RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-222ENST00000542777 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
DDX11-222ENST00000542777 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
DDX11-222ENST00000542777 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
DDX11-222ENST00000542777 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
DDX11-222ENST00000542777 MT4P47944 62 aa5.74□□□□□ -1.49
DDX11-222ENST00000542777 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
DDX11-222ENST00000542777 MT1MQ8N339 61 aa5.72□□□□□ -1.49
DDX11-222ENST00000542777 A6NED7 52 aa5.7□□□□□ -1.5
DDX11-222ENST00000542777 MT1LQ93083 61 aa5.69□□□□□ -1.5
DDX11-222ENST00000542777 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
DDX11-222ENST00000542777 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
DDX11-222ENST00000542777 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
DDX11-222ENST00000542777 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
DDX11-222ENST00000542777 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
DDX11-222ENST00000542777 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
DDX11-222ENST00000542777 TNP1P09430 55 aa5.54□□□□□ -1.52
DDX11-222ENST00000542777 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
DDX11-222ENST00000542777 K7ERS5 55 aa5.52□□□□□ -1.53
DDX11-222ENST00000542777 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
DDX11-222ENST00000542777 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
DDX11-222ENST00000542777 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
DDX11-222ENST00000542777 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
DDX11-222ENST00000542777 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
DDX11-222ENST00000542777 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
DDX11-222ENST00000542777 ROMO1P60602 79 aa5.31□□□□□ -1.56
DDX11-222ENST00000542777 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
DDX11-222ENST00000542777 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
DDX11-222ENST00000542777 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
DDX11-222ENST00000542777 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
DDX11-222ENST00000542777 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
DDX11-222ENST00000542777 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
DDX11-222ENST00000542777 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
DDX11-222ENST00000542777 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
DDX11-222ENST00000542777 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
DDX11-222ENST00000542777 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
DDX11-222ENST00000542777 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
DDX11-222ENST00000542777 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
DDX11-222ENST00000542777 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
DDX11-222ENST00000542777 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
DDX11-222ENST00000542777 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
DDX11-222ENST00000542777 MT1AP04731 61 aa4.83□□□□□ -1.64
DDX11-222ENST00000542777 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
DDX11-222ENST00000542777 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
DDX11-222ENST00000542777 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
DDX11-222ENST00000542777 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
DDX11-222ENST00000542777 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
DDX11-222ENST00000542777 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
DDX11-222ENST00000542777 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
DDX11-222ENST00000542777 AHNAKQ09666 5890 aaKnown RBP4.59□□□□□ -1.67
DDX11-222ENST00000542777 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
DDX11-222ENST00000542777 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
DDX11-222ENST00000542777 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
DDX11-222ENST00000542777 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
DDX11-222ENST00000542777 MT3P25713 68 aa4.44□□□□□ -1.7
DDX11-222ENST00000542777 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
DDX11-222ENST00000542777 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
DDX11-222ENST00000542777 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
DDX11-222ENST00000542777 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
DDX11-222ENST00000542777 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
DDX11-222ENST00000542777 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
DDX11-222ENST00000542777 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
DDX11-222ENST00000542777 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
DDX11-222ENST00000542777 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
DDX11-222ENST00000542777 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
DDX11-222ENST00000542777 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
DDX11-222ENST00000542777 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
DDX11-222ENST00000542777 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
DDX11-222ENST00000542777 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
DDX11-222ENST00000542777 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
DDX11-222ENST00000542777 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
DDX11-222ENST00000542777 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
DDX11-222ENST00000542777 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
DDX11-222ENST00000542777 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
DDX11-222ENST00000542777 PRM1P04553 51 aa2.78□□□□□ -1.96
DDX11-222ENST00000542777 INE1O15225 51 aa2.75□□□□□ -1.97
DDX11-222ENST00000542777 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
DDX11-222ENST00000542777 H3BS24 57 aa2.12□□□□□ -2.07
DDX11-222ENST00000542777 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 156 ms