RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 KMT2BQ9UMN6 2715 aaPredicted RBP13.59□□□□□ -0.23
CCT4-204ENST00000544079 A0A0J9YXV3 536 aa13.59□□□□□ -0.23
CCT4-204ENST00000544079 NPFFO15130 113 aa13.59□□□□□ -0.23
CCT4-204ENST00000544079 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
CCT4-204ENST00000544079 CLEC2BQ92478 149 aa13.59□□□□□ -0.23
CCT4-204ENST00000544079 IGLV4-3A0A075B6K6 122 aa13.58□□□□□ -0.24
CCT4-204ENST00000544079 F5H697 171 aa13.58□□□□□ -0.24
CCT4-204ENST00000544079 DCANP1Q8TF63 244 aa13.58□□□□□ -0.24
CCT4-204ENST00000544079 PRSS2P07478 247 aa13.57□□□□□ -0.24
CCT4-204ENST00000544079 MUC4Q99102 2169 aa13.57□□□□□ -0.24
CCT4-204ENST00000544079 IGHV3-64A0A075B6Q5 118 aa13.57□□□□□ -0.24
CCT4-204ENST00000544079 HERVK_113P63121 156 aa13.57□□□□□ -0.24
CCT4-204ENST00000544079 MRPS36P82909 103 aaKnown RBP13.57□□□□□ -0.24
CCT4-204ENST00000544079 PYGO1Q9Y3Y4 419 aa13.57□□□□□ -0.24
CCT4-204ENST00000544079 ARHGAP32A7KAX9 2087 aa13.57□□□□□ -0.24
CCT4-204ENST00000544079 IGHV1-58A0A0C4DH39 117 aa13.56□□□□□ -0.24
CCT4-204ENST00000544079 KLLNB2CW77 178 aa13.56□□□□□ -0.24
CCT4-204ENST00000544079 C3orf56Q8N813 242 aa13.56□□□□□ -0.24
CCT4-204ENST00000544079 OPRPNQ99935 248 aaPredicted RBP13.56□□□□□ -0.24
CCT4-204ENST00000544079 MAP1BP46821 2468 aaKnown RBP13.56□□□□□ -0.24
CCT4-204ENST00000544079 M0QY20 66 aa13.56□□□□□ -0.24
CCT4-204ENST00000544079 ADAMTSL4-AS1Q5T5F5 129 aa13.55□□□□□ -0.24
CCT4-204ENST00000544079 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
CCT4-204ENST00000544079 JPT2Q9H910 190 aa13.55□□□□□ -0.24
CCT4-204ENST00000544079 NDUFA12Q9UI09 145 aa13.55□□□□□ -0.24
CCT4-204ENST00000544079 A0A087WWL8 130 aa13.54□□□□□ -0.24
CCT4-204ENST00000544079 COX7CP15954 63 aa13.54□□□□□ -0.24
CCT4-204ENST00000544079 CHD8Q9HCK8 2581 aa13.54□□□□□ -0.24
CCT4-204ENST00000544079 FAM223BA6NKX1 122 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 CRYGAP11844 174 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 CEMP1Q6PRD7 247 aaPredicted RBP13.53□□□□□ -0.24
CCT4-204ENST00000544079 FAM223AQ8IWN6 122 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 PEMTQ9UBM1 199 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 ROS1P08922 2347 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 CFAP47Q6ZTR5 3102 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 SMIM9A6NGZ8 99 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 ZNF580Q9UK33 172 aa13.53□□□□□ -0.24
CCT4-204ENST00000544079 PKDREJQ9NTG1 2253 aa13.52□□□□□ -0.24
CCT4-204ENST00000544079 TRAV8-3A0A0A6YYJ7 113 aa13.52□□□□□ -0.24
CCT4-204ENST00000544079 TMEM219Q86XT9 240 aa13.52□□□□□ -0.24
CCT4-204ENST00000544079 C9orf85Q96MD7 179 aa13.52□□□□□ -0.24
CCT4-204ENST00000544079 SPXQ9BT56 116 aa13.52□□□□□ -0.24
CCT4-204ENST00000544079 NDUFA4O00483 81 aa13.52□□□□□ -0.25
CCT4-204ENST00000544079 WIPF1O43516 503 aa13.52□□□□□ -0.25
CCT4-204ENST00000544079 DEFB104AQ8WTQ1 72 aa13.52□□□□□ -0.25
CCT4-204ENST00000544079 LINC00527Q9UJ94 153 aa13.52□□□□□ -0.25
CCT4-204ENST00000544079 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
CCT4-204ENST00000544079 SMCR5Q8TEV8 140 aa13.51□□□□□ -0.25
CCT4-204ENST00000544079 VSIG2Q96IQ7 327 aa13.51□□□□□ -0.25
CCT4-204ENST00000544079 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.5□□□□□ -0.25
CCT4-204ENST00000544079 G3V318 75 aa13.5□□□□□ -0.25
CCT4-204ENST00000544079 DAND5Q8N907 189 aa13.5□□□□□ -0.25
CCT4-204ENST00000544079 USP24Q9UPU5 2620 aa13.49□□□□□ -0.25
CCT4-204ENST00000544079 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
CCT4-204ENST00000544079 TINCRA0A1B0GVN0 87 aa13.49□□□□□ -0.25
CCT4-204ENST00000544079 ADARB2-AS1A8MUL3 147 aa13.49□□□□□ -0.25
CCT4-204ENST00000544079 COX7A2LO14548 114 aa13.49□□□□□ -0.25
CCT4-204ENST00000544079 HIST1H4AP62805 103 aaKnown RBP13.49□□□□□ -0.25
CCT4-204ENST00000544079 RPL11P62913 178 aaKnown RBP13.48□□□□□ -0.25
CCT4-204ENST00000544079 FAM19A5Q7Z5A7 132 aaPredicted RBP13.48□□□□□ -0.25
CCT4-204ENST00000544079 ATOX1O00244 68 aa13.48□□□□□ -0.25
CCT4-204ENST00000544079 OR13C6PQ8NH95 151 aa13.48□□□□□ -0.25
CCT4-204ENST00000544079 C2orf48Q96LS8 159 aa13.48□□□□□ -0.25
CCT4-204ENST00000544079 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
CCT4-204ENST00000544079 TRACP01848 142 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 LOC107984640A0A0U1RRK4 108 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 F6UB75 175 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 ATP5J2P56134 94 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 DEFB1P60022 68 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 FAM74A4Q5TZK3 123 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 GAGE2AQ6NT46 116 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 Q6ZSV7 163 aa13.47□□□□□ -0.25
CCT4-204ENST00000544079 WNK2Q9Y3S1 2297 aa13.46□□□□□ -0.25
CCT4-204ENST00000544079 CD28P10747 220 aa13.46□□□□□ -0.25
CCT4-204ENST00000544079 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
CCT4-204ENST00000544079 FAM104AQ969W3 186 aa13.46□□□□□ -0.26
CCT4-204ENST00000544079 COPS9Q8WXC6 57 aa13.45□□□□□ -0.26
CCT4-204ENST00000544079 CITED2Q99967 270 aaPredicted RBP13.45□□□□□ -0.26
CCT4-204ENST00000544079 KALRNO60229 2985 aa13.45□□□□□ -0.26
CCT4-204ENST00000544079 SPENQ96T58 3664 aaKnown RBP13.45□□□□□ -0.26
CCT4-204ENST00000544079 INAFM2P0DMQ5 153 aa13.44□□□□□ -0.26
CCT4-204ENST00000544079 UNQ9165/PRO28630Q6UXU0 137 aa13.44□□□□□ -0.26
CCT4-204ENST00000544079 SIRPDQ9H106 197 aa13.44□□□□□ -0.26
CCT4-204ENST00000544079 PRRC2AP48634 2157 aaKnown RBP13.44□□□□□ -0.26
CCT4-204ENST00000544079 DUX5Q96PT3 197 aa13.43□□□□□ -0.26
CCT4-204ENST00000544079 NDUFA1O15239 70 aa13.43□□□□□ -0.26
CCT4-204ENST00000544079 TRAV41A0A0B4J266 112 aa13.42□□□□□ -0.26
CCT4-204ENST00000544079 CIRBPQ14011 172 aaKnown RBP13.42□□□□□ -0.26
CCT4-204ENST00000544079 BEAN1Q3B7T3 259 aa13.42□□□□□ -0.26
CCT4-204ENST00000544079 C5orf56Q8N8D9 126 aa13.42□□□□□ -0.26
CCT4-204ENST00000544079 DAZ2Q13117 558 aaKnown RBP13.42□□□□□ -0.26
CCT4-204ENST00000544079 DAZ4Q86SG3 579 aaKnown RBP13.42□□□□□ -0.26
CCT4-204ENST00000544079 DAZ1Q9NQZ3 744 aaKnown RBP13.42□□□□□ -0.26
CCT4-204ENST00000544079 DAZ3Q9NR90 486 aaKnown RBP13.42□□□□□ -0.26
CCT4-204ENST00000544079 CHD6Q8TD26 2715 aa13.42□□□□□ -0.26
CCT4-204ENST00000544079 CEP295Q9C0D2 2601 aa13.41□□□□□ -0.26
CCT4-204ENST00000544079 KLK5Q9Y337 293 aaPredicted RBP13.41□□□□□ -0.26
CCT4-204ENST00000544079 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms