RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	KCNIP4	Q6PIL6	250 aa		10.52	□□□□□ -0.73
DDX11-222	ENST00000542777	SCX	Q7RTU7	201 aa		10.52	□□□□□ -0.73
DDX11-222	ENST00000542777	ZFP82	Q8N141	532 aa		10.52	□□□□□ -0.73
DDX11-222	ENST00000542777	RPL36AL	Q969Q0	106 aa	Known RBP	10.52	□□□□□ -0.73
DDX11-222	ENST00000542777	FAM210A	Q96ND0	272 aa		10.52	□□□□□ -0.73
DDX11-222	ENST00000542777	CHCHD7	Q9BUK0	85 aa		10.52	□□□□□ -0.73
DDX11-222	ENST00000542777	TRBV10-1	A0A0K0K1A3	114 aa		10.51	□□□□□ -0.73
DDX11-222	ENST00000542777		C9JQL5	133 aa		10.51	□□□□□ -0.73
DDX11-222	ENST00000542777	IGLV2-8	P01709	118 aa		10.51	□□□□□ -0.73
DDX11-222	ENST00000542777	UBE2D3	P61077	147 aa		10.5	□□□□□ -0.73
DDX11-222	ENST00000542777	UBE2D2	P62837	147 aa		10.5	□□□□□ -0.73
DDX11-222	ENST00000542777		Q0VG73	95 aa		10.5	□□□□□ -0.73
DDX11-222	ENST00000542777	CHAC1	Q9BUX1	264 aa		10.5	□□□□□ -0.73
DDX11-222	ENST00000542777	MED9	Q9NWA0	146 aa		10.5	□□□□□ -0.73
DDX11-222	ENST00000542777	TRBV7-3	A0A075B6L6	115 aa		10.49	□□□□□ -0.73
DDX11-222	ENST00000542777	TMEM262	E9PQX1	116 aa		10.49	□□□□□ -0.73
DDX11-222	ENST00000542777	SRP19	P09132	144 aa	Known RBP	10.49	□□□□□ -0.73
DDX11-222	ENST00000542777	CENPW	Q5EE01	88 aa		10.49	□□□□□ -0.73
DDX11-222	ENST00000542777	ATRAID	Q6UW56	229 aa		10.49	□□□□□ -0.73
DDX11-222	ENST00000542777	MLST8	Q9BVC4	326 aa		10.49	□□□□□ -0.73
DDX11-222	ENST00000542777	PDE6D	O43924	150 aa		10.48	□□□□□ -0.73
DDX11-222	ENST00000542777	BAGE2	Q86Y30	109 aa		10.48	□□□□□ -0.73
DDX11-222	ENST00000542777	EIF5A2	Q9GZV4	153 aa	Known RBP	10.48	□□□□□ -0.73
DDX11-222	ENST00000542777	TRBV6-8	A0A0A6YYG3	113 aa		10.47	□□□□□ -0.73
DDX11-222	ENST00000542777	TAGLN2	P37802	199 aa	Known RBP	10.47	□□□□□ -0.73
DDX11-222	ENST00000542777	OR10G8	Q8NGN5	311 aa		10.47	□□□□□ -0.73
DDX11-222	ENST00000542777	CIRBP-AS1	Q8TBR5	109 aa		10.47	□□□□□ -0.73
DDX11-222	ENST00000542777	C1orf43	Q9BWL3	253 aa		10.47	□□□□□ -0.73
DDX11-222	ENST00000542777	S100A9	P06702	114 aa	Known RBP	10.46	□□□□□ -0.73
DDX11-222	ENST00000542777	CEBPG	P53567	150 aa		10.46	□□□□□ -0.73
DDX11-222	ENST00000542777	RAB4B	P61018	213 aa		10.46	□□□□□ -0.73
DDX11-222	ENST00000542777	C14orf177	Q52M58	125 aa		10.46	□□□□□ -0.73
DDX11-222	ENST00000542777	ENHO	Q6UWT2	76 aa		10.46	□□□□□ -0.73
DDX11-222	ENST00000542777	NEXN-AS1	Q8NBZ9	246 aa		10.46	□□□□□ -0.73
DDX11-222	ENST00000542777	TMEM250	H0YL14	139 aa		10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	CRP	P02741	224 aa		10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	KRTAP10-4	P60372	401 aa	Predicted RBP	10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	RPL19	P84098	196 aa	Known RBP	10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	ZNF56	Q15929	161 aa		10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	CLLU1	Q5K131	121 aa		10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	PRR27	Q6MZM9	219 aa		10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	C15orf54	Q8N8G6	183 aa		10.45	□□□□□ -0.74
DDX11-222	ENST00000542777	OR10AG1	Q8NH19	301 aa		10.45	□□□□□ -0.74
DDX11-222	ENST00000542777		K7EN84	100 aa		10.44	□□□□□ -0.74
DDX11-222	ENST00000542777	MPV17L2	Q567V2	206 aa		10.44	□□□□□ -0.74
DDX11-222	ENST00000542777	ANG	P03950	147 aa	Known RBP	10.43	□□□□□ -0.74
DDX11-222	ENST00000542777	CXCL1	P09341	107 aa		10.43	□□□□□ -0.74
DDX11-222	ENST00000542777	GNG4	P50150	75 aa		10.43	□□□□□ -0.74
DDX11-222	ENST00000542777	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX11-222	ENST00000542777	OCC1	Q8TAD7	63 aa		10.43	□□□□□ -0.74
DDX11-222	ENST00000542777	CHCHD5	Q9BSY4	110 aa		10.43	□□□□□ -0.74
DDX11-222	ENST00000542777	SPANXN1	Q5VSR9	72 aa		10.42	□□□□□ -0.74
DDX11-222	ENST00000542777	LRP1	Q07954	4544 aa	Known RBP	10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	MUC21	A0A0G2JKD1	596 aa		10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	MUC21	A0A140T8X8	626 aa		10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	USP17L23	D6RBM5	183 aa		10.41	□□□□□ -0.74
DDX11-222	ENST00000542777		F5H697	171 aa		10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	SNAI2	O43623	268 aa		10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	RAB14	P61106	215 aa		10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	PKIA	P61925	76 aa		10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.41	□□□□□ -0.74
DDX11-222	ENST00000542777	C19orf71	A6NCJ1	209 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	NDUFS6	O75380	124 aa	Known RBP	10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	OXT	P01178	125 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	HLA-DQA1	P01909	254 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	OR5AL1	P0C617	328 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	SST	P61278	116 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	MIA	Q16674	131 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	SERTAD4-AS1	Q5TG53	156 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	SMIM7	Q9BQ49	75 aa		10.4	□□□□□ -0.74
DDX11-222	ENST00000542777	GZMB	P10144	247 aa		10.39	□□□□□ -0.75
DDX11-222	ENST00000542777	TMEM97	Q5BJF2	176 aa		10.39	□□□□□ -0.75
DDX11-222	ENST00000542777	NTM-AS1	Q6ZSK4	140 aa		10.39	□□□□□ -0.75
DDX11-222	ENST00000542777	ZNF727	A8MUV8	499 aa		10.38	□□□□□ -0.75
DDX11-222	ENST00000542777	PRSS1	P07477	247 aa		10.38	□□□□□ -0.75
DDX11-222	ENST00000542777	SMIM17	P0DL12	118 aa		10.38	□□□□□ -0.75
DDX11-222	ENST00000542777	PEA15	Q15121	130 aa		10.38	□□□□□ -0.75
DDX11-222	ENST00000542777	RNASE7	Q9H1E1	156 aa	Known RBP	10.38	□□□□□ -0.75
DDX11-222	ENST00000542777	FAT3	Q8TDW7	4589 aa		10.38	□□□□□ -0.75
DDX11-222	ENST00000542777	RPL37A	P61513	92 aa	Known RBP	10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	RBX1	P62877	108 aa		10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	GAGE6	Q13070	117 aa		10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	DGAT2L7P	Q6IED9	249 aa		10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	NUDT10	Q8NFP7	164 aa		10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	SMIM12	Q96EX1	92 aa		10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	NUDT11	Q96G61	164 aa		10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	KIF25-AS1	Q9Y6Z4	181 aa		10.37	□□□□□ -0.75
DDX11-222	ENST00000542777	CLPSL2	Q6UWE3	100 aa		10.36	□□□□□ -0.75
DDX11-222	ENST00000542777	LINC01551	Q86U37	167 aa		10.36	□□□□□ -0.75
DDX11-222	ENST00000542777	LINC00269	Q8N2A0	174 aa		10.36	□□□□□ -0.75
DDX11-222	ENST00000542777	C9orf163	Q8N9P6	203 aa		10.36	□□□□□ -0.75
DDX11-222	ENST00000542777	PRR34	Q9NV39	138 aa		10.36	□□□□□ -0.75
DDX11-222	ENST00000542777	TRBV25-1	A0A075B6N4	114 aa		10.35	□□□□□ -0.75
DDX11-222	ENST00000542777	RPL23	P62829	140 aa	Known RBP	10.35	□□□□□ -0.75
DDX11-222	ENST00000542777	KRTAP26-1	Q6PEX3	210 aa		10.35	□□□□□ -0.75
DDX11-222	ENST00000542777	OR2D3	Q8NGH3	330 aa		10.35	□□□□□ -0.75
DDX11-222	ENST00000542777	AP1S3	Q96PC3	154 aa		10.35	□□□□□ -0.75
DDX11-222	ENST00000542777	COMMD7	Q86VX2	200 aa		10.34	□□□□□ -0.75
DDX11-222	ENST00000542777	SMDT1	Q9H4I9	107 aa		10.34	□□□□□ -0.75
DDX11-222	ENST00000542777	IGHV1-24	A0A0C4DH33	117 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms