RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NFE4Q86UQ8 179 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 WFDC10BQ8IUB3 73 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 CBLN2Q8IUK8 224 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 NUDT10Q8NFP7 164 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 NUDT11Q96G61 164 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 RPP21Q9H633 154 aaKnown RBP6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 V9GYV3 84 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
TNFRSF1A-214ENST00000543048 RHODO00212 210 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 CXCL1P09341 107 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 S100PP25815 95 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 OR10J3Q5JRS4 329 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 Q6ZRN7 208 aaPredicted RBP6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 ZFP82Q8N141 532 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 C10orf126Q8N4M7 172 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 IMMP2LQ96T52 175 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 MSRB1Q9NZV6 116 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 TNFRSF18Q9Y5U5 241 aa6.6□□□□□ -1.35
TNFRSF1A-214ENST00000543048 IGHV3-38A0A0C4DH36 116 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 C16orf90A8MZG2 172 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 M0R381 172 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 CRYGDP07320 174 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 RPS20P60866 119 aaKnown RBP6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GAGE1Q13065 139 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GAGE4Q13068 117 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GAGE5Q13069 117 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 LELP1Q5T871 98 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 KCNIP4Q6PIL6 250 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 SPATA12Q7Z6I5 190 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 C14orf178Q8N769 122 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 OR2D3Q8NGH3 330 aa6.59□□□□□ -1.35
TNFRSF1A-214ENST00000543048 TRAV9-1A0A075B6T8 112 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 A0A087WWL8 130 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 XKRY2A2RUG3 117 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 A8MWL6 223 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 FAM74A4Q5TZK3 123 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 TSKUQ8WUA8 353 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 GFRA4Q9GZZ7 299 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 Q9UF83 564 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 URGCP-MRPS24S4R325 110 aa6.58□□□□□ -1.36
TNFRSF1A-214ENST00000543048 SMIM27A0A1W2PRY6 76 aa6.57□□□□□ -1.36
TNFRSF1A-214ENST00000543048 FAM231BA6NCW3 169 aa6.57□□□□□ -1.36
TNFRSF1A-214ENST00000543048 SNAI2O43623 268 aa6.57□□□□□ -1.36
TNFRSF1A-214ENST00000543048 OR5AL1P0C617 328 aa6.57□□□□□ -1.36
TNFRSF1A-214ENST00000543048 LINC00694P0DN24 101 aa6.57□□□□□ -1.36
TNFRSF1A-214ENST00000543048 YPEL4Q96NS1 127 aa6.57□□□□□ -1.36
TNFRSF1A-214ENST00000543048 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
TNFRSF1A-214ENST00000543048 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 TRBV10-1A0A0K0K1A3 114 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 HIGD1CA8MV81 97 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 IBA57-AS1B1ANH7 110 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 KRTAP10-2P60368 255 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 RAB4BP61018 213 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 ELOBQ15370 118 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 SPANXN1Q5VSR9 72 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 OR10AG1Q8NH19 301 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 BTF3L4Q96K17 158 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 RYR1P21817 5038 aa6.56□□□□□ -1.36
TNFRSF1A-214ENST00000543048 TRBV24-1A0A075B6N3 115 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 TGIF2-C20orf24A0A0A6YYL0 155 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 MUC21A0A0G2JKD1 596 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 MUC21A0A140T8X8 626 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 IGHV3-30P01768 117 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 IGHV3-33P01772 117 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 IGHV3-30-3P0DP02 117 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 IGHV3-30-5P0DP03 117 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 GZMBP10144 247 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 RPL36AP83881 106 aaKnown RBP6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 FER1L6-AS1Q8NA97 138 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 GTSF1Q8WW33 167 aa6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 RPL36ALQ969Q0 106 aaKnown RBP6.55□□□□□ -1.36
TNFRSF1A-214ENST00000543048 TRBV7-3A0A075B6L6 115 aa6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 A0A087WTM6 91 aa6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 COLCA2A8K830 154 aa6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 IGLC6P0CF74 106 aa6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 CTRLP40313 264 aa6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 FOXA3P55318 350 aaPredicted RBP6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 SSTP61278 116 aa6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 NUP35Q8NFH5 326 aa6.54□□□□□ -1.36
TNFRSF1A-214ENST00000543048 F2Z2F3 143 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 F5H697 171 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 PSCAO43653 123 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 CDK2AP2O75956 126 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 SMIM17P0DL12 118 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 UBE2D3P61077 147 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 UBE2D2P62837 147 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 CACNG7P62955 275 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 ZNF56Q15929 161 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 ATP5L2Q7Z4Y8 100 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 BORCS7Q96B45 105 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 PGLYRP4Q96LB8 373 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms