45
HDAC7-227ENST00000548080 IGLL5B9A064 214 aa12.23□□□□□ -0.45
HDAC7-227ENST00000548080 FABP4P15090 132 aa12.23□□□□□ -0.45
HDAC7-227ENST00000548080 KLK5Q9Y337 293 aaPredicted RBP12.23□□□□□ -0.45
HDAC7-227ENST00000548080 AMTP48728 403 aa12.22□□□□□ -0.45
HDAC7-227ENST00000548080 FAM19A2Q8N3H0 131 aa12.22□□□□□ -0.45
HDAC7-227ENST00000548080 PACRGQ96M98 296 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-227ENST00000548080 P0DMU3 169 aa12.21□□□□□ -0.45
HDAC7-227ENST00000548080 FAM231AP0DMU4 169 aa12.21□□□□□ -0.45
HDAC7-227ENST00000548080 FAM231CP0DMU5 169 aa12.21□□□□□ -0.45
HDAC7-227ENST00000548080 POLR2KP53803 58 aaKnown RBP12.21□□□□□ -0.45
HDAC7-227ENST00000548080 TRGV4A0A0C4DH28 118 aa12.21□□□□□ -0.46
HDAC7-227ENST00000548080 SDHAF1A6NFY7 115 aa12.21□□□□□ -0.46
HDAC7-227ENST00000548080 VCYO14598 125 aa12.21□□□□□ -0.46
HDAC7-227ENST00000548080 DNAJC30Q96LL9 226 aa12.21□□□□□ -0.46
HDAC7-227ENST00000548080 TMEM70Q9BUB7 260 aa12.21□□□□□ -0.46
HDAC7-227ENST00000548080 FHL2Q14192 279 aa12.2□□□□□ -0.46
HDAC7-227ENST00000548080 PMCHL1Q16048 86 aa12.2□□□□□ -0.46
HDAC7-227ENST00000548080 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
HDAC7-227ENST00000548080 ALMS1Q8TCU4 4167 aa12.2□□□□□ -0.46
HDAC7-227ENST00000548080 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
HDAC7-227ENST00000548080 K7EQD1 137 aa12.19□□□□□ -0.46
HDAC7-227ENST00000548080 AKR1D1P51857 326 aa12.19□□□□□ -0.46
HDAC7-227ENST00000548080 NEXN-AS1Q8NBZ9 246 aa12.19□□□□□ -0.46
HDAC7-227ENST00000548080 TRBV10-1A0A0K0K1A3 114 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 TRBV6-4A0A1B0GX49 114 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 K7EMI3 77 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 LAGE3Q14657 143 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 NEGR1Q7Z3B1 354 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 SLC25A29Q8N8R3 303 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 OR10D4PQ8NGN7 298 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 Q9UF83 564 aa12.18□□□□□ -0.46
HDAC7-227ENST00000548080 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
HDAC7-227ENST00000548080 F5H768 121 aa12.17□□□□□ -0.46
HDAC7-227ENST00000548080 TCAPO15273 167 aa12.17□□□□□ -0.46
HDAC7-227ENST00000548080 ORMDL2Q53FV1 153 aa12.16□□□□□ -0.46
HDAC7-227ENST00000548080 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
HDAC7-227ENST00000548080 APLNQ9ULZ1 77 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms