RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PPBPP02775 128 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 GYPEP15421 78 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 HTN3P15516 51 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 POLR2KP53803 58 aaKnown RBP4.07□□□□□ -1.76
ABCF1-207ENST00000542772 TIRAPP58753 221 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 UBE2D3P61077 147 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 UBE2D2P62837 147 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 MRPL51Q4U2R6 128 aaKnown RBP4.07□□□□□ -1.76
ABCF1-207ENST00000542772 LYPD5Q6UWN5 251 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 SH2D6Q7Z4S9 175 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 NEXN-AS1Q8NBZ9 246 aa4.07□□□□□ -1.76
ABCF1-207ENST00000542772 A0A0J9YY99 117 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 LOC100131303A0A0U1RQF7 123 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 PHOX2AO14813 284 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 GAS8-AS1O95177 125 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 HLA-DQA1P01909 254 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 MT-ND6P03923 174 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 P0DMU3 169 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 FAM231AP0DMU4 169 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 FAM231CP0DMU5 169 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 RPL32P62910 135 aaKnown RBP4.06□□□□□ -1.76
ABCF1-207ENST00000542772 RPL36AP83881 106 aaKnown RBP4.06□□□□□ -1.76
ABCF1-207ENST00000542772 ZNF56Q15929 161 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 ESRGQ1W209 222 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 NEGR1Q7Z3B1 354 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 CBLN2Q8IUK8 224 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 NRACQ8N912 160 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 ZNRF2Q8NHG8 242 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 RPL36ALQ969Q0 106 aaKnown RBP4.06□□□□□ -1.76
ABCF1-207ENST00000542772 ICOSQ9Y6W8 199 aa4.06□□□□□ -1.76
ABCF1-207ENST00000542772 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 TRAV26-2A0A0B4J265 109 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 TNFRSF6BO95407 300 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 MGPP08493 103 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 CKS2P33552 79 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 ZFAND6Q6FIF0 208 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 DAZ4Q86SG3 579 aaKnown RBP4.05□□□□□ -1.76
ABCF1-207ENST00000542772 ATP6V0E2Q8NHE4 81 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
ABCF1-207ENST00000542772 C20orf78Q9BR46 151 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 GTSF1LQ9H1H1 148 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 DAZ3Q9NR90 486 aaKnown RBP4.05□□□□□ -1.76
ABCF1-207ENST00000542772 LAMTOR2Q9Y2Q5 125 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 TRAPPC1Q9Y5R8 145 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 TNFRSF18Q9Y5U5 241 aa4.05□□□□□ -1.76
ABCF1-207ENST00000542772 IGLV2-18A0A075B6J9 118 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 GAGE12JA6NER3 117 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 D6R8Y8 96 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 VCYO14598 125 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 NUDT3O95989 172 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 APCSP02743 223 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 SRIP30626 198 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 RPS10P46783 165 aaKnown RBP4.04□□□□□ -1.76
ABCF1-207ENST00000542772 RAB5BP61020 215 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 GAGE1Q13065 139 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 GAGE4Q13068 117 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 GAGE5Q13069 117 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 GAGE13Q4V321 117 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 TMEM97Q5BJF2 176 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 OR10J3Q5JRS4 329 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 LGALS9CQ6DKI2 356 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 NTM-AS1Q6ZSK4 140 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 ORMDL3Q8N138 153 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 PRELID3AQ96N28 172 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 ALKBH7Q9BT30 221 aaPredicted RBP4.04□□□□□ -1.76
ABCF1-207ENST00000542772 UPK3BQ9BT76 320 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 TMEM70Q9BUB7 260 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 MRPL18Q9H0U6 180 aaKnown RBP4.04□□□□□ -1.76
ABCF1-207ENST00000542772 ST20Q9HBF5 79 aa4.04□□□□□ -1.76
ABCF1-207ENST00000542772 VPS13DQ5THJ4 4388 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 TRBV6-8A0A0A6YYG3 113 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 SDHAF1A6NFY7 115 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 LINC01546A6NGU7 62 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 C1orf196B1AJZ1 125 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 SMKR1H3BMG3 65 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 NCR2O95944 276 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 NPYP01303 97 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 RAB5AP20339 215 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 CCL18P55774 89 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 SUMO2P61956 95 aaKnown RBP4.03□□□□□ -1.76
ABCF1-207ENST00000542772 FABP9Q0Z7S8 132 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 KIAA1644Q3SXP7 199 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 LELP1Q5T871 98 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 LINC00588Q9Y4M8 146 aa4.03□□□□□ -1.76
ABCF1-207ENST00000542772 LYSTQ99698 3801 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 DNAH1Q9P2D7 4330 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 I3L3M4 83 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 K7EMI3 77 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 TRGC2P03986 189 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 S100A6P06703 90 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 ESDP10768 282 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 PMCHP20382 165 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 IQCJQ1A5X6 159 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 Q8N8P6 123 aa4.02□□□□□ -1.77
ABCF1-207ENST00000542772 MRPS16Q9Y3D3 137 aaKnown RBP4.02□□□□□ -1.77
ABCF1-207ENST00000542772 IGHV3-38A0A0C4DH36 116 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 H7C423 109 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 K7EP13 123 aa4.01□□□□□ -1.77
ABCF1-207ENST00000542772 TCAPO15273 167 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms