RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 RPL36AP83881 106 aaKnown RBP9.4□□□□□ -0.9
SP140-213ENST00000543928 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 SVBPQ8N300 66 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 ATP6V0E2Q8NHE4 81 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 ZNRF2Q8NHG8 242 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 RPL36ALQ969Q0 106 aaKnown RBP9.4□□□□□ -0.9
SP140-213ENST00000543928 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
SP140-213ENST00000543928 TRBV7-3A0A075B6L6 115 aa9.39□□□□□ -0.91
SP140-213ENST00000543928 A0A087WWC5 75 aa9.39□□□□□ -0.91
SP140-213ENST00000543928 TRAV26-2A0A0B4J265 109 aa9.39□□□□□ -0.91
SP140-213ENST00000543928 A0A1B0GXF2 115 aa9.39□□□□□ -0.91
SP140-213ENST00000543928 SNAPINO95295 136 aa9.39□□□□□ -0.91
SP140-213ENST00000543928 HBBP68871 147 aa9.39□□□□□ -0.91
SP140-213ENST00000543928 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 S100A8P05109 93 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 UBE2D3P61077 147 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 UBE2D2P62837 147 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 AMN1Q8IY45 258 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 GTSF1LQ9H1H1 148 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
SP140-213ENST00000543928 MRPS16Q9Y3D3 137 aaKnown RBP9.38□□□□□ -0.91
SP140-213ENST00000543928 RAB4AP20338 218 aa9.37□□□□□ -0.91
SP140-213ENST00000543928 DNAJC30Q96LL9 226 aa9.37□□□□□ -0.91
SP140-213ENST00000543928 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
SP140-213ENST00000543928 KMT2AQ03164 3969 aa9.37□□□□□ -0.91
SP140-213ENST00000543928 S100PP25815 95 aa9.36□□□□□ -0.91
SP140-213ENST00000543928 TIRAPP58753 221 aa9.36□□□□□ -0.91
SP140-213ENST00000543928 FAM104BQ5XKR9 115 aa9.36□□□□□ -0.91
SP140-213ENST00000543928 RPL39LQ96EH5 51 aaKnown RBP9.36□□□□□ -0.91
SP140-213ENST00000543928 UPK3BQ9BT76 320 aa9.36□□□□□ -0.91
SP140-213ENST00000543928 NIT2Q9NQR4 276 aa9.36□□□□□ -0.91
SP140-213ENST00000543928 URGCP-MRPS24S4R325 110 aa9.36□□□□□ -0.91
SP140-213ENST00000543928 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
SP140-213ENST00000543928 IGHV3-38A0A0C4DH36 116 aa9.35□□□□□ -0.91
SP140-213ENST00000543928 FRZBQ92765 325 aa9.35□□□□□ -0.91
SP140-213ENST00000543928 MRAP2Q96G30 205 aa9.35□□□□□ -0.91
SP140-213ENST00000543928 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
SP140-213ENST00000543928 GAS8-AS1O95177 125 aa9.34□□□□□ -0.91
SP140-213ENST00000543928 MRPL51Q4U2R6 128 aaKnown RBP9.34□□□□□ -0.91
SP140-213ENST00000543928 LELP1Q5T871 98 aa9.34□□□□□ -0.91
SP140-213ENST00000543928 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.34□□□□□ -0.91
SP140-213ENST00000543928 Q9H8V8 135 aa9.34□□□□□ -0.91
SP140-213ENST00000543928 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
SP140-213ENST00000543928 NCR2O95944 276 aa9.33□□□□□ -0.92
SP140-213ENST00000543928 RPS10P46783 165 aaKnown RBP9.33□□□□□ -0.92
SP140-213ENST00000543928 OR10J3Q5JRS4 329 aa9.33□□□□□ -0.92
SP140-213ENST00000543928 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
SP140-213ENST00000543928 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
SP140-213ENST00000543928 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
SP140-213ENST00000543928 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
SP140-213ENST00000543928 RYR2Q92736 4967 aa9.32□□□□□ -0.92
SP140-213ENST00000543928 TRAV8-6A0A0B4J262 113 aa9.32□□□□□ -0.92
SP140-213ENST00000543928 SIVA1O15304 175 aa9.32□□□□□ -0.92
SP140-213ENST00000543928 HYDINQ4G0P3 5121 aa9.31□□□□□ -0.92
SP140-213ENST00000543928 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
SP140-213ENST00000543928 M0R2N4 97 aa9.31□□□□□ -0.92
SP140-213ENST00000543928 CKS2P33552 79 aa9.31□□□□□ -0.92
SP140-213ENST00000543928 SDHAF1A6NFY7 115 aa9.3□□□□□ -0.92
SP140-213ENST00000543928 D6R8Y8 96 aa9.3□□□□□ -0.92
SP140-213ENST00000543928 TMEM136Q6ZRR5 245 aa9.3□□□□□ -0.92
SP140-213ENST00000543928 NRACQ8N912 160 aa9.3□□□□□ -0.92
SP140-213ENST00000543928 ST20Q9HBF5 79 aa9.3□□□□□ -0.92
SP140-213ENST00000543928 TRBV6-8A0A0A6YYG3 113 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 TGIF2-C20orf24A0A0A6YYL0 155 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 NBDYA0A0U1RRE5 68 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 PPP1R17O96001 155 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 ELOBQ15370 118 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 DEFB104AQ8WTQ1 72 aa9.29□□□□□ -0.92
SP140-213ENST00000543928 PPBPP02775 128 aa9.28□□□□□ -0.92
SP140-213ENST00000543928 DNAH10OSP0CZ25 163 aa9.28□□□□□ -0.92
SP140-213ENST00000543928 ORMDL3Q8N138 153 aa9.28□□□□□ -0.92
SP140-213ENST00000543928 TMEM70Q9BUB7 260 aa9.28□□□□□ -0.92
SP140-213ENST00000543928 RYR3Q15413 4870 aa9.27□□□□□ -0.92
SP140-213ENST00000543928 TNFRSF6BO95407 300 aa9.27□□□□□ -0.93
SP140-213ENST00000543928 HLA-DQA1P01909 254 aa9.27□□□□□ -0.93
SP140-213ENST00000543928 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
SP140-213ENST00000543928 SUMO2P61956 95 aaKnown RBP9.27□□□□□ -0.93
SP140-213ENST00000543928 COTL1Q14019 142 aa9.27□□□□□ -0.93
SP140-213ENST00000543928 COX19Q49B96 90 aa9.27□□□□□ -0.93
SP140-213ENST00000543928 Q6ZR54 194 aa9.27□□□□□ -0.93
SP140-213ENST00000543928 GNB1LQ9BYB4 327 aa9.27□□□□□ -0.93
SP140-213ENST00000543928 KRTAP1-5Q9BYS1 174 aa9.27□□□□□ -0.93
SP140-213ENST00000543928 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 IGHV1-24A0A0C4DH33 117 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 I3L3M4 83 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 NPYP01303 97 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 PMCHP20382 165 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 TTC32Q5I0X7 151 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 LINC01556Q5JQF7 62 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms