RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 FSTL3O95633 263 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 VPREB3Q9UKI3 123 aa12.22□□□□□ -0.45
VARS2-212ENST00000542001 TTC32Q5I0X7 151 aa12.21□□□□□ -0.45
VARS2-212ENST00000542001 ZNF493Q6ZR52 646 aa12.21□□□□□ -0.45
VARS2-212ENST00000542001 I3L3M4 83 aa12.21□□□□□ -0.46
VARS2-212ENST00000542001 FGF6P10767 208 aa12.21□□□□□ -0.46
VARS2-212ENST00000542001 LINC00158P58513 81 aa12.21□□□□□ -0.46
VARS2-212ENST00000542001 PRIMA1Q86XR5 153 aa12.21□□□□□ -0.46
VARS2-212ENST00000542001 DAND5Q8N907 189 aa12.21□□□□□ -0.46
VARS2-212ENST00000542001 ZFP2Q6ZN57 461 aa12.21□□□□□ -0.46
VARS2-212ENST00000542001 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
VARS2-212ENST00000542001 M0R2P5 195 aa12.2□□□□□ -0.46
VARS2-212ENST00000542001 AVPP01185 164 aa12.2□□□□□ -0.46
VARS2-212ENST00000542001 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
VARS2-212ENST00000542001 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
VARS2-212ENST00000542001 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
VARS2-212ENST00000542001 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
VARS2-212ENST00000542001 DNAL4O96015 105 aa12.19□□□□□ -0.46
VARS2-212ENST00000542001 TMEM61Q8N0U2 210 aa12.19□□□□□ -0.46
VARS2-212ENST00000542001 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
VARS2-212ENST00000542001 CFAP46Q8IYW2 2715 aa12.19□□□□□ -0.46
VARS2-212ENST00000542001 CLPSL2Q6UWE3 100 aa12.19□□□□□ -0.46
VARS2-212ENST00000542001 MRPL53Q96EL3 112 aaKnown RBP12.18□□□□□ -0.46
VARS2-212ENST00000542001 U3KQE9 123 aa12.18□□□□□ -0.46
VARS2-212ENST00000542001 ANAPC13Q9BS18 74 aa12.18□□□□□ -0.46
VARS2-212ENST00000542001 GATA3P23771 443 aa12.18□□□□□ -0.46
VARS2-212ENST00000542001 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
VARS2-212ENST00000542001 RASL10AQ92737 203 aa12.18□□□□□ -0.46
VARS2-212ENST00000542001 NDUFA12Q9UI09 145 aa12.18□□□□□ -0.46
VARS2-212ENST00000542001 PLEKHB2Q96CS7 222 aa12.17□□□□□ -0.46
VARS2-212ENST00000542001 ESM1Q9NQ30 184 aa12.17□□□□□ -0.46
VARS2-212ENST00000542001 SNCGO76070 127 aa12.17□□□□□ -0.46
VARS2-212ENST00000542001 LGALS1P09382 135 aaKnown RBP12.16□□□□□ -0.46
VARS2-212ENST00000542001 PFN2P35080 140 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 GAGE6Q13070 117 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 ZFAND2AQ8N6M9 145 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 ZNF48Q96MX3 618 aaPredicted RBP12.16□□□□□ -0.46
VARS2-212ENST00000542001 A6NDX4 124 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 IGLL5B9A064 214 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 Q8N6K4 173 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 PTH2Q96A98 100 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 NOP10Q9NPE3 64 aaKnown RBP12.16□□□□□ -0.46
VARS2-212ENST00000542001 EBI3Q14213 229 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 LENEPQ9Y5L5 61 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 CLPSL1A2RUU4 121 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 PROK1P58294 105 aa12.16□□□□□ -0.46
VARS2-212ENST00000542001 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.46
VARS2-212ENST00000542001 TRBV6-1A0A0K0K1D8 114 aa12.15□□□□□ -0.46
VARS2-212ENST00000542001 MRPS12O15235 138 aaKnown RBP12.15□□□□□ -0.46
VARS2-212ENST00000542001 ELANEP08246 267 aa12.15□□□□□ -0.47
VARS2-212ENST00000542001 DMDP11532 3685 aa12.14□□□□□ -0.47
VARS2-212ENST00000542001 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
VARS2-212ENST00000542001 PAX4O43316 350 aa12.14□□□□□ -0.47
VARS2-212ENST00000542001 C18orf65Q6ZTR6 163 aa12.14□□□□□ -0.47
VARS2-212ENST00000542001 ATP6V0BQ99437 205 aa12.14□□□□□ -0.47
VARS2-212ENST00000542001 SRSF2Q01130 221 aaKnown RBP12.14□□□□□ -0.47
VARS2-212ENST00000542001 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
VARS2-212ENST00000542001 TNRC6BQ9UPQ9 1833 aaKnown RBP12.13□□□□□ -0.47
VARS2-212ENST00000542001 C2orf91Q6ZV80 131 aa12.13□□□□□ -0.47
VARS2-212ENST00000542001 MUC4Q99102 2169 aa12.13□□□□□ -0.47
VARS2-212ENST00000542001 TMEM141Q96I45 108 aa12.12□□□□□ -0.47
VARS2-212ENST00000542001 PRO1854Q9UHT4 67 aa12.12□□□□□ -0.47
VARS2-212ENST00000542001 A4D1N5 150 aa12.12□□□□□ -0.47
VARS2-212ENST00000542001 TSPAN13O95857 204 aa12.12□□□□□ -0.47
VARS2-212ENST00000542001 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
VARS2-212ENST00000542001 SIVA1O15304 175 aa12.11□□□□□ -0.47
VARS2-212ENST00000542001 FOXI2Q6ZQN5 318 aa12.11□□□□□ -0.47
VARS2-212ENST00000542001 A0A0J9YX75 114 aa12.11□□□□□ -0.47
VARS2-212ENST00000542001 NXPH4O95158 308 aa12.11□□□□□ -0.47
VARS2-212ENST00000542001 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
VARS2-212ENST00000542001 H3BUA1 57 aa12.1□□□□□ -0.47
VARS2-212ENST00000542001 CCL24O00175 119 aa12.1□□□□□ -0.47
VARS2-212ENST00000542001 C6orf226Q5I0X4 101 aa12.1□□□□□ -0.47
VARS2-212ENST00000542001 FLNAP21333 2647 aaKnown RBP12.1□□□□□ -0.47
VARS2-212ENST00000542001 FLNCQ14315 2725 aa12.1□□□□□ -0.47
VARS2-212ENST00000542001 DEFB4AO15263 64 aa12.09□□□□□ -0.47
VARS2-212ENST00000542001 A0A096LNJ9 63 aa12.09□□□□□ -0.47
VARS2-212ENST00000542001 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
VARS2-212ENST00000542001 GPHB5Q86YW7 130 aa12.08□□□□□ -0.48
VARS2-212ENST00000542001 MALP21145 153 aa12.08□□□□□ -0.48
VARS2-212ENST00000542001 DEFB113Q30KQ7 82 aa12.08□□□□□ -0.48
VARS2-212ENST00000542001 MUSTN1Q8IVN3 82 aa12.08□□□□□ -0.48
VARS2-212ENST00000542001 TOMM6Q96B49 74 aa12.08□□□□□ -0.48
VARS2-212ENST00000542001 LAMA5O15230 3695 aa12.08□□□□□ -0.48
VARS2-212ENST00000542001 A8MZ25 164 aa12.07□□□□□ -0.48
VARS2-212ENST00000542001 MORN3Q6PF18 240 aaPredicted RBP12.07□□□□□ -0.48
VARS2-212ENST00000542001 A0A0J9YY99 117 aa12.07□□□□□ -0.48
VARS2-212ENST00000542001 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
VARS2-212ENST00000542001 KRTAP10-9P60411 292 aa12.07□□□□□ -0.48
VARS2-212ENST00000542001 ATRQ13535 2644 aa12.07□□□□□ -0.48
VARS2-212ENST00000542001 IGHG4P01861 327 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 NRACQ8N912 160 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 WFDC11Q8NEX6 87 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 RS1O15537 224 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 NTN5Q8WTR8 489 aaPredicted RBP12.06□□□□□ -0.48
VARS2-212ENST00000542001 PRORYQ9H606 182 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 Q9H8V8 135 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 RHODO00212 210 aa12.06□□□□□ -0.48
VARS2-212ENST00000542001 ITPR3Q14573 2671 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms